EST translation and GO annotation for unigene RU24443


ESTScan predicted protein sequence

MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLEENQVAENSFIVIMLSKASPSGSSSTQGAPK
SQAQPASTPSTTTTPAAAPAPVPAPAPAPVVAQSQPVVETAAS

ESTScan predicted coding region in original sequence      Start : 158 End : 562 Strand : plus

CAGCAGTGACTTCGTGCTCTCTCCTTTTCTCTCTCTCTCTCTGAAGAGCGTTGCCGGCGGCTACCGGAGATCGGATACTCGCCGGAGACA
GAATCGGAACTGTACGGATTCGGCGAATCGTCGCGACCACAGAGGACGAAGAACCCGGAGAAAGACGATGAAGGTTTTTGTCAAGACTTT
GAAAGGCACCAACTTCGAGATCGAAGTGGAACCCCAGCAGTTGGTTGCGGATGTCAAGCAAATTATAGAGACGGCACAGGGTGCAGATGT
GTACCCTGCCTCAAAACAGATGCTTATTCACCAGGGGAAAGTTCTTAAGGATGCCACGACTCTAGAAGAAAATCAAGTTGCTGAAAACAG
CTTTATTGTGATAATGTTGAGCAAGGCTTCACCTAGTGGAAGCTCCAGTACGCAAGGTGCCCCCAAAAGTCAGGCTCAACCTGCTAGTAC
TCCTAGCACGACGACAACACCAGCGGCAGCTCCGGCTCCAGTTCCGGCTCCTGCACCTGCCCCAGTTGTGGCACAGTCACAACCTGTTGT
TGAAACTGCTGCTAGTTAGTAAGACTACCCCAACTAGAATTACCTTACAAGTAAACT


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00240    Ubiquitin family

        GO:0006464     GO:0006464

GO terms for RU24443 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006289-nucleotide-excision repair
  GO:0043161-proteasomal ubiquitin-dependent protein catabolic process
GO Molecular Function
   GO:0003684-damaged DNA binding
GO Cellular Component
   GO:0005634-nucleus