EST translation and GO annotation for unigene RU44650


ESTScan predicted protein sequence

MGSGSIKSNPTRSRKRVEATAEDSAGPSLLRGKDGSAFARCDGCQKNVPVALISFHNCSLDAKIKTNLEAQVVEKPSEVTKKPPTERKKS
SQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTLETE
ADDAEGEAEDVSEKLVPEKEVEEASEKEVEEASDGE

ESTScan predicted coding region in original sequence      Start : 60 End : 710 Strand : plus

GAAGGTATTTACAACTAAGCATTGATTCATAGTGATAGAAGAAAAGGAAGAGTGAAGAAATGGGAAGCGGGTCAATCAAATCGAACCCAA
CAAGGTCGAGGAAGAGGGTGGAGGCCACGGCGGAGGACTCGGCTGGGCCTTCTCTCCTTCGCGGCAAAGATGGCAGTGCTTTTGCCAGAT
GCGATGGGTGCCAAAAGAATGTCCCGGTGGCGCTCATAAGCTTTCACAATTGTAGCCTTGATGCCAAAATCAAGACCAACCTGGAGGCTC
AAGTCGTGGAAAAGCCCAGTGAAGTGACTAAGAAGCCTCCCACAGAGAGGAAGAAATCGTCACAACCAAATGCCAAGAGAGCCAAAACTG
ACAAAGTGAACAAGAGCAAGGATCCAAATGCACCCAAGCGCCCCCTCACTGCCTTCTTCCTTTTCATGAATGATTTTAGGAAAGCCTACA
AGGAAGCTAATCCTGATTCCAAGGGTGTTAAGATGGTTGCAAAGGAGGGTGGTGAAAAGTGGAATCTTATGACTGATGAGGAGAAGAAGC
CTTATATGGACAAAGCTGCTGAGCTTAAAGATGAGTACAAAAAGACCTTAGAGACTGAAGCTGATGATGCTGAAGGTGAGGCTGAAGATG
TTTCAGAAAAGCTAGTGCCAGAGAAGGAAGTAGAGGAAGCTTCAGAAAAGGAAGTGGAGGAAGCATCAGATGGGGAGTAGTATATTTTGT
CTTCTTAAGTCTAATGTCTTCTGTATTTGAAATGAGTAAAATG


X -- added by ESTScan; agctn -- deleted by ESTScan; AGCTN -- CDS



InterProtein domain annotations

Pfam domain annotations

PF00505    HMG (high mobility group) box

        GO:0003677     GO:0003677

        GO:0005634     GO:0005634

GO terms for RU44650 (based on the top Swiss-Prot and TrEMBL hits)


GO Biological Process
   GO:0006333-chromatin assembly or disassembly
GO Molecular Function
   GO:0003677-DNA binding
  GO:0003682-chromatin binding
  GO:0030527-structural constituent of chromatin
GO Cellular Component
   GO:0000785-chromatin
  GO:0005634-nucleus