SNPs of unigene RU01258
               1      -     51
RU01258        --> ATCCCTCTCTCTCCTTTTCTCGGCGAATAGATTTGTTGCGTTTCTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- ..................................................
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> ATCCCTCTCTCTCCTTTTCTCGGCGAATAGATTTGTTGCGTTTCTTTTTT
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               51     -    101
RU01258        --> TATTGGTTTTACCCGGCTGAGTAGCATAAAAGGAAATGGCTCGGCTAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- ..................................................
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> TATTGGTTTTACCCGGCTGAGTAGCATAAAAGGAAATGGCTCGGCTAAAT
ET0029870      --> ..............................................AAAT
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               101    -    151
RU01258        --> GTGATAGCCGAGCCAGAAAAGAAATAGATTAGAAGAGAGAAATGGGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ...................................AGAGAAATGGGTTGA
CT0007201      <-- .......................................AAATGGGTTGA
ET0088972      <-- ..................................................
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> GTGATAGCCGAGCCAGAAAAGAAATAGATTAGAAGAGAGAAATGGGTTGA
ET0029870      --> GTGATAGCCGAGCCAGAAAAGAAATAGATTAGAAGAGAGAAATGGGTTGA
CT0066375      --> ................AAAAGAAATAGATTAGAAGAGAGAAATGGGTTGA
ET0036793      --> ........................................AATGGGTTGA
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               151    -    201
RU01258        --> AAAGAAAGGAAGAAGGAATCCTTTTTAAATAGGACTTGATCCACCGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- AAAGAAAGGAAGAAGGAATCCTTTTTAAATAGGACTTGATCCACCGTACA
CT0007201      <-- AAAGAAAGGAAGAAGGAATCCTTTTTAAATAGGACTTGATCCACCGTACA
ET0088972      <-- ..................................................
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> AAAGAAAGGAAGAAGGAATCCTTT..........................
ET0029870      --> AAAGAAAGGAAGAAGGAATCCTTTTTAAATAGGACTTGATCCACCGTACA
CT0066375      --> AAAGAAAGGAAGAAGGAATCCTTTTTAAATAGGACTTGATCCACCGTACA
ET0036793      --> AAAGAAAGGAAGAAGGAATCCTTTTTAAATAGGACTTGATCCACCGTACA
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               201    -    251
RU01258        --> TATTAGGTTTGGTGGAATCAAATTGATTCCTACTTCAAGCATTGGATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- TATTAGGTTTGGTGGAATCAAATTGATTCCTACTTCAAGCATTGGATCTC
CT0007201      <-- TATTAGGTTTGGTGGAATCAAATTGATTCCTACTTCAAGCATTGGATCTC
ET0088972      <-- ..................................................
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> ..................................................
ET0029870      --> TATTAGGTTTGGTGGAATCAAATTGATTCCTACTTCAAGCATTGGATCTC
CT0066375      --> TATTAGGTTTGGTGGAATCAAATTGATTCCTACTTCAAGCATTGGATCTC
ET0036793      --> TATTAGGTTTGGTGGAATCAAATTGATTCCTACTTCAAGCATTGGATCTC
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               251    -    301
RU01258        --> TATCTCAGTTAAGAGGAGTCATGGAAAGAACAGGTTCAAAATCACGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- TATCTCAGTTAAGAGGAGTCATGGAAAGAACAGGTTCAAAATCA......
CT0007201      <-- TATCTCAGTTAAG.....................................
ET0088972      <-- ..................................................
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> ..................................................
