SNPs of unigene RU01952
               1      -     51
RU01952        --> GCCACCTGAATTGCCTAGCGATCCCTGGAGTAACGATGAGCTGCTTGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> GCCACCTGAATTGCCTAGCGATCCCTGGAGTAACGATGAGCTGCTTGCAC
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               51     -    101
RU01952        --> TGCTCCGGATCAGATCTACCATGGAGAATTGGTTCCCTGAGTTCACTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> TGCTCCGGATCAGATCTACCATGGAGAATTGGTTCCCTGAGTTCACTTGG
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               101    -    151
RU01952        --> GAACATGTCTCAAGAAAGCTTGCAGAGGTTGGCTTTAAAAGGAGTGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> GAACATGTCTCAAGAAAGCTTGCAGAGGTTGGCTTTAAAAGGAGTGCAGA
CT0097881      --> ............................gTGGCATTCAAAGGAGTGCAGA
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               151    -    201
RU01952        --> GAAGTGCAAGGAGAAGTTTGAAGAGGAAAGCAGGTACTTCAACAACATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> GAAGTGCAAGGAGAAGTTTGAAGAGGAAAGCAGG................
CT0097881      --> GAAGTGCAAGGAGAAGTTTGAAGAGGAAAGCAGGTACTTCAACAACATCA
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               201    -    251
RU01952        --> ACTTCAACAAGAACTTCAGGTTTCTTAGTGAGCTTGAGCAGCTCTATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ACTTCAACAAGAACTTCAGGTTTCTTAGTGAGCTTGAGCAGCTCTATCAA
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               251    -    301
RU01952        --> CCACCAGTTGAGCCACCTCAAAACGTAGCTGAAGAT-CAACCA-GAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..............................GAAGATACAACCAAGAAAAG
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> CCACCAGTTGAGCCACCTCAAAACGTAGCTGAAGAT-CAACCA-GAAAAG
CT0135910      --> .....................................CAACCA-GAAAAG
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               301    -    351
RU01952        --> AATACCGAAAAAGTAGTAGAAGTTGAAAAGCCAAGTGAAGAACTAGGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- AATACCGAAAAAGTAGTAGAAGTTGAAAAGCCAAGTGAAGAACTAGGAAA
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> AATACCGAAAAAGTAGTAGAAGTTGAAAAGCCAAGTGAAGAACTAGGAAA
CT0135910      --> AATACCGAAAAAGTAGTAGAAGTTGAAAAGCCAAGTGAAGAACTAGGAAA
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               351    -    401
RU01952        --> CCAAGATAAAGGCCAAA-CAGCTTTGGATCCTCAAGAGTCACCAAGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- CCAAGATAAAGGCCAAA-CAGCTTTGGATCCTCAAGAGTCACCAAGCAAT
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> CCAAGATAAAGGCCAAAACAGCTTTGGATCCTCAAG..............
CT0135910      --> CCAAGATAAAGGCCAAA-CAGCTTTGGATCCTCAAGAGTCACCAAGCAAT
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               401    -    451
RU01952        --> GATCAAACAGTTAGTGAGACACAGGTAGAGATTGGTAGAGCAAAGAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- GATCAAACAGTTAGTGAGACACAGGTtttagacatccgttct........
ET0042435      <-- ............................................aAGCAA
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> GATCAAACAGTTAGTGAGACACAGGTAGAGATTGGTAGAGCAAAGAGCAA
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               451    -    501
RU01952        --> CAACAAGAAGAGGAAGAGGCA-AGGAGATTTGAAATGCTGAAAGGTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- CAACAAGAAGAGGAAGAGGCA-AGGAGATTTGAAATGCTGAAAGGTTTCT
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> CAACAAGAAGAGGAAGAGGCAGAGGAGATTTGAAATGCTGAAAGGTTTCT
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               501    -    551
RU01952        --> GTGAAGACATAGTGAACAAGTTGATGGCTCAGCAAGAAGAGACTCACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- GTGAAGACATAGTGAACAAGTTGATGGCTCAGCAAGAAGAGACTCACAGT
CT0130714      <-- ......ACATAGTGAACAAGTTGATGGCTCAGCAAGAAGAGACTCACAGT
CT0131104      <-- ......ACATAGTGAACAAGTTGATGGCTCAGCAAGAAGAGACTCACAGT
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> GTGAAGACATAGTGAACAAGTTGATGGCTCAGCAAGAAGAGACTCACAGT
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               551    -    601
RU01952        --> AAGCTACTTGAAGACATGGTGAGGAGAGATGAAGAGAAGCTTGCAAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- AAGCTACTTGAAGACATGGTGAGGAGAGATGAAGAGAAGCTTGCAAAGGA
CT0130714      <-- AAGCTACTTGAAGACATGGTGAGGAGAGATGAAGAGAAGCTTGCAAAGGA
CT0131104      <-- AAGCTACTTGAAGACATGGTGAGGAGAGATGAAGAGAAGCTTGCAAAGGA
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> AAGCTACTTGAAGACATGGTGAGGAGAGATGAAGAGAAG...........
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               601    -    651
RU01952        --> AGAAGCTTGGAAGAAACAAGAGATGGATAGGATGAACAAGGAGCTTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- AGAAGCTTGGAAGAAACAAGAGATGGATAGGATGAACAAGGAGCTTGAAA
