1 - 51
RU01636 --> TTCATCATCCAACTCTTGGCGATTTTGAACTACAACATTTACCTGTGGGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> TTCATCATCCAACTCTTGGCGATTTTGAACTACAACATTTACCTGTGGGT
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
51 - 101
RU01636 --> GTGAATGATGCTGAACTTGAAGAGCGTATAA-TTCAGCACTTAGCTGCTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> GTGAATGATGCTGAACTTGAAGAGCGTATAA-TTCAGCACTTAGCTGCTG
ET0118701 --> ..............ACTTGAAGAGCGTATAA-TTCAGCACTTAGCTGCTG
ET0126565 --> ......................AGCGTATAAATTCAGCACTTAGCTGCTG
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
101 - 151
RU01636 --> CTGCTGCAATGGG-TCGGGCACGCCATATTGCCAGAAGGGAGGGCCAGAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> CTGCTGCAATGGG-TCGGGCACGCCATATTGCCAGAAGGGAGGGCCAGAG
ET0118701 --> CTGCTGCAATGGG-TCGGGCACGCCATATTGCCAGAAGGGAGGGCCAGAG
ET0126565 --> CTGCTGCAATGGGGTCGGGCACGCCATATTGCCAGAAGGGAGGGCCAGAG
ET0091633 --> ............G-TCGGGCACGCCATATTGCCAGAAGGGAGGGCCAGAG
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
151 - 201
RU01636 --> AAATAGGTCATCAGGTCAAGGTCGGCCACAATTCCTGGTCTTCTCTACTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> AAATAGGTCATCAGGTCAAGGTCG..........................
ET0118701 --> AAATAGGTCATCAGGTCAAGGTCGGCCACAATTCCTGGTCTTCTCTACTC
ET0126565 --> AAATAGGTCATCAGGTCAAGGTCGGCCACAATTCCTGGTCTTCTCTACTC
ET0091633 --> AAATAGGTCATCAGGTCAAGGTCGGCCACAATTCCTGGTCTTCTCTACTC
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
201 - 251
RU01636 --> ATCCTAATGCACCTCCTACCACAGCTT-CTTCC-TCCCCAGATCAGATGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ................................................GG
CT0042480 <-- .................................................G
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ATCCTAATGCACCTCCTACCACAGCTT-CTTCC-TCCCCAGATCAGATGG
ET0126565 --> ATCCTAATGCACCTCCTACCACAGCTTTCTTCCCTCCCCAGATCAGATGG
ET0091633 --> ATCCTAATGCACCTCCTACCACAGCTT-CTTCC-TCCCCAGATCAGATGG
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
251 - 301
RU01636 --> G-AGCGGGTGAACAAGCTTCTTCCGTT-GCAGTAACTTTTCCGT-CACCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- G-AGCGGGTGAACAAGCTTCTTCCGTTTGCAGTAACTTTTCCGTTCACCT Control
CT0042480 <-- G-AGCGGGTGAACAAGCTTCTTCCGTTTGCAGTAACTTTTCCGT-CACCT Control
CT0110943 <-- .................................................. Control
CT0113024 <-- .................................................. Control
ET0144289 <-- .................................................. Ethylene
ET0146407 <-- .................................................. Ethylene
ET0055265 <-- .................................................. Ethylene
ET0080723 <-- .................................................. Ethylene
ET0081518 <-- .................................................. Ethylene
ET0080214 <-- .................................................. Ethylene
CT0008028 <-- .................................................. Control
CT0015868 <-- .................................................. Control
CT0056707 --> .................................................. Control
ET0118701 --> G-AGCGGGTGAACAAGCTTCTTCCGTT-GCAGTAACTTTTCCGT-CACCT Ethylene
ET0126565 --> GGAGCGGGTGAACAAGCTTCTTCCGTT-GCAGTA................ Ethylene
ET0091633 --> G-AGCGGGTGAACAAGCTTCTTCCGTT-GCAGTAACTTTTCCGT-CACCT Ethylene
CT0023426 --> .................................................. Control
CT0064276 --> .................................................. Control
CT0009561 --> .................................................. Control
CT0087632 --> .................................................. Control
ET0088934 --> .................................................. Ethylene
ET0082304 --> .................................................. Ethylene
ET0085923 --> .................................................. Ethylene
ET0000059 --> .................................................. Ethylene
ET0000802 --> .................................................. Ethylene
ET0002787 --> .................................................. Ethylene
CT0038508 --> .................................................. Control
CT0000684 --> .................................................. Control
CT0002286 --> .................................................. Control
301 - 351
RU01636 --> CCTATGAATGCTGGAGAAGAAACTTCTCGAGTGACTACTTCAGGACCTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- CCTATGAATGCTGGAGAAGAAACTTCTCGAGTGACTACTTCAGGACCTTC
CT0042480 <-- CCTATGAATGCTGGAGAAGAAACTTCTCGAGTGACTACTTCAGGACCTTC
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> CCTA..............................................
ET0126565 --> ..................................................
ET0091633 --> CCTATGAATGCTGGAGAAGAAACTTCTCGAGTGACTACTTCAGGACCTTC
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
351 - 401
RU01636 --> TTCTCAATCTGGTCCTGTTTCTGCCTCAGCATCTGGATCTAGTGTCCCTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- TTCTCAATCTGGTCCTGTTTCTGCCTCAGCATCTGGATCTAGTGTCCCTC
CT0042480 <-- TTCTCAATCTGGTCCTGTTTCTGCCTCAGCATCTGGATCTAGTGTCCCTC
CT0110943 <-- ....................................ATCTAGTGTCCCTC
CT0113024 <-- ....................................ATCTAGTGTCCCTC
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> TTCTCAATCT........................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
401 - 451
RU01636 --> CATCCAATCAAC-ATGGGTCTTCCATAAGTACTAGGAGGTCTCCTAATCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- CATCCAATCAAC-ATGGGTCTTCCATAAGTACTAGGAGGTCTCCTAATCA
CT0042480 <-- CATCCAATCAAC-ATGGGTCTTCCATAAGTACTAGGAGGTCTCCTAATCA
CT0110943 <-- CATCCAATCAACCATGGGTCTTCCATAAGTACTAGGAGGTCTCCTAATCA
CT0113024 <-- CATCCAATCAAC-ATGGGTCTTCCATAAGTACTAGGAGGTCTCCTAATCA
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
451 - 501
RU01636 --> GTCATCCCCAAGTAGCCAAGATAGAGCTGGGCCATCAGATTTACAGTCAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- GTCATCCCCAAGTAGCCAAGATAGAGCTGGGCCATCA.............
CT0042480 <-- GTCATCCCCAAGTAGCCAAGATAGAGCTGGGCCATCA.............
CT0110943 <-- GTCATCCCCAAGTAGCCAAGATAGAGCTGGGCCATCAGATTTACAGTCAT
CT0113024 <-- GTCATCCCCAAGTAGCCAAGATAGAGCTGGGCCATCAGATTTACAGTCAT
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ......CCCAAGTAGCCAAGATAGAGCTGGGCCATCAGATTTACAGTCAT
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
501 - 551
RU01636 --> TTTCAGAAAATCTGAAGGCTCGATTCAGTGCAGTGTCAATGAAATACAAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- TTTCAGAAAATCTGAAGGCTCGATTCAGTGCAGTGTCAATGAAATACAAA
CT0113024 <-- TTTCAGAAAATCTGAAGGCTCGATTCAGTGCAGTGTCAATGAAATACAAA
ET0144289 <-- .........taCTGAAGGCTCGATTCAGTGCAGTGTCAATGAAATACAAA
ET0146407 <-- .........taCTGAAGGCTCGATTCAGTGCAGTGTCAATGAAATACAAA
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> TTTCAGAAAATCTGAAGGCTCGATTCAGTGCAGTGTCAATGAAATACAAA
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
551 - 601
RU01636 --> GAGTCGATTTCAAAGAGCACAAGAGGTTGGAAGGAGAGATTGTTCTCTCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- GAGTCGATTTCAAAGAGCACAAGAGGTTGGAAGGAGAGAT..........
CT0113024 <-- GAGTCGATTTCAAAGAGCACAAGAGGTTGGAAGGAGAGAT..........
ET0144289 <-- GAGTCGATTTCAAAGAGCACAAGAGGTTGGAAGGAGAGATTGTTCTCTCG
ET0146407 <-- GAGTCGATTTCAAAGAGCACAAGAGGTTGGAAGGAGAGATTGTTCTCTCG
ET0055265 <-- ...............AGCACAAGAGGTTGGAAGGAGAGATTGTTCTCTCG
ET0080723 <-- ...............AGCACAAGAGGTTGGAAGGAGAGATTGTTCTCTCG
ET0081518 <-- ...............AGCACAAGAGGTTGGAAGGAGAGATTGTTCTCTCG
ET0080214 <-- ................GCACAAGAGGTTGGAAGGAGAGATTGTTCTCTCG
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> GAGTCGATTTCAAAGAGCACAAGAGGTTGGAAGGAGAGATTGTTCTCTCG
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
601 - 651
RU01636 --> CAACAGTTCCGTTTCCGATCTTGGTCCCGAAGTTAAAAGAGAGGTTGATG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- CAACAGTTCCGTTTCCGATCTTGGTCCCGAAGTTAAAAGAGAGGTTGATG
ET0146407 <-- CAACAGTTCCGTTTCCGATCTTGGTCCCGAAGTTAAAAGAGAGGTTGATG
ET0055265 <-- CAACAGTTCTGTTTCCGATCTTGGTCCCGAAGTTAAAAGAGAGGTTGATG
ET0080723 <-- CAACAGTTCTGTTTCCGATCTTGGTCCCGAAGTTAAAAGAGAGGTTGATG
ET0081518 <-- CAACAGTTCTGTTTCCGATCTTGGTCCCGAAGTTAAAAGAGAGGTTGATG
ET0080214 <-- CAACAGTTCTGTTTCCGATCTTGGTCCCGAAGTTAAAAGAGAGGTTGATG
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> CAACAGTTCTGTTTCCGATCTTGGTCCCGAAGTTAAAAGAGAGGTTGATG
CT0064276 --> ..................................AAAAGAGAGGTTGATG
CT0009561 --> ..........................................GGTTGATG
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
651 - 701
RU01636 --> AAGGGATTGCAACAGTATCACGCATGATGGAGCGTCTGGAAACAAGAGAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- AAGGGATTGTAACAGTATCACGCATGATGGAGCGTCTGGAAACAAGAGAA
ET0146407 <-- AAGGGATTGTAACAGTATCACGCATGATGGAGCGTCTGGAAACAAGAGAA
ET0055265 <-- AAGGGATTGCAACAGTATCACGCATGATGGAGCGTCTGGAAACAAGAGAA
ET0080723 <-- AAGGGATTGCAACAGTATCACGCATGATGGAGCGTCTGGAAACAAGAGAA
ET0081518 <-- AAGGGATTGCAACAGTATCACGCATGATGGAGCGTCTGGAAACAAGAGAA
ET0080214 <-- AAGGGATTGCAACAGTATCACGCATGATGGAGCGTCTGGAAACAAGAGAA
CT0008028 <-- ......................CATGATGGAGCGTCTGGAAACAAGAGAA
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> AAGGGATTG.........................................
CT0064276 --> AAGGGATTGCAACAGTATCACGCATGATGGAGCGTCTGGAAACAAGAGAA
CT0009561 --> AAGGGATTGCAACAGTATCACGCATGATGGAGCGTCTGGAAACAAGAGAA
CT0087632 --> ............................GGAGCGTCTGGAAACAAGAGAA
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
701 - 751
RU01636 --> AATAATAGAATCAATGGTGCTTCTGGATCAGATAGTATAAACAGTTCAGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- AATAATAGAATCAATGGTGCTTCTGGATCAGATAGTATAAACAGTTCAGT
ET0146407 <-- AATAATAGAATCAATGGTGCTTCTGGATCAGATAGTATAAACAGTTCAGT
ET0055265 <-- AATAATAGAATCAATGGTGCTTCTGGATCAGATGGTATAAACAGTTCAGT
ET0080723 <-- AATAATAGAATCAATGGTGCTTCTGGATCAGATGGTATAAACAGTTCAGT
ET0081518 <-- AATAATAGAATCAATGGTGCTTCTGGATCAGATGGTATAAACAGTTCAGT
ET0080214 <-- AATAATAGAATCAATGGTGCTTCTGGATCAGATGGTATAAACAGTTCAGT
CT0008028 <-- AATAATAGAATCAATGGTGCTTCTGGATCAGATGGTATAAACAGTTCAGT
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> AATAATAGAATCAATGGTGCTTCTGGATCAGATAGTATAAACAGTTCAGT
CT0009561 --> AATAATAGAATCAATGGTGCTTCTGGATCAGATGGTATAAACAGTTCAGT
CT0087632 --> AATAATAGAATCAATGGTGCTTCTGGATCAGATGGTATAAACAGTTCAGT
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
751 - 801
RU01636 --> TCCCGAATCAGAAAATAGGCGAATATCAGAAAATGGTGGT-CAAAATTCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- TCCCGAATCAGAAAATAGGCGAATATCAGAAAATGGTGGT-CAAAATTCT
ET0146407 <-- TCCCGAATCAGAAAATAGGCGAATATCAGAAAATGGTGGT-CAAAATTCT
ET0055265 <-- TCCCGAATCAGAAAATAGGCt.............................
ET0080723 <-- TCCCGAATCAGAAAATAGGCt.............................
ET0081518 <-- TCCCGAATCAGAAAATAGGCt.............................
ET0080214 <-- TCCCGAATCAGAAAATAGGCt.............................
CT0008028 <-- TCCCGAATCAGAAAATAGGCGAATATCAGAAAATGGTGGT-CAAAATTCT
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> TCCCGAATCAGAAAATAGGCGAATATCAGAAAATGGGGGTACAAAATTCT
CT0009561 --> TCCCGAATCAGAAAATAGGCGAATATCAGAAAATGGTGGT-CAAAATTCT
CT0087632 --> TCCCGAATCAGAAAATAGGCGAATATCAGAAAATGGTGGT-CAAAATTCT
ET0088934 --> ...........................AGAAAATGGTGGT-CAAAATTCT
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
801 - 851
RU01636 --> CTGAGTGAGCAGAATAAGCCAGCTACATGTGCTGCTGGCTCTAGTTCAAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- CTGAGTGAGCAGAAT...................................
ET0146407 <-- CTGAGTGAGCAGAAT...................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- CTGAGTGAGCAGAATAAGCCAGCTACATGTGCTGCTGGC...........
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> CTGAGTGAGCAGAAT...................................
CT0009561 --> CTGAGTGAGCAGAATAAGCCAGCTACATGTGCTGCTGGCTC.........
CT0087632 --> CTGAGTGAGCAGAATAAGCCAGCTACATGTGCTGCTGGCTCTAGTTCAAA
ET0088934 --> CTGAGTGAGCAGAATAAGCCAGCTACATGTGCTGCAGGCTCTAGTTCAAA
ET0082304 --> ......GAGCAGAATAAGCCAGCTACATGTGCTGCTGGCTCTAGTTCAAA
ET0085923 --> ......GAGCAGAATAAGCCAGCTACATGTGCTGCTGGCTCTAGTTCAAA
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
851 - 901
RU01636 --> TTAGAAATTATTCAGCAATTGCAGTGAAGTCAAAGCATTTGCTTTTATAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> TTAGAAATTATTCAGCAATTGCAGTGAAGTCAAAGCATTTGCTTTTAaag
ET0088934 --> TTAGAAATTATTCAGCAATTGCATTGAAGTCAAAGCGTTTGCTTTTATAA
ET0082304 --> TTAGAAATTATTCAGCAATTGCAGTGAAGTCAAAGCATTTGCTTTTATAA
ET0085923 --> TTAGAAATTATTCAGCAATTGCAGTGAAGTCAAAGCATTTGCTTTTATAA
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
901 - 951
RU01636 --> GGTGGAATTCTCTCTTTTCCGGTTACCAGATCTTGTTTGCCATACCCTTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> c.................................................
ET0088934 --> GGTGGAATTCTCTCTTTTCCGGTTACCAGATCTTGTTTGCCATACCCTTC
ET0082304 --> GGTGGAATTCTCT.....................................
ET0085923 --> GGTGGAATTCTCT.....................................
ET0000059 --> ..................................................
ET0000802 --> ..................................................
ET0002787 --> ..................................................
CT0038508 --> ..................................................
CT0000684 --> ..................................................
CT0002286 --> ..................................................
951 - 1001
RU01636 --> CGGACTTCCAGTGGATATTCCTTTTACATTTGGAAAGGGCATTGTTGAGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ..................................................
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> CGGACTTCCAGTGGATATTCCTTTTACATTTGGAAAGGGCATTGTTGAGT
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> ..........................................tgcTGAGT
ET0000802 --> ..........................................tgcTGAGT
ET0002787 --> ..........................................tgcTGAGT
CT0038508 --> ...........................................gagtgcg
CT0000684 --> ..................................................
CT0002286 --> ..................................................
1001 - 1051
RU01636 --> AAGATCTGATTCAGAATAAAGAAACTACAGAATGCTCTACTACTTAGACC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- ......TGATTCAGAATAAAGAAACTACAGAATGCTCTACTACTTAGACC
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> AAGATCTGATTCAGAATAAAGAAACTA.......................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> AAGATCTGATTCAGAATAAAGAAACTACAGAATGCTCTACTACTTAGACC
ET0000802 --> AAGATCTGATTCAGAATAAAGAAACTACAGAATGCTCTACTACTTAGACC
ET0002787 --> AAGATCTGATTCAGAATAAAGAAACTACAGAATGCTCTACTACTTAGACC
CT0038508 --> tctcTCTGATTCAGAATAAAGAAACTACAGAATGCTCTACTATTTAGACC
CT0000684 --> ..................................................
CT0002286 --> ..................................................
1051 - 1101
RU01636 --> TGGATATCATCACATGCTTGTATATATGTTTATATTATAACTTATTTATG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- TGGATATCATCACATGCTTGTATATATGTTTATATTATAACTTATTTATG
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> TGGATATCATCACATGCTTGTATATATGTTTATATTATAACTTATTTATG
ET0000802 --> TGGATATCATCACATGCTTGTATATATGTTTATATTATAACTTATTTATG
ET0002787 --> TGGATATCATCACATGCTTGTATATATGTTTATATTATAACTTATTat..
CT0038508 --> TGGATATCATCACATGCTTGTATATATGTTTATATTATAACTTATTTATG
CT0000684 --> .............................TTATATTATAACTTATTTATG
CT0002286 --> .............................TTATATTATAACTTATTTATG
1101 - 1151
RU01636 --> AATATATTTTGGATGTATGCATAGGCTCACTAGATGTTTCGAAAGATTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- AATATATTTTGGATGTATGCATAGGCTCACTAGATGTTTCGAAAGATTTT
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> AATATATTTTGGATGTATGCATAGGCTCACTAGATGTTTCGAAAGATTTT
ET0000802 --> AATATATTTTGGATGTATGCATAGGCTCACTAGATGTTTCGAAAGATTTT
ET0002787 --> ..................................................
CT0038508 --> AATATATTTTGGATGTATGCATAGGCTCACTAGATGTTTCGAAAGATTTT
CT0000684 --> AATATATTTTGGATGTATGCATAGGCTCACTAGATGTTTCGAAAGATTTT
CT0002286 --> AATATATTTTGGATGTATGCATAGGCTCACTAGATGTTTCGAAAGATTTT
1151 - 1201
RU01636 --> TGGCCAATACATACATGTATCCTCTGTTGTCTTCTCATGGGAAA-ATTAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ..................................................
CT0042480 <-- ..................................................
CT0110943 <-- ..................................................
CT0113024 <-- ..................................................
ET0144289 <-- ..................................................
ET0146407 <-- ..................................................
ET0055265 <-- ..................................................
ET0080723 <-- ..................................................
ET0081518 <-- ..................................................
ET0080214 <-- ..................................................
CT0008028 <-- ..................................................
CT0015868 <-- TGGCCAATACATACATGTATCCTCTGTTGTCTACTCAT............
CT0056707 --> ..................................................
ET0118701 --> ..................................................
ET0126565 --> ..................................................
ET0091633 --> ..................................................
CT0023426 --> ..................................................
CT0064276 --> ..................................................
CT0009561 --> ..................................................
CT0087632 --> ..................................................
ET0088934 --> ..................................................
ET0082304 --> ..................................................
ET0085923 --> ..................................................
ET0000059 --> TGGCCAATACATACATGTATCCTCTGTTGTCTTCTCATGGGAAA-ATTAA
ET0000802 --> TGGCCAATACATACATGTATCCTCTGTTGTCTTCTCATGGGAAA-ATTAA
ET0002787 --> ..................................................
CT0038508 --> TGGCTAATACATACATGTATCCTCTGTTGTCTTCTCATGGGAAA-TTTAA
CT0000684 --> TGGCTAATACATACATGTATCCTCTGTTGTCTTCTCATGGGAAA-TTTAA
CT0002286 --> TGGCTAATACATACATGTATCCTCTGTTGTCTTCTCATGGGAAATTTTAA
1201 - 1251
RU01636 --> CTTT-GCATTAAAATTCTAGTG
~~~~~~~~~~~~~~~~~~~~~~
CT0058414 <-- ......................
CT0042480 <-- ......................
CT0110943 <-- ......................
CT0113024 <-- ......................
ET0144289 <-- ......................
ET0146407 <-- ......................
ET0055265 <-- ......................
ET0080723 <-- ......................
ET0081518 <-- ......................
ET0080214 <-- ......................
CT0008028 <-- ......................
CT0015868 <-- ......................
CT0056707 --> ......................
ET0118701 --> ......................
ET0126565 --> ......................
ET0091633 --> ......................
CT0023426 --> ......................
CT0064276 --> ......................
CT0009561 --> ......................
CT0087632 --> ......................
ET0088934 --> ......................
ET0082304 --> ......................
ET0085923 --> ......................
ET0000059 --> CTTT-GCATTAAAATTCTAGTG
ET0000802 --> CTTT-GCATTAAAATTCTAGTG
ET0002787 --> ......................
CT0038508 --> CTTT-GCATTAAAAa.......
CT0000684 --> CTTT-GCATT............
CT0002286 --> CTTTTGCATT............
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