1 - 51
RU01635 --> GTTAGTAAAAAAAAATTGTAGGTTTTATTTCTAATTAACTTAAAATTAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> GTTAGTAAAAAAAAATTGTAGGTTTTATTTCTAATTAACTTAAAATTAAG
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
51 - 101
RU01635 --> CTAGTATTTTAGTTCCTTTTGTTTTTTTTTTGTTTCATAGAGTT-CC-AA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ...........................................T-CC-AA
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> CTAGTATTTTAGTTCCTTTTGTTTTTTTTTTGTTTCATAGAGTT-CC-AA
CT0077983 --> ......................TTTTTTTTTGTT-CATAGAGTT-CC-AA
CT0062353 --> ...................................CATAGAGTT-CC-AA
CT0079908 --> ...................................CATAGAGTT-CC-AA
CT0083888 --> ...................................CATAGAGTT-CC-AA
ET0057202 --> ...................................CATAGAGTT-CC-AA
ET0067795 --> .............................agttacaATAGAGTTACCAAA
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
101 - 151
RU01635 --> -CGAAAACGGGGGTAATGTCAAATTTTTATGTCTATAGACCCCATTACTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- -CGAAAACGGGGGTAATGTCAAATTTTTATGTCTATAGACCCCATTACTT
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> -CGAAAACGGGGGTAATGTCAAATTTTTATGTCTATAGACCCCATTACTT
CT0077983 --> -CGAAAACGGGGGTAATGTCAAATTTTTATGTCTATAGACCCCATTACTT
CT0062353 --> -CGAAAACGGGGGTAATGTCAAATTTTTATGTCTATAGACCCCATTACTT
CT0079908 --> -CGAAAACGGGGGTAATGTCAAATTTTTATGTCTATAGACCCCATTACTT
CT0083888 --> -CGAAAACGGGGGTAATGTCAAATTTTTATGTCTATAGACCCCATTACTT
ET0057202 --> ACGAAAACGGGGGTAATGTCAAATTTTTATGTCTATAGACCCCATTACTT
ET0067795 --> -CGAAAACGGGGGTAATGTCAAATTTTTATGTCTATAGACCCCATTACTT
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
151 - 201
RU01635 --> CTACGTCATTTCTTATTTATTCACTTGATCTTTTTTTCTATATTTATTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- CTACGTCATTTCTTATTTATTCACTTGATCTTTTTT-CTATATTTATTTT
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> CTACGTCATTTCTTATTTATTCACTTGATCTTTTTTTCTATATTTATTTT
CT0077983 --> CTACGTCATTTCTTATTTATTCACTTGATCTTTTTT-CTATATTTATTTT
CT0062353 --> CTACGTCATTTCTTATTTATTCACTTGATCTTTTTTTCTATATTTATTTT
CT0079908 --> CTACGTCATTTCTTATTTATTCACTTGATCTTTTTT-CTATATTTATTTT
CT0083888 --> CTACGTCATTTCTTATTTATTCACTTGATCTTTTTTTCTATATTTATTTT
ET0057202 --> CTACGTCATTTCTTATTTATTCACTTGATCTTTTTTTCTATATTTATTTT
ET0067795 --> CTACGTCATTTCTTATTTATTCACTTGATCTTTTTTTCTATATTTATTTT
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
201 - 251
RU01635 --> ATTAATTGAATTTTGTTT-GTTGATTAAGGCGAAGTTCCGTAAAAACCCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ATTAATTGAATTTTGTTT-GTTG...........................
CT0071115 <-- .............TGTTT-GTTGATTAAGGCGAAGTTCCGTAAAAACCCC
CT0024637 <-- ......................tATTAAGGCGAAGTTCCGTAAAAACCCC
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ATTAATTGAATTTTGTTTTGTTGATTAAGGCGAAGTTCCGTAAAAACCCC
CT0077983 --> ATTAATTGAATTTTGTTT-GTTGATTAAGGCG..................