CT0130714      <-- AGAAGCTTGGAAGAAACAAGAGATGGATAGGATGAACAAGGAGCTTGAAA
CT0131104      <-- AGAAGCTTGGAAGAAACAAGAGATGGATAGGATGAACAAGGAGCTTGAAA
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> .gaaggcTGGAAGAAACAAGAGATGGATAGGATGAACAAGGAGCTTGAAA
CT0061253      --> ..........................ATAGGATGAACAAGGAGCTTGAAA
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               651    -    701
RU01952        --> CCATGGCACATGAACAAGCTGTTGCAGGTGATAGACAAGCTACAATTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- CCATGGCACATGAACAAG................................
CT0130714      <-- CCATGGCACATGAACAAGCTGTTGCAGGTG....................
CT0131104      <-- CCATGGCACATGAACAAGCTGTTGCAGGTGATAGACA.............
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> CCATGGCACATGAACAAGCTGTTGCAGGTGATAGACAAGCTACAATTATT
CT0061253      --> CCATGGCACATGAACAAGCTGTTGCAGGTGATAGACAAGCTACAATTATT
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               701    -    751
RU01952        --> CAGTTCTTGAAGAAATTCACATCATCAGCTAGTACTAGTAGTAGTACTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> CAGTTCTTGAAGAAATTCACATCATCAGCTAGTACTAGTAGTAGTACTAA
CT0061253      --> CAGTTCTTGAAGAAATTCACATCATCAGCTAGTACTAGTAGTAGTACTAA
CT0001567      --> ................TCACATCATCAGCTAGTACTAGTAGTAGTACTAA
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               751    -    801
RU01952        --> CCCTAGTAATGGCCAAAAGGAAAATGATCAAGAACCAATTACATCATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> CCCTAGTAATGGCCAAAAGGAAAATGATCAAGAACCAATTACATCATCCA
CT0061253      --> CCCTAGTAATGGCC....................................
CT0001567      --> CCCTAGTAATGGCCAAAAGGAAAATGATCAAGAACCAATTACATCATCCA
ET0007486      --> .............................AAGAACCAATTACATCATCCA
ET0028034      --> .............................AAGAACCAATTACATCATCCA
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               801    -    851
RU01952        --> CAATGGTCCCATCTGCAAGCAATGTTCACAAGTCTACTACTACTACTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ...................CAATGTTCACAAGTCTACTACTACTACTTCT
ET0121236      <-- ...................CAATGTTCACAAGTCTACTACTACTACTTCT
ET0121958      <-- ...................CAATGTTCACAAGTCTACTACTACTACTTCT
ET0122630      <-- ...................CAATGTTCACAAGTCTACTACTACTACTTCT
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> CAATGGTCCCATCTGCAAGCAATGTTCA......................
CT0061253      --> ..................................................
CT0001567      --> CAATGGTCCCATCTGCAAGCAATGTTCACAAGTCTACTACTACTACTTCT
ET0007486      --> CAATGGTCCCATCTGCAAGCAATGTTCACAAGTCTACTACTACTACTTCT
ET0028034      --> CAATGGTCCCATCTGCAAGCAATGTTCACAAGTCTACTACTACTACTTCT
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               851    -    901
RU01952        --> TTCCACACCCAAAATAATCCAAGCACACCCACTTCACTGACCGAAGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................  Control
ET0042435      <-- ..................................................  Ethylene
CT0130714      <-- ..................................................  Control
CT0131104      <-- ..................................................  Control
ET0115371      <-- TTCCACACCCAAAATAATCCAAGCACACCCACTTCACTGACCGAAGCCAT  Ethylene
ET0121236      <-- TTCCACACCCAAAATAATCCAAGCACACCCACTTCACTGACCGAAGCCAT  Ethylene
ET0121958      <-- TTCCACACCCAAAATAATCCAAGCACACCCACTTCACTGACCGAAGCCAT  Ethylene
ET0122630      <-- TTCCACACCCAAAATAATCCAAGCACACCCACTTCACTGACCGAAGCCAT  Ethylene
CT0063699      <-- ..................................................  Control
ET0048638      <-- ..................................................  Ethylene
ET0059321      <-- ..................................................  Ethylene
CT0068383      --> ..................................................  Control
CT0097881      --> ..................................................  Control
CT0135910      --> ..................................................  Control
CT0002843      --> ..................................................  Control
CT0061253      --> ..................................................  Control
CT0001567      --> T.................................................  Control
ET0007486      --> TTCCACACCCAAAATAATCCAAGCACACCCACTTCACTGACCGAAGCCAT  Ethylene
ET0028034      --> TTCCACACCCAAAATAATCCAAGCACACCCACTTCACTGACCGAAGCCAT  Ethylene
CT0055129      --> .................TCCAAGCACACCCACTTCACTGACCGAAGCCAG  Control
CT0062408      --> .................TCCAAGCACACCCACTTCACTGACCGAAGCCAG  Control
CT0115868      --> ..................................................  Control
ET0082007      --> ..................................................  Ethylene
ET0128086      --> ..................................................  Ethylene

