EST translation and GO annotation for unigene RU25388


ESTScan predicted protein sequence

MSRGSGGGYDRPIPIFSPEGRLFPVEYAFKAVQSAGITSLGVRGKDSVCVVTPKKVPDQLLDPASVTPLFPLTKFLGLLATGMTADARTL
VSQARNEAADFRFKNGYEMPVDVLAYWIANKSQVYTQHAYMRPLGVVAMVLGVDEETGPQLYKCDPAGHYFGHKATSAGLKEQEAINFLE
KKMKNDPSLHTRRLCRLPFLRCNQFCKR

ESTScan predicted coding region in original sequence      Start : 83 End : 706 Strand : plus

GACTATCGTCTGATACCGAAACCCCAAGCCCTAAAGCCGATAGAAAGAAGAAGAAGAAGAAGCGGAAGCTCCGAAATCGAATATGAGTCG
TGGTAGTGGTGGAGGATACGACCGTCCTATCCCGATCTTCTCCCCCGAAGGTCGTCTTTTCCCAGTCGAATATGCGTTTAAGGCTGTCCA
GTCTGCTGGGATTACCTCCCTTGGTGTCCGAGGGAAGGATTCCGTATGTGTTGTGACTCCGAAGAAAGTCCCGGACCAACTTTTGGATCC
GGCGAGTGTAACCCCTCTTTTTCCCCTTACTAAGTTCCTAGGGTTGCTGGCTACTGGCATGACCGCTGATGCAAGGACTCTGGTATCACA
AGCAAGGAATGAAGCAGCTGACTTCCGATTCAAAAATGGATATGAGATGCCTGTAGATGTATTGGCTTACTGGATTGCAAACAAATCACA
AGTCTATACTCAACATGCTTATATGAGACCACTGGGAGTAGTTGCTATGGTGTTGGGTGTTGATGAAGAGACCGGACCTCAACTCTATAA
GTGTGACCCAGCTGGTCATTACTTTGGTCATAAGGCCACAAGTGCTGGATTGAAAGAACAGGAGGCAATTAATTTCTTAGAGAAGAAAAT
GAAGAATGACCCTTCTTTACATACGAGGAGACTGTGCAGACTGCCATTTCTGCGCTGCAATCAGTTCTGCAAGAGG


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00227    Proteasome A-type and B-type

        GO:0004298     GO:0004298

        GO:0005839     GO:0005839

        GO:0006511     GO:0006511

PF10584    Proteasome subunit A N-terminal signature

        GO:0004175     GO:0004175

        GO:0005839     GO:0005839

        GO:0006511     GO:0006511

GO terms for RU25388 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006511-ubiquitin-dependent protein catabolic process
  GO:0051603-proteolysis involved in cellular protein catabolic process
GO Molecular Function
   GO:0004175-endopeptidase activity
  GO:0004298-threonine-type endopeptidase activity
GO Cellular Component
   GO:0005829-cytosol
  GO:0005839-proteasome core complex
  GO:0043234-protein complex