1 - 51
RU01888 --> GCTTGGTCATTGTGGACTGGCAGCAATTAAGCCCATTTATGGTACTGGTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> GCTTGGTCATTGTGGACTGGCAGCAATTAAGCCCATTTATGGTACTGGTG
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
51 - 101
RU01888 --> TCCATCTCACAGCGGCTAGCTTCTCCAACACCTGTGCAAGTTATTGTGAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> TCCATCTCACAGCGGCTAGCTTCTCCAACACCTGTGCAAGTTATTGTGAC
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
101 - 151
RU01888 --> GTTGATGAAAATGGAGTACGGCACATGATATTCTGTCGTGTCATAATGGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- .......................CATGATATTCTGTCGTGTCATAATGGG
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> GTTGATGAAAATGGAGTACGGCACATGATATTCTGTCGTGTCATAATGGG
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
151 - 201
RU01888 --> AAATATGGAGTTACTTCACCCTGAAAGTAAA-CAGTTTCATCCCTGCAGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- AAATATGGAGTTACTTCACCCTGAAAGTAAAACAGTTTCATCCCTGCAGT
CT0018715 <-- .................................AGTTTCATCCCTGCAGT
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> AAATATGGAGTTACTTCA................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
201 - 251
RU01888 --> CAAGATTATGATAGTGGAGTGGATGATCTTCAGGAT-CCAAAAAATTACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- CAAGATTATGATAGTGGAGTGGATGATCTTCAGGATACCAAAAAATTACA
CT0018715 <-- CAAGATTATGATAGTGGAGTGGATGATCTTCAGGAT-CCAAAAAATTACA
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
251 - 301
RU01888 --> TTGTCTGGAATATGAACATCAATACACACATATATCCAG-AATTTGTTGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- TTGTCTGGAATATGAACATCAATACACACATATATCCAGTAATTTGTTGT
CT0018715 <-- TTGTCTGGAATATGAACATCAATACACACATATATCCAG-AA........
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
301 - 351
RU01888 --> TAGTTTCAAGCTCTCATCCAATACTGAAGGACATCCAATTGGAAGTGAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- TAGTTTCAAGCTCTCATCCAATACTGAAGGACATCCAATTGGAAGTGAGA
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
351 - 401
RU01888 --> AAAA-GCATGGAGTTTCAGGGGTTACGACATACGTCCAGGGACGCTTTtt
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- AAAAAGCATGGAGTTTCAGGGGTTACGACATACGTCCAGGGACGCTTT..
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
401 - 451
RU01888 --> gcaattacagtcacctgcaattgataaagctaCTACTGGTTCTACCACTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ................................CTACTGGTTCTACCACTC
ET0112584 --> ................................CTACTGGTTCTACCACTC
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
451 - 501
RU01888 --> AAAGGACCCCTAAATCACCTTGGATGCCTTTCCCTATGTTATTTGCTGCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> AAAGGACCCCTAAATCACCTTGGATGCCTTTCCCTATGTTATTTGCTGCT
ET0112584 --> AAAGGACCCCTAAATCACCTTGGATGCCTTTCCCTATGTTATTTGCTGCT
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
501 - 551
RU01888 --> ATTGCAAGTAAAATTCCTCCCAAGGATATGGAACAAGTTAATGTTCATTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ATTGCAAGTAAAATTCCTCCCAAGGATATGGAACAAGTTAATGTTCATTA
ET0112584 --> ATTGCAAGTAAAATTCCTCCCAAGGATATGGAACAAGTTAATGTTCATTA
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
551 - 601
RU01888 --> TGACTTTTTCAGGGCAAAGAAG-ATAACCCGT-GAGGAATTTGTAGAGAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> TGACTTTTTCAGGGCAAAGAAG-ATAACCCGT-GAGGAATTTGTAGAGAA
ET0112584 --> TGACTTTTTCAGGGCAAAGAAG-ATAACCCGT-GAGGAATTTGTAGAGAA
ET0022425 --> ................AAGAAGTATAACCCGTTGAGGAATTTGTAGAGAA
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
601 - 651
RU01888 --> GCTGAGGTTGACTGTTGGAGATAGTTTATTGAGGTCTACAATAACGGAAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- .........GACTGTTGGAGA-AGTTTATTGAGGTCTACAATAACGGAAC
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> GCTGAG............................................
ET0112584 --> GCTGAG............................................
ET0022425 --> GCTGAGGTTGACTGTTGGAGATAGTTTATTGAGGTCTACAATAACGGAAC
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ..................................................
CT0067714 --> ..................................................
651 - 701
RU01888 --> TTCAATGCAAGAT-ACCCTTT-AAATCTAAGAGTGAATTGGGAGTGCCAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- TTCAATGCAAGAT-ACCCTTT-AAATCTAAGAGTGAATTGGGAGTGCCAA
CT0108409 <-- ..................................................
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> TTCAATGCAAGAT-ACCCTTT-AAATCTAAGAGTGAATTGGGAGTGTCAA
CT0050002 --> ........AAGAT-ACCCTTT-AAATCTAAGAGTGAATTGGGAGTGCCAA
ET0115414 --> ....gtctAAGATTACCCTTTTAAATCTAAGAGTGAATTGGGAGTGCCAA
CT0055218 --> ..................................................
CT0067714 --> ..................................................
701 - 751
RU01888 --> GGTCAGCCC-GCCACTGAATGTGGTTTATGGCCCTTGCATGGAGTTTTGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- GGTCAGCCC-GCCACTGAATGTGGTTTATGGCCCTTGCATGGAGTTTTGG
CT0108409 <-- ...................................TGCATGGAGTTTTGG
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> GGACAGCCC-GCCACTGAATGTGGTTTATGGCCCTTGCATGGAGTTTCGG
CT0050002 --> GGTCAGCCCCGCCACTGAATGTGGTTTATGGCCCTTGCATGGAGTTTTGG
ET0115414 --> GGTCAGCCC-GCCACTGAATGTGGTTTATGGCCCTTGCATGGAGTTTTGG
CT0055218 --> ..................................................
CT0067714 --> ..................................................
751 - 801
RU01888 --> ATATGTGACAAAGATGCTGATTTGAAGCTTGCAT-GTAAAAATGCGTCGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ATATGTGACAAAGATGCTGATTTGAAGCTTGCAT-GTAAAAATGCGTCGA
CT0108409 <-- ATATGTGACAAAGATGCTGATTTGAAGCTTGCAT-GTAAAAATGCGTCGA
ET0019076 <-- ..................................................
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ATATGTGACAAAc.....................................
CT0050002 --> ATATGTGACAAAGATGCTGATTTGAAGCTTGCATAGTAAAAATGCGTCGA
ET0115414 --> ATATGTGACAAAGATGCTGATTTGAAGCTTGCAT-GTAAAAATGCGTCGA
CT0055218 --> ..................................................
CT0067714 --> ..................................................
801 - 851
RU01888 --> CATAAATTGTTGTGAATACGATGATGGACCAGGCAAAGGTCTTCAGTTTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- CATAAATTGTTGTGAATACGATGATGGACCA...................
CT0108409 <-- CATAAATTGTTGTGAATACGATGATGGACCAGGCAAAGGTCTTCAGTTTA
ET0019076 <-- ..........TGTGAATACGATGATGGACCAGGCAAAGGTCTTCAGTTTA
ET0059854 <-- ..................................................
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> CATAAATTGTTGTGAATACGATGATGGACCAGG.................
ET0115414 --> CATAAATTGTT.......................................
CT0055218 --> ...........................................CAGTTTA
CT0067714 --> ...........................................CAGTTTA
851 - 901
RU01888 --> GGAACATCCAATTGCTTTCTTCTGAGTGGTTATATTTACTTTTAGCTTGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- GGAACATTCAATTGCTTTCTTTTGAGTGGTTATATCTACTTTTAGCTTGT
ET0019076 <-- GGAACATCCAATTGCTTTCTTCTGAGTGGTTATATTTACTTTTAGCTTGT
ET0059854 <-- ........CAATTGCTTTCTTCTGAGTGGTTATATTTACTTTTAGCTTGT
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> GGAACATCCAATTGCTTTCTTCTGAGTGGTTATATTTACTTTTAGCTTGT
CT0067714 --> GGAACATCCAATTGCTTTCTTCTGAGTGGTTATATTTACTTTTAGCTTGT
901 - 951
RU01888 --> ATTATGTGAGTACGTGGAGTAGCATTTGAACAGTATTATACTGATGTCTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ATTATGTGAGTACGTGGAGTAGCATTTGAACAGTATTATACTGATGTCTT
ET0019076 <-- ATTATGTGAGTACGTGGAGTAGCATTTGAACAGTATTATACTGATGTCTT
ET0059854 <-- ATTATGTGAGTACGTGGAGTAGCATTTGAACAGTATTATACTGATGTCTT
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> ATTATGTGAGTACGTGGAGTAGCATTTGAACAGTATTATACTGATGTCTT
CT0067714 --> ATTATGTGAGTACGTGGAGTAGCATTTGAACAGTATTATACTGATGTCTT
951 - 1001
RU01888 --> TTAATCTGAATTGATATCATCTACTG-ACGTTTTTTTTTGTTTTTTAATA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- .................................................. Control
CT0018715 <-- .................................................. Control
CT0004271 <-- .................................................. Control
CT0108409 <-- TTAATCTG.......................................... Control
ET0019076 <-- TTAATCTGAATTGATATCATCTACTG-ACGTTTTTTTTTGTTTTTTAATA Ethylene
ET0059854 <-- TTAATCTGAATTGATATCATCTACTG-ACGTTTTTTTTTTGTTTTTAATA Ethylene
CT0098956 --> .................................................. Control
ET0109754 --> .................................................. Ethylene
ET0112584 --> .................................................. Ethylene
ET0022425 --> .................................................. Ethylene
CT0050002 --> .................................................. Control
ET0115414 --> .................................................. Ethylene
CT0055218 --> TTAATCTGAATTGATATCATCTACTGTACGTTTTTTTTTGTTT--AAATA Control
CT0067714 --> TTAATCTGAATTGATATCATCTACTG-ACGTTTTTTTTTGTTTT--AATA Control
1001 - 1051
RU01888 --> AGA-T-ATTTTTTTGTATCAGAGTAGTGACTTTGTTGCGTTATACCAAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0138513 <-- ..................................................
CT0018715 <-- ..................................................
CT0004271 <-- ..................................................
CT0108409 <-- ..................................................
ET0019076 <-- AGA-T-ATTTTTTTGTATCAGAGTAGTGACTTTGTTGCGTTATACCAAGA
ET0059854 <-- AGA-T-ATTTTTTTGT..................................
CT0098956 --> ..................................................
ET0109754 --> ..................................................
ET0112584 --> ..................................................
ET0022425 --> ..................................................
CT0050002 --> ..................................................
ET0115414 --> ..................................................
CT0055218 --> AGATT-ATTTTTTTtg..................................
CT0067714 --> AGA-TTATTTTTTTtgat................................
1051 - 1101
RU01888 --> CAATATGGATTGTTGGT
~~~~~~~~~~~~~~~~~
CT0138513 <-- .................
CT0018715 <-- .................
CT0004271 <-- .................
CT0108409 <-- .................
ET0019076 <-- CAATATGGATTGTTGGT
ET0059854 <-- .................
CT0098956 --> .................
ET0109754 --> .................
ET0112584 --> .................
ET0022425 --> .................
CT0050002 --> .................
ET0115414 --> .................
CT0055218 --> .................
CT0067714 --> .................
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