               901    -    951
RU01952        --> TGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- TGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGC
ET0121236      <-- TGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGC
ET0121958      <-- TGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGC
ET0122630      <-- TGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGC
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> TGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGC
ET0028034      --> TGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGC
CT0055129      --> TGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGC
CT0062408      --> TGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGC
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               951    -   1001
RU01952        --> CCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCCGATCATCT-CAAAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- CCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCCGATCATCT-CAAAA-
ET0121236      <-- CCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCCGATCATCT-CAAAA-
ET0121958      <-- CCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCCGATCATCT-CAAAA-
ET0122630      <-- CCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCCGATCATCT-CAAAA-
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> CCATTTCATCTCCGCCTCCTGAAAACCCT-GCTCCGATCATCTACAAAA-
ET0028034      --> CCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCCGATCATCT-CAAAA-
CT0055129      --> CCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCCGATCATCT-CAAAAA
CT0062408      --> CCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCCGATCATCT-CAAAA-
CT0115868      --> ..................................................
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               1001   -   1051
RU01952        --> CCCAAAACCCTAGCTCGGACGACAAAGCGCAAGACCTCGGAAA-GAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................  Control
ET0042435      <-- ..................................................  Ethylene
CT0130714      <-- ..................................................  Control
CT0131104      <-- ..................................................  Control
ET0115371      <-- CCCAAAACCCTAGCTCGGACGACAAAGCGCAAGACCTCGGAAA-GAGGTG  Ethylene
ET0121236      <-- CCCAAAACCCTAGCTCGGACGACAAAGCGCAAGACCTCGGAAA-GAGGTG  Ethylene
ET0121958      <-- CCCAAAACCCTAGCTCGGACGACAAAGCGCAAGACCTCGGAAA-GAGGTG  Ethylene
ET0122630      <-- CCCAAAACCCTAGCTCGGACGACAAAGCGCAAGACCTCGGAAA-GAGGTG  Ethylene
CT0063699      <-- ..................................................  Control
ET0048638      <-- ..................................................  Ethylene
ET0059321      <-- ..................................................  Ethylene
CT0068383      --> ..................................................  Control
CT0097881      --> ..................................................  Control
CT0135910      --> ..................................................  Control
CT0002843      --> ..................................................  Control
CT0061253      --> ..................................................  Control
CT0001567      --> ..................................................  Control
ET0007486      --> CCCAAA-CCCT-GCTCGGACGAC...........................  Ethylene
ET0028034      --> CCCAAAACCCTAGCTCGGACGACAAAGCG.....................  Ethylene
CT0055129      --> CCCAAAACCCTAGCTCGAACGACAAAGCGCAAGACCTCGGAAAAGAGGTG  Control
CT0062408      --> CCCAAAACCCTAGCTCGAACGACAAAGCGCAAGACCTCGGAAA-GAGGTG  Control
CT0115868      --> ..................................................  Control
ET0082007      --> ..................................................  Ethylene
ET0128086      --> ..................................................  Ethylene

