Rose Transcriptome Database

EST translation and GO annotation for unigene RU22450

ESTScan predicted protein sequence

MEGKSYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSSVLNDEFIAHRLGLIPLTSDRAMSMRFSRDC
DACDGDGQCEYCSVEFHLRARCHSDQTLDVX

ESTScan predicted coding region in original sequence Start : 45 End : 405 Strand : minus

AAACCCCTACCTCTCAGAGAGTCTCAGAGAGAGAGAGAGAGAAGATGGAGGGGAAATCGTACCAGAGGTTCCCGCGGGTGAAAATCCGTG
AAATGAGGCACGACTACCTCAAGTTCGAGCTCCGCGACACCGACGCGAGCGTGGCCAACGCGCTCCGGCGCGTGATGATCGCCGAGGTCC
CCACCGTCGCCATCGACCTCGTCGAGATCGAAATCAACTCCTCCGTCCTCAACGACGAGTTCATCGCCCACCGCCTCGGCCTCATCCCCT
TGACCAGCGACCGCGCCATGAGCATGCGCTTCTCACGTGACTGCGACGCCTGCGACGGCGACGGCCAGTGCGAGTACTGCTCCGTCGAGT
TTCACCTCCGCGCCCGCTGCCACTCCGACCAAACCCTAGATGTCAXX

X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS

InterProtein domain annotations

Pfam domain annotations

PF01000    RNA polymerase Rpb3/RpoA insert domain

        GO:0003899     GO:0003899

        GO:0006350     GO:0006350

        GO:0046983     GO:0046983

PF01193    RNA polymerase Rpb3/Rpb11 dimerisation domain

        GO:0003899     GO:0003899

        GO:0006350     GO:0006350

        GO:0046983     GO:0046983

GO terms for RU22450 (based on the top Swiss-Prot and TrEMBL hits)

GO Biological Process

GO:0006350-transcription

GO Molecular Function

  GO:0003677-DNA binding
  GO:0003899-DNA-directed RNA polymerase activity
  GO:0046983-protein dimerization activity