EST translation and GO annotation for unigene RU20048


ESTScan predicted protein sequence

MADDDYNEMDIGYEDEPVEPEIEEGAGEDVDNNDDLAGDAIETDDKEEQVPVERPRKTSKFMTKYERARILGTRAVQISMNAPVMVELEG
ETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN

ESTScan predicted coding region in original sequence      Start : 203 End : 628 Strand : minus

GGGGTCAAAATCCAAATACTTAAAGCCCTAGCTCTTCTGTCTCTCTCTCTCCATTTATTCGCTCTCCCTGGTTCGCGTTCCTTCCTGGCT
TTACTCTGCAACCATAAATATTAGGGCTTCTGATTCACAGGAAGCTGAGTGATATTTTGCAGAGCAAGGTCGTGCTTGGGGATTAGAAAA
GAGGCTTTTTAACCAATTAACAATGGCTGATGATGATTACAATGAGATGGATATTGGATATGAGGATGAGCCCGTGGAGCCAGAGATTGA
AGAAGGAGCAGGGGAGGATGTGGATAACAATGATGATCTTGCTGGAGATGCCATTGAAACTGATGACAAGGAAGAACAAGTACCAGTGGA
ACGGCCTCGCAAAACATCAAAATTTATGACCAAATATGAACGGGCTAGAATCTTGGGTACCCGTGCTGTACAAATTAGCATGAATGCCCC
TGTGATGGTTGAGTTGGAGGGTGAGACTGACCCGCTTGAGATTGCTATGAAGGAGCTTCGTGAGCGGAAGATACCCTTTACCATCCGCCG
CTACTTGCCTGATGGAAGTTATGAAGATTGGGGAGTTGATGAACTGATTGTGGAAGATTCCTGGAAGAGGCAGGTGGGAGGTAACTGAAT
GTCAAAACAAGGAAAATGTTTTGTGCTCGATCTTGTTCGGAGGATCTTGCTCATGTCATTTGTGTTTTGGCACTGGCCCTATGAACTACA
TGTCAAAACACTATTATGTCAGTATGTTTGAAACGTTGGTGTATGCTGCTTTTATGTCAAATATGTGCTAGGTTGGCAGTTGAGTAGTGG
TTATTATTGAATCTATATGCATGTACACAAAATTCAAACCAATTGCTTTGGCTCAGGGCAAGCCTTCATAAAA


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF01192    RNA polymerase Rpb6

        GO:0003677     GO:0003677

        GO:0003899     GO:0003899

        GO:0006351     GO:0006351

GO terms for RU20048 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006351-transcription, DNA-dependent
GO Molecular Function
   GO:0003677-DNA binding
  GO:0003899-DNA-directed RNA polymerase activity
  GO:0016740-transferase activity
  GO:0016779-nucleotidyltransferase activity
GO Cellular Component
   GO:0030880-RNA polymerase complex