ET0029870      --> TATCTCAGTTAAGAGGAGTCATGGAAAGAACAGGTTCAAAATCACGATCA
CT0066375      --> TATCTCAGTTAAGAGGAGTCATGGAAAGAACAGGTTCAAAATCACGATCA
ET0036793      --> TATCTCAGTTAAGAGGAGTCATGGAAAGAACAGGTTCAAAATCACGATCA
CT0034388      --> .........................................ctgcgtacc
CT0059908      --> .........................................ctgcgtacc
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               301    -    351
RU01258        --> ATTTCCTTTTT-CAAATCCGGCAGCAGCTGCACGAGCCCTTCCTGCATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- ..................................................
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> ..................................................
ET0029870      --> ATTTCCTTTTTACAAATCCGGCAGCAGCTGCACGA...............
CT0066375      --> ATT-CCTTTTT-CAAATCCGGCAGCAGCTGCACGAGCCCTTCCTGCAT..
ET0036793      --> ATTTCCTTTTT-CAAATCCGGCAGCAGCTGCACGAGCCCTTCCTGCATGC
CT0034388      --> aaTTCCTTTTT-CAAATCCGGCAGCAGCTGCACGAGCCCTTCCTGCATGC
CT0059908      --> aaTTCCTTTTT-CAAATCCGGCAGCAGCTGCACGAGCCCTTCCTGCATGC
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               351    -    401
RU01258        --> CATAAATGACCTACGAATAGGAAGAATCCTAGAACAAAATGAGAAGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- ............................................AGTAGA
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> ..................................................
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> CATAAATGACCTA-GAATAGGA............................
CT0034388      --> CATAAATGACCTACGAATAGGAAGAATCCTAGAACAAAATGAGAAGTAGA
CT0059908      --> CATAAATGACCTACGAATAGGAAGAATCCTAGAACAAAATGAGAAGTAGA
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               401    -    451
RU01258        --> TAACCAACTTCTAGGAGAGACATAATTGACTGCATTGATCTCGGTAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- TAACCAACTTCTAGGAGAGACATAATTGACTGCATTGATCTCGGTAGCTA
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> ..................................................
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> TAACCAACTTCTAGGAGAGACATAATTGACTGCATTGATCTCGGTAGCTA
CT0059908      --> TAACCAACTTCTAGGAGAGACATAATTGACTGCATTGATCTCGGTAGCTA
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               451    -    501
RU01258        --> CGCCACCCACGGAATTTAAAG-AACCT-AAAGG-AG-CATGAGTCATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- CGCCACCCACGGAATTTAAAG-AACCT-AAAGG-AG-CATGAGTCATATA
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> ..................................................
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> CGCCACCCACGGAATTTAAAG-AACCT-AAAGG-AG-CATGAGTCATATA
CT0059908      --> CGCCACCCACGGAATTT.................................
ET0026262      --> ...............TTAAAGTAACCTTAAAGGTAG-CATGAGTCATATA
ET0038277      --> ...............TTAAAGTAACCTTAAAGGTAGTCATGAGTCATATA
ET0040026      --> ...............TTAAAGTAACCTTAAAGGTAG-CATGAGTCATATA
ET0040824      --> ...............TTAAAGTAACCTTAAAGGTAG-CATGAGTCATATA
ET0042080      --> ...............TTAAAGTAACCTTAAAGGTAG-CATGAGTCATATA
ET0044202      --> ...............TTAAAGTAACCT-AAAGGTAG-CATGAGTCATATA
ET0046189      --> .............ttaaaagtaacctT-AAAGGTAG-CATGAGTCATATA
ET0047179      --> .............ttaaaagtaaccttaAAAGGTAG-CATGAGTCATATA
ET0035594      --> ..............ttaaagtaaccttaaaaggtagtCATGAGTCATATA
ET0047581      --> ..............ttaaagtaaccttaaaggtagtctATGAGTCATATA