CT0062353 --> ATTAATTGAATTTTGTTT-GTTGATTAAGGCGAAGTTCCGTAAAAACCCC
CT0079908 --> ATTAATTGAATTTTGTTT-GTTGATTAAGGCGAAGTTCCGTAAAAACCCC
CT0083888 --> ATTAATTGAATTTTGTTT-GTTGATTAAGGCGAAGTTCCGTAAAAACCCC
ET0057202 --> ATTAATTGAATTTTGTTT-GTTGATTAAGGCGAAGTTCCGTAAAAACCCC
ET0067795 --> ATTAATTGAATTTTGTTT-GTTGATTAAGGCGAAGTTCCGTAAAAACCCC
ET0040946 --> ...AATTGAATTTTGTTT-GTTGATTAAGGCGAAGTTCCGTAAAAACCCC
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
251 - 301
RU01635 --> CGCCTTTTTTAAAATATCATGAACAGTTCCTGTAGGTTGAGCGCCTTTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- -GCCTTTTTTAAAATATCATGAACAGTTCCTGTAGGTTGAGCGCCTTTTT
CT0024637 <-- CGCCTTTTTTGAAATATCATGAACAGTTCCTGTAGGTTGAGCGCCTTTTT
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> CGCCTTTTTTGAAATATCATGAACAGTTCCTGTAGGTTGAGCGCCTTTTT
CT0077983 --> ..................................................
CT0062353 --> CGCCTTTTTTAAAATATCATGAACAGTTCCTGTAGGTTGAG.........
CT0079908 --> CGCCTTTTT.........................................
CT0083888 --> CGCCTTTTTTAAA.....................................
ET0057202 --> CGCCTTTTTTAAAATATCATGAACAGTTCCTGTAGGTTGAGCGCCTTTTT
ET0067795 --> CGCCTTTTTTAAAATATCATGAACAGTTCCTGTAGGTTGAGCGCCTTTTT
ET0040946 --> CGCCTTTTTTGAAATATCATGAACAGTTCCTGTAGGTTGAGCGCCTTTTT
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
301 - 351
RU01635 --> CAAGGAAGTATAGAATAGCAGGAACATTTAAATAGATTTGATTCTTTATC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- CAAGGAAGTATAGAATAGCAGGAACATTTAAATAGATTTGATTCTTTATC
CT0024637 <-- CAAGGAAGTATAGAATAGCAGGAACATTTAAATAGATTTGATTCTTTATC
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> CAAGGAAGTATAGAATAGCAGGAACATTTAAA..................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> CAAAGAAGTATAGAATAGCAGGAACATTTAAATAGATTTGATTCTTTATC
ET0067795 --> CAAAGAAGTATAGAATAGCAGGAACATTTAAATAGATTTGATTCTTTATC
ET0040946 --> CAAGGAAGTATAGAATAGCAGGAACATTTAAATAGATTTGATTCTTTATC
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
351 - 401
RU01635 --> GGATCATAAAAACCC-ACTTTACGAAGATCTCTTCCCTCTCGTCGGGATC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- GGATCATAAAAACCC-ACTTTACGAAGATCTCTTCCCTCTCGTCGGGATC
CT0024637 <-- GGATCATAAAAACCC-ACTTTACGAAGATCTCTTCCCTCTCGTCGGGATC
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> GGATCATAAAAACCCCACTTTACGAAGAT.....................
ET0067795 --> GGATCATAAAAACCC-ACTTTACGAAGATCT...................
ET0040946 --> GGATCATAAAAACCC-ACTTTACGAAGATCTCTTCCCTCTCGTCGGGATC
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
401 - 451
RU01635 --> GAACATCAATTGCAACGATTCGATAAATGGCTCATTGGGATAGATGAAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- GAACATCAATTGCAACGATTCGATAAATGGCTCATTGGGATAGATGAAGA
CT0024637 <-- GAACATCAATTGCAACGATTCGATAAATGGCTCATTGGGATAGATGAAGA
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> GAACATCAATTGCAACGATTCGATAAATGGCTCATTGGGATAGATGAAGA
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
451 - 501
RU01635 --> ATACCCCCCCTAGAAACGTATAAGAAGTTTTCCCTTCGTACGGCTCGAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ATACCCCCCC........................................
