EST translation and GO annotation for unigene RU20380


ESTScan predicted protein sequence

MGQQSLIYSFVARGTVILAEFTEFTGNFTSIAAQCLQKLPATNNKFTYNCDGHTFNYLVDNGFTYCVVAVEALGRQVPIAFLERIKEDFT
NRYGGGKAATAVANSLNKEFGPKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQG
TQMRRKMWLQNMKIKLIVLGILIALILIIVLLFAKVSTVVDESVDSFEEFGGVSTAVIYSAGLRLIIFGYTLHLLA


ESTScan predicted coding region in original sequence      Start : 172 End : 943 Strand : minus

GCACGAGCAACAACACCCCCCATTTCCTCTTTCTCTCTCTCTTATTCTCTCACAATCACCAGACCCCTCCGCCTCCTCCTCCTCCTCCGC
CCCTCTCTGAAACTCGAAAGCTCTACCGTCTCGTCTCTCTCTCTCTCCTAGGGTTAGGGCTTTCGCGGCAATCGGAATCCGATGGGGCAG
CAGTCGTTGATCTACAGCTTCGTGGCGCGTGGGACGGTGATTCTCGCCGAGTTCACCGAATTCACCGGCAACTTCACCAGCATAGCTGCT
CAGTGCCTCCAGAAGCTTCCCGCCACTAACAACAAGTTCACCTACAACTGCGACGGCCACACCTTCAACTACCTCGTCGATAATGGCTTC
ACGTACTGTGTAGTTGCAGTTGAGGCTCTTGGTCGACAAGTTCCTATTGCCTTCCTTGAGCGAATCAAGGAGGATTTTACCAATAGATAT
GGTGGAGGAAAAGCTGCAACGGCAGTTGCAAATAGTCTGAACAAGGAATTTGGGCCCAAGCTGAAGGAGCATATGCAATATTGTGTGGAT
CACCCCGAGGAGATCAGCAAACTTGCTAAAGTGAAAGCTCAGGTCTCAGAAGTCAAAGGAGTTATGATGGAAAATATTGAGAAGGTTCTT
GATCGTGGGGAAAAGATAGAACTTCTGGTAGACAAAACAGAGAACCTTCGCTCACAGGCACAAGATTTCAGGCAGCAGGGAACCCAGATG
AGGAGGAAGATGTGGTTGCAGAACATGAAGATCAAGCTGATAGTTTTGGGAATCTTAATCGCCTTGATTCTCATCATTGTTCTTCTGTTT
GCAAAGGTTTCAACTGTGGTGGATGAATCTGTAGACTCTTTTGAGGAATTTGGTGGAGTTTCTACTGCTGTTATCTACAGCGCCGGTCTA
CGTCTTATTATTTTTGGTTACACACTCCACCTTCTGGCATAA
TTCCTATATTGAAAGACAAGCTTGTATAGTTTGTATCCGTGAATTCTT
TTCTATATTAGTCTCTTGGATGTGTGAATGGTTTTTGATTCCCCTTGTTCCATTGAACTTGCGATGTAGCAGAGAGAAATGGCAAATCAT
TGTGATTGGTTTCAGATTTGTTATTCAACCATAGCCAGGTGGATCATAGG


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00957    Synaptobrevin

        GO:0016021     GO:0016021

        GO:0016192     GO:0016192

GO terms for RU20380 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
  GO:0006810-transport
  GO:0016192-vesicle-mediated transport
GO Molecular Function
GO Cellular Component
  GO:0016020-membrane
  GO:0016021-integral to membrane