EST translation and GO annotation for unigene RU38171


ESTScan predicted protein sequence

XHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE

ESTScan predicted coding region in original sequence      Start : 1 End : 148 Strand : minus


XXTCACAAGGTCCTCCGGCCATTCCTTCTCCGAAGGTTGAAGTCAGATGTTGAGAAAGGTTTGCCTCCGAAAAAAGAAACAATACTCAAA
GTAGGCATGTCACAAATGCAGAAACAGTACTATAAGGCTTTACTGCAGAAAGATCTTGAA


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00176    SNF2 family N-terminal domain

        GO:0003677     GO:0003677

        GO:0005524     GO:0005524

GO terms for RU38171 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006338-chromatin remodeling
  GO:0043044-ATP-dependent chromatin remodeling
GO Molecular Function
   GO:0003676-nucleic acid binding
  GO:0003677-DNA binding
  GO:0004386-helicase activity
  GO:0005524-ATP binding
  GO:0016818-hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  GO:0031491-nucleosome binding
GO Cellular Component
   GO:0005634-nucleus
  GO:0016585-chromatin remodeling complex