CT0024637 <-- ATACCCCCCCTAGAAACGTATAAGAAGTTTTCCCCTCGTACGGCTCGAGA
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ATACCCCCCCTAGAAACG................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
501 - 551
RU01635 --> AAATtcgaaattatgtctatgtatagaattacaatatcaaatatatatcc
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- AAAT..............................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
551 - 601
RU01635 --> ataaaataaaatcatcaaattaattagactattgattttagtactttttt
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
601 - 651
RU01635 --> cttattcttaccccaccaaaaaagaaaattagtcgtatttgcaccctcat
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
651 - 701
RU01635 --> aactcaagttggataactctgaaataactcaaaagagaaaccTTTTAGAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ......................aatatctaaaaggtttctctTTTGAGTT
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
701 - 751
RU01635 --> ATTTCATCTATCGAGCGGTCTCTAACCCTTTAATTGTCTGTCTTCTTTAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ATTTCATCTATTGAGCGGTCTCTAACCCTTTAATTGTCTGTCTTCTTTAG
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
751 - 801
RU01635 --> AATCCATTTTGATTCTTTTCTGATCTAGTTGTTAAGACAATTGAAAATGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> AATCCATTTTGATTCTTTTCTGATCTAGTTGTTAAGACAATTGAAAATGG
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
801 - 851
RU01635 --> TATTTCCTTGTTCCAGGATCTTTGccttgaatcattaggtttagacatta
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> TATTTCCTTGTTCCAGGATCTTTG..........................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
851 - 901
RU01635 --> cttcggtgatctttaaatcctttcaaaacggcagcaacataccatttttt
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
901 - 951
RU01635 --> gtgatttctttCTGTCAAAGAATCATACGAATGTTTGATTCCTGCGTAAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ...........CTGTCAAAGAATCATACGAATGTTTGATTCCTGCGTAAT
CT0086087 --> ..................................................
ET0063142 --> ..................................................
ET0094888 --> ..................................................
951 - 1001
RU01635 --> ACACTTTCCTTTTGATTTGATCGAAAGAGTTTTACCAATTTCAACAAACT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ....aTTCCTTTTGATTTGATCGAAAGAGTTTTACCAATTTCAACAAACT
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ACACTTTCCTTTTGATTTGATCGAAAGAGTTTTACCAATTTCAACAAACT
CT0086087 --> .............GATTTGATCGAAAGAGTTTTACCAATTTCAACAAACT
ET0063142 --> .............GATTTGATCGAAAGAGTTTTACCAATTTCAACAAACT
ET0094888 --> ..................GATCGAAAGAGTTTTACCAATTTCAACAAACT
1001 - 1051
RU01635 --> TT-CATTTTGAATTGGAAAGTTTCTCGAATAGGACCCTTTAAGTTTATGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- .................................................. Control
CT0071115 <-- .................................................. Control
CT0024637 <-- .................................................. Control
CT0094152 <-- TT-CCTTTTGAATTGGAAAGTTTCTCGAATAGGACCCTTTAAGTTTATGT Control
CT0016903 <-- .................................................. Control
ET0105831 --> .................................................. Ethylene
CT0077983 --> .................................................. Control
CT0062353 --> .................................................. Control
CT0079908 --> .................................................. Control
CT0083888 --> .................................................. Control
ET0057202 --> .................................................. Ethylene
ET0067795 --> .................................................. Ethylene
ET0040946 --> .................................................. Ethylene
CT0109392 --> .................................................. Control
CT0092289 --> TTTCCTTTTGAATTGGAAAGTTTCTCGAATAGGACCCTTTAAGTTTATGT Control
CT0086087 --> TT-CCTTTTGAATTGGAAAGTTTCTCGAATAGGACCCTTTAAGTTTATGT Control
ET0063142 --> TT-CATTTTGAATTGGAAAGTTTCTCGAATAGGACCCTTTAAGTTTATGT Ethylene
ET0094888 --> TT-CATTTTGAATTGGAAAGTTTCTCGAATAGGACCCTTTAAGTTTATGT Ethylene
1051 - 1101
RU01635 --> ATCGAAAATATACTTACGAAGCTGTTCCAATTTATTGATTGATACTAACC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ATCGAAAATATACTTACGAAGCTGTTCCAATTTATTGATTGATACTAACC
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ATCGAAAATATACTTACGAAGCTGTTCCAATTT.................
