EST translation and GO annotation for unigene RU24174


ESTScan predicted protein sequence

MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQCLTPNIGVVYSGMGPDFRVLVRKS
RKQAVQYHQLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGFDDSGPQLFQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTD
EIELEDAVHTAILTLKEGFEGQISGKNIEIGIIGEDKIFRVLSPAEIEDYLAEVXVVFLLPDTICNGYRLQDG


ESTScan predicted coding region in original sequence      Start : 59 End : 819 Strand : plus

GCACGAGCTTTACCTCAACCCAAACCCAAAGTTTCAGTCTCTCTCTCTCTAGTGCACCATGGGCGACAGTCAGTACTCGTTTTCGCTCAC
CACTTTCAGTCCTTCCGGGAAGCTTGTGCAGATCGAGCACGCTTTGACAGCAGTCGGGTCGGGTCAGACCTCTTTGGGGATCAAAGCTTC
CAATGGGGTTGTTATCGCCACCGAGAAGAAGCTACCTTCAATCTTGGTTGATGAAGCATCTGTTCAAAAGATACAGTGTTTGACACCAAA
TATTGGAGTTGTTTACAGTGGTATGGGTCCTGATTTTCGAGTTTTGGTTCGGAAAAGCAGGAAGCAGGCAGTGCAGTATCATCAGTTATA
TAAGGAACCAATCCCTGTTACTCAACTTGTGAGGGAAACTGCTGCTGTGATGCAAGAGTTTACTCAATCTGGTGGTGTAAGGCCTTTTGG
AGTATCTCTTCTGGTTGCTGGTTTTGATGACAGTGGTCCCCAACTATTCCAGGTTGATCCTTCAGGTTCTTATTTTTCGTGGAAAGCCTC
TGCAATGGGAAAGAATGTCTCAAATGCAAAAACTTTTCTTGAGAAGAGGTACACTGATGAAATTGAGCTTGAAGATGCTGTGCACACGGC
TATTTTGACTCTGAAGGAGGGATTTGAAGGACAGATCTCAGGGAAGAACATTGAGATTGGAATAATTGGCGAAGACAAAATATTCAGGGT
GCTATCCCCAGCAGAGATTGAAGATTATTTGGCTGAAGTCGAXGTAGTGTTCCTGTTACCAGACACAATCTGCAATGGTTATAGGTTGCA
AGATGGTTGA
TAGTGCGAAAGTGATTTAATGTGTTACAATTATGTCGATCTTTTGGAACCAAATCACAAACCTTTTGGGCTGAAGCAGCA
TTTTGCCATCATTAATAGCCCTGGATTTTTAAGCCTTCAAACTCTTAAAGACTCATTCTGAACAATTTGTACCATGTTTATTAACTCAGC
TGGATGAATTTAAGGTGGAAATTCGTGTGTTGGATTTGCATTTGATGAATGTAGACTTCATTATCATTT


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00227    Proteasome A-type and B-type

        GO:0004298     GO:0004298

        GO:0005839     GO:0005839

        GO:0006511     GO:0006511

PF10584    Proteasome subunit A N-terminal signature

        GO:0004175     GO:0004175

        GO:0005839     GO:0005839

        GO:0006511     GO:0006511

GO terms for RU24174 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
  GO:0006511-ubiquitin-dependent protein catabolic process
  GO:0051603-proteolysis involved in cellular protein catabolic process
GO Molecular Function
  GO:0004175-endopeptidase activity
  GO:0004298-threonine-type endopeptidase activity
  GO:0008233-peptidase activity
  GO:0016787-hydrolase activity
GO Cellular Component
  GO:0005829-cytosol
  GO:0005839-proteasome core complex
  GO:0043234-protein complex