               1051   -   1101
RU01952        --> GCCGAGGGACGAAGTCTTGGCTCTGATCAACCTCCGGTGCAGTCTCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- GCCGAGGGACGAAGTCTTGGCTCTGA........................
ET0121236      <-- GCCGAGGGACGAAGTCTTGGCTCTGA........................
ET0121958      <-- GCCGAGGGACGAAGTCTTGGCTCTGAa.......................
ET0122630      <-- GCCGAGGGACGAAGTCTTGGCTCTGA........................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> GCCGAGGGACGAAGTCTTGGCTCTGATCAACCTCCGGTGCAGTCTCTTCA
CT0062408      --> GCCGAGGGACGAAGTCTTGGCTCTGATCAACCTCCGGTGCAGTCTCTTCA
CT0115868      --> ...............................CTCCGGTGCAGTCTCTTCA
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               1101   -   1151
RU01952        --> ACAATGGCGATCAACAAGACAAGGATAAAGATGGAGGAGCCGTCAAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ACAATGGCGATCAA....................................
CT0062408      --> ACAATGGC..........................................
CT0115868      --> ACAATGGCGATCAACAAGACAAGGATAAAGATGGAGGAGCCGTCAAGGCT
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               1151   -   1201
RU01952        --> CCACTGTGGGAGAGAATCTCACAAGGGATGTCAGAGTTGGGTTACAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> CCACTGTGGGAGAGAATCTCACAAGGGATGTCAGAGTTGGGTTACAAGAG
ET0082007      --> ..................................................
ET0128086      --> ..................................................