CT0086087 --> ATCGAAAATATACTTACGAAGCTGTTCCAATTTATTGATTGATACTAACC
ET0063142 --> ATCGAAAATATACTTACGAAGCTGTTCCAATTTATTGATTGATACTAACC
ET0094888 --> ATCGAAAATATACTTACGAAGCTGTTCCAATTTATTGATTGATACTAACC
1101 - 1151
RU01635 --> CTAGATTCTTGCCCCTGAAAAATAAATCAATACTTTCTACTCGAGCTCCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- CTAGAT............................................
CT0016903 <-- ..................................................
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> CTAGATTCTTGCCCCTGAAA..............................
ET0063142 --> CTAGATTCTTGCCCCTGAAAAATAAATCAATACTTTCTACTCGAGCTCCA
ET0094888 --> CTAGATTCTTGCCCCTGAAAAATAAATCAATACTTTCTACTCGAGCTCCA
1151 - 1201
RU01635 --> TCCTATACTATATTATATTATATTATATCATACCCCCCCAAAAAAGAGAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- ...TATACTATATTATATTATATTATATCATACCCCCCCAAAAAAGAGAG
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> TCCTATACTATATTATATTATATTATATCATACCCCCCCAAAAAAGAGAG
ET0094888 --> TCCTATACTATATTATATTATATTATATCATACCCCCCCAAAAAAGAGAG
1201 - 1251
RU01635 --> TTACAGCGGAACAGAACAAATGATGTCGAGCCAAGAGCACTTTCATTCCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ..................................................
CT0071115 <-- ..................................................
CT0024637 <-- ..................................................
CT0094152 <-- ..................................................
CT0016903 <-- TTACAGCGGAACAGAACAAATGATGTCGAGCCAAGAGCACTTTCATTCCT
ET0105831 --> ..................................................
CT0077983 --> ..................................................
CT0062353 --> ..................................................
CT0079908 --> ..................................................
CT0083888 --> ..................................................
ET0057202 --> ..................................................
ET0067795 --> ..................................................
ET0040946 --> ..................................................
CT0109392 --> ..................................................
CT0092289 --> ..................................................
CT0086087 --> ..................................................
ET0063142 --> TTACAGCGGAACAGAACAAATGATGTCGAGCCAAG...............
ET0094888 --> TTACAGCGGAACAGAACAAATGATGTCGAGCCAA................
1251 - 1301
RU01635 --> ATATAATATATAAAAAAATGGTGGATGTAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0013061 <-- ...............................
CT0071115 <-- ...............................
CT0024637 <-- ...............................
CT0094152 <-- ...............................
CT0016903 <-- ATATAATATATAAAAAAATGGTGGATGTAAG
ET0105831 --> ...............................
CT0077983 --> ...............................
CT0062353 --> ...............................
CT0079908 --> ...............................
CT0083888 --> ...............................
ET0057202 --> ...............................
ET0067795 --> ...............................
ET0040946 --> ...............................
CT0109392 --> ...............................
CT0092289 --> ...............................
CT0086087 --> ...............................
ET0063142 --> ...............................
ET0094888 --> ...............................
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