               501    -    551
RU01258        --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
CT0042098      <-- ..................................................
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> ..................................................
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTA..................
CT0059908      --> ..................................................
ET0026262      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
ET0038277      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
ET0040026      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
ET0040824      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
ET0042080      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGTTCTTTTTTCAGCCTA
ET0044202      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
ET0046189      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
ET0047179      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
ET0035594      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA
ET0047581      --> TTCCGCAGAACGCCGCTCTTGCCAAGGCTGTATGT-CTTTTTTCAGCCTA

               551    -    601
RU01258        --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- CTCAAGTCCAAACCATTAGGACCCCTTAG.....................
CT0042098      <-- ...............TTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC
ET0022525      <-- ..................................................
CT0045951      <-- ..................................................
ET0017389      --> ..................................................
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC
ET0038277      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC
ET0040026      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC
ET0040824      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC
ET0042080      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACCGAGGGGGCAC
ET0044202      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC
ET0046189      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC
ET0047179      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACCGAGGGGGCAC
ET0035594      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC
ET0047581      --> CTCAAGTCCAAACCATTAGGACCCCTTAGAGGTTCTAACC-AGGGGGCAC

               601    -    651
RU01258        --> GCAGATCCCAGAAACGCATAGTTTCTCCT-CCAAAAATAACTTCCCCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- ..................................................
CT0042098      <-- GCAGATCCCAGAAACGCATAGTTTCTCCT-CCAAAAATAACTTCCCCAGT
ET0022525      <-- .......CCAGAAACGCATAGTTTCTCCT-CCAAAAATAACTTCCCCAGT
CT0045951      <-- ..................................................
ET0017389      --> ..................................................
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> GCAGATCCCAGAAACGCATAGTTTCTCCT-CCAAAAATAACTTCCCCAGT
ET0038277      --> GCAGATCCCAGAAACGCATAGTTTCTCCT.....................
ET0040026      --> GCAGATCCCAGAAACGCATAGTTTCTCCT-CCAAAAATAACTTCCCCAGT
ET0040824      --> GCAGATCCCAGAAACGCATAGTTTCTCCT-CCAAAAATAACTTCCCCAGT
ET0042080      --> GCAGATCCCAGAAACGCATAGTTT..........................
ET0044202      --> GCAGATCCCAGAAACGCATAGTTTCTCCT-CCAAAAATAACTTCCCCAGT
ET0046189      --> GCAGATCCCAGAAACGCATAGTTTCTCCT-CCAAAAATAACTTCCCCAGT
ET0047179      --> GCAGATCCCAGAAACGCATAGTTTCTCCTACCAAA...............
ET0035594      --> GCAGATCCCAGAAACGCATAGTTTCTCCT-CCAAAAATAACTTCCCCAGT
ET0047581      --> GCAGATCCCAGAAACGCATAGTTTCTCCT.....................

               651    -    701
RU01258        --> TGGAGAGCGCATTAGATATTTACCTAAACCGGTAGGTCCTTGAGCAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- ..................................................
CT0042098      <-- TGGAGAGCGCATTAGATATTTACCTAAACCGGTAGGTCCTTGAGCAGATC
ET0022525      <-- TGGAGAGCGCATTAGATATTTACCTAAACCGGTAGGTCCTTGAG......
CT0045951      <-- .........CATTAGATATTTACCTAAACCGGTAGGTCCTTGAGCAGATC
ET0017389      --> ..................................................
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> TGGAGAGCGCATTAGATATTTACCTAAACCGGTAGGTCCTTGAGCAGATC
ET0038277      --> ..................................................
ET0040026      --> TGGAGAGCGCATTAGATATTTACCTAAACCGGTAGGTCCTTGAGCAGATC
ET0040824      --> TGGAGAGCGCATTAGATATTTACCTAAACCGGTAGGTCCTTGAGCAGATC
ET0042080      --> ..................................................
ET0044202      --> TGGAGAGCGCATTAGATATTTACCTAAACCGGTAGGTCCTTGAGCAGATC
ET0046189      --> TGGAGAGCGCATTAGATATTTACCTAAACCGGTAGGTCCTTGAGCAGATC
ET0047179      --> ..................................................
ET0035594      --> TGGAGAGCGCATTAGATATTTACCTAAACCGGTAGGTCCTTGAGCAGATC
ET0047581      --> ..................................................

               701    -    751
RU01258        --> CTACGTTAGCCCCAAGACGTTGGTCTCTAA-CCAAAAAAGTAAATGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................  Control
CT0007201      <-- ..................................................  Control
ET0088972      <-- ..................................................  Ethylene
CT0042098      <-- CTACGTTAGCCCCAAGACGTTGGTCTCTAA-CCAAAAAAGTAAATGCTTG  Control
ET0022525      <-- ..................................................  Ethylene
CT0045951      <-- CTACGTTAGCCCCAAGACGTTGGTCTCTAA-CCAAAAAAGTAAATGCTTG  Control
ET0017389      --> ..................................................  Ethylene
ET0029870      --> ..................................................  Ethylene
CT0066375      --> ..................................................  Control
ET0036793      --> ..................................................  Ethylene
CT0034388      --> ..................................................  Control
CT0059908      --> ..................................................  Control
ET0026262      --> CTACGTTAGCCCCAAGACGTTGGTCTCTAAACCAAAAAAGTAAtg.....  Ethylene
ET0038277      --> ..................................................  Ethylene
ET0040026      --> CTACGTTAGCCCCAAGACGTTGGTCTCTAAACCAAAAAAGTAAtg.....  Ethylene
ET0040824      --> CTACGTTAGCCCCAAGACGTTGGTCTCTAAACCAAAAAAGTAA.......  Ethylene
ET0042080      --> ..................................................  Ethylene
ET0044202      --> CTACGTTAGCCCCAAGACGTTGGTCTCTAAACCAAAAAAGTAAtgt....  Ethylene
ET0046189      --> CTACGTTAGCCCCAAGACGTTGGTCTCTAAACCAAAAAA...........  Ethylene
ET0047179      --> ..................................................  Ethylene
ET0035594      --> CTACGTTAGCCCCAAGACGTTGGTCTCTAAACCAAAAAAGTAAt......  Ethylene
ET0047581      --> ..................................................  Ethylene

               751    -    801
RU01258        --> AGCTTGAGAAGCTTCGGGTCCAGTGGGCCCGTAAAACTCACTGGGATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- ..................................................
CT0042098      <-- AGCTTGAGAAGCTTCGGGTCCAGTGGGCCCGTAAAACTCACTGGGATAGG
ET0022525      <-- ..................................................
CT0045951      <-- AGCTTGAGAAGCTTCGGGTCCAGTGGGCCCGTAAAACTCACTGGGATAGG
ET0017389      --> ..................................................
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               801    -    851
RU01258        --> CGGTATTATTGAACCAAACAAAGCAACAAGCAATAAAACCAAAAACAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0004067      <-- ..................................................
CT0007201      <-- ..................................................
ET0088972      <-- ..................................................
CT0042098      <-- CGGT..............................................
ET0022525      <-- ..................................................
CT0045951      <-- CGGTATTATTGAACCAAACAAAGCAACAAGCAATAAAACCAAAAACAGAT
ET0017389      --> ..................................................
ET0029870      --> ..................................................
CT0066375      --> ..................................................
ET0036793      --> ..................................................
CT0034388      --> ..................................................
CT0059908      --> ..................................................
ET0026262      --> ..................................................
ET0038277      --> ..................................................
ET0040026      --> ..................................................
ET0040824      --> ..................................................
ET0042080      --> ..................................................
ET0044202      --> ..................................................
ET0046189      --> ..................................................
ET0047179      --> ..................................................
ET0035594      --> ..................................................
ET0047581      --> ..................................................

               851    -    901
RU01258        --> AAAGCG
                   ~~~~~~
CT0004067      <-- ......
CT0007201      <-- ......
ET0088972      <-- ......
CT0042098      <-- ......
ET0022525      <-- ......
CT0045951      <-- AAAGCG
ET0017389      --> ......
ET0029870      --> ......
CT0066375      --> ......
ET0036793      --> ......
CT0034388      --> ......
CT0059908      --> ......
ET0026262      --> ......
ET0038277      --> ......
ET0040026      --> ......
ET0040824      --> ......
ET0042080      --> ......
ET0044202      --> ......
ET0046189      --> ......
ET0047179      --> ......
ET0035594      --> ......
ET0047581      --> ......