Rose Transcriptome Database

EST translation and GO annotation for unigene RU21752

ESTScan predicted protein sequence

MAAAAASSTEPTISPSTTRVGWIGTGVMGRSMCGHLLKAGYTLTIFNRTLSKAQPLLDLGAKLADSPRAVASQSDVVFSIVGYPSDVRAG
GGVEEDGADIGX

ESTScan predicted coding region in original sequence Start : 78 End : 381 Strand : plus

AACACATTTCACCTCCACTCCTTCCCCAACTCTCCCATCACTTCCACTCCCACTTCACCGCTCTCCTCCGCCGCACCATGGCCGCCGCCG
CCGCCTCCTCCACCGAGCCCACTATAAGCCCATCAACCACCCGCGTGGGCTGGATCGGCACCGGAGTCATGGGCCGGTCCATGTGCGGCC
ACCTCCTCAAAGCCGGCTACACTCTCACCATCTTCAACCGCACCCTATCCAAGGCCCAGCCGCTTCTCGATTTGGGCGCCAAACTCGCCG
ATTCCCCACGCGCCGTCGCCTCCCAATCCGACGTCGTCTTCTCCATCGTCGGCTACCCCTCCGATGTCCGCGCCGGAGGTGGGGTCGAGG
AGGACGGAGCGGACATCGGAGXX

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

PF01488    Shikimate / quinate 5-dehydrogenase

        GO:0004764     GO:0004764

        GO:0005737     GO:0005737

PF03446    NAD binding domain of 6-phosphogluconate dehydrogenase

        GO:0004616     GO:0004616

        GO:0006098     GO:0006098

GO terms for RU21752 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

  GO:0006098-pentose-phosphate shunt
  GO:0008152-metabolic process
  GO:0055114-oxidation reduction

GO Molecular Function

  GO:0003824-catalytic activity
  GO:0004616-phosphogluconate dehydrogenase (decarboxylating) activity
  GO:0005488-binding
  GO:0008679-2-hydroxy-3-oxopropionate reductase activity
  GO:0016491-oxidoreductase activity
  GO:0050662-coenzyme binding