Rose Transcriptome Database

EST translation and GO annotation for unigene RU20819

ESTScan predicted protein sequence

XHEEKHKKKHLPLSMASSSSLKAISTFTTPSKTPPPPSSSSSKASLLSFLNNTSSPISLKLSHSIPRSHIRGNHSTLSLAVTNALNTVQS
SSPVSTSGDRTKLPSSNAKPTILVSEKLGEAGLEVLRKFGNLECAYNLTPEELCSKISACDALIVRSGTKVNRQVFEASKGRLKVVGRAG
VGIDNVDLQAATEFGCLVVNAPTANTVAAAEHGIALLTSMARNVAQADASMKAGLWKRNKYVGVSLVGK

ESTScan predicted coding region in original sequence Start : 1 End : 745 Strand : plus

XXGCACGAGGAAAAACACAAGAAGAAACACCTCCCACTTTCCATGGCTTCTTCTTCTTCTCTCAAAGCCATCTCCACCTTCACCACCCCT
TCAAAAACACCACCACCTCCCTCATCATCATCATCAAAAGCTTCACTTCTCTCCTTCCTCAACAACACCTCCTCTCCAATCTCCCTAAAA
CTTTCTCACTCCATTCCTCGTTCACATATTCGTGGAAACCATTCCACTCTATCTCTCGCAGTCACCAATGCTTTGAACACCGTACAGTCT
TCCTCTCCGGTGTCCACCTCCGGAGATCGAACAAAGTTGCCATCCTCCAACGCCAAGCCTACGATCCTGGTCTCCGAGAAACTTGGAGAG
GCGGGCCTGGAGGTCCTACGCAAGTTCGGGAACCTGGAGTGCGCGTACAACCTCACGCCGGAGGAGCTCTGCTCCAAGATCTCAGCCTGC
GACGCCCTGATCGTCCGGAGCGGGACGAAGGTCAACAGGCAGGTTTTCGAGGCGTCGAAGGGGAGGCTGAAGGTGGTGGGAAGGGCAGGG
GTTGGAATAGACAATGTGGATCTGCAGGCGGCGACGGAGTTTGGATGCCTCGTCGTTAATGCGCCGACAGCAAACACCGTCGCTGCCGCA
GAGCACGGGATCGCTCTGCTCACTTCCATGGCTAGAAATGTTGCTCAGGCAGATGCCTCCATGAAAGCTGGACTATGGAAACGCAACAAG
TATGTCGGTGTCTCTCTTGTTGGGAAG

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

PF00389    D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

        GO:0008152     GO:0008152

        GO:0016616     GO:0016616

        GO:0051287     GO:0051287

PF02826    D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

        GO:0016616     GO:0016616

        GO:0048037     GO:0048037

GO terms for RU20819 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

  GO:0006564-L-serine biosynthetic process
  GO:0008152-metabolic process
  GO:0055114-oxidation reduction

GO Molecular Function

  GO:0003824-catalytic activity
  GO:0004617-phosphoglycerate dehydrogenase activity
  GO:0005488-binding
  GO:0016491-oxidoreductase activity
  GO:0016597-amino acid binding
  GO:0016616-oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
  GO:0048037-cofactor binding
  GO:0051287-NAD or NADH binding