               1201   -   1251
RU01952        --> AAACGCCAAGAGGTGTAAAGAGAAATGGGAGAATATCAATAAGTACTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- .........................TGGGAGAATATCAATAAGTACTTTA
ET0048638      <-- ..................................................
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> AAACGCCAAGAGGTGTAAAGAGAAATGGGAGAATATCAATAAGTACTTTA
ET0082007      --> ...CGCCAAGAGGTGTAAAGAGAAATGGGAGAATATCAATAAGTACTTTA
ET0128086      --> ..................................................

               1251   -   1301
RU01952        --> GGAAAACAAAGGATGTGAACAAGAAGAGGTCGCTTGACTCGAGGACTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- GGAAAACAAAGGATGTGAACAAGAAGAGGTCGCTTGACTCGAGGACTTGC
ET0048638      <-- ............................................ACTTGC
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> GGAAAACAAAGGATGTGAACAAGAAGAGGTCGCTTGACTCGAGGACTTGC
ET0082007      --> GGAAAACAAAGGATGTGAACAAGAAGAGGTCGCTTGACTCGAGGACTTGC
ET0128086      --> ..................................................

               1301   -   1351
RU01952        --> CCTTATTTTCATCAACTAAGCACTTTGTACAACCAAGGCATACTCGTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- CCT-ATTTTCATCAACTAAGCACTTTGTACAACCAAGGCATACTCGTACC
ET0059321      <-- ..................................................
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> CCTTATTTTCATCAACTAAGCACTTTGTAC....................
ET0082007      --> CCTTATTTTCATCAACTAAGCACTTTGTACAACCAAGGCATACTCGTACC
ET0128086      --> ..........................................CTCGTACC

               1351   -   1401
RU01952        --> GCCTTCCGATCACCAAGCGGCGGCGCCGGAAAACCGCTCACCGGAGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- GCCTTCCGATCACCAAGCGGCGGCGCCCGAAAACCGCTCACCGGAGAACC
ET0059321      <-- ....................CGGCGCCGGAAAACCGCTCACCGGAGAACC
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> GCCTTCCGATCACCAAGCGGCGGCGCCGGAAAACCGCTCACCGGAGAACC
ET0128086      --> GCCTTCCGATCACCAAGCGGCGGCGCCCGAAAACCGCTCACCGGAGAACC

               1401   -   1451
RU01952        --> AATCGTCTCTAGCTGAAGGTGAGAAAAACAATATGGTACTGCAAGCTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- AATCATCTCTAGCTGAAGGTGAGAAAAACAATATGGTACTGCAAGCTGTA
ET0059321      <-- AATCGTCTCTAGCTGAAGGTGAGAAAAACAATATGGTACAGCAAGCTGTA
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> AATCGTCTCTAGCTGAAGGTGAGAAAAACAATATGGTACAGCAAGCTGTA
ET0128086      --> AATCATCTCTAGCTGAAGGTGAGAAAAACAATATGGTACTGCAAGCTGTA

               1451   -   1501
RU01952        --> CCGGCAGCTTTTGATTTTGAATTCTGATGTTTTGCATATTTGTGTGTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..................................................
ET0042435      <-- ..................................................
CT0130714      <-- ..................................................
CT0131104      <-- ..................................................
ET0115371      <-- ..................................................
ET0121236      <-- ..................................................
ET0121958      <-- ..................................................
ET0122630      <-- ..................................................
CT0063699      <-- ..................................................
ET0048638      <-- CCGGCAGCTTTTGATTTTGAATTCTGATGTTTTGCATATTTGTGTGTGCA
ET0059321      <-- CCGGCAGCTTTTGATTTTGAATTCTGATGTTTTGCATATTTGTGTGTGCA
CT0068383      --> ..................................................
CT0097881      --> ..................................................
CT0135910      --> ..................................................
CT0002843      --> ..................................................
CT0061253      --> ..................................................
CT0001567      --> ..................................................
ET0007486      --> ..................................................
ET0028034      --> ..................................................
CT0055129      --> ..................................................
CT0062408      --> ..................................................
CT0115868      --> ..................................................
ET0082007      --> CCGGCAGCTTTTGA....................................
ET0128086      --> CCGGCAGCTTTTGATTTTGAATTCTGATGTTTTGCATATTTGTGTGTGCA

               1501   -   1551
RU01952        --> ATATTTTCAGTGATAATAATATGTGATACCTTTTTCTTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0117090      <-- ..........................................
ET0042435      <-- ..........................................
CT0130714      <-- ..........................................
CT0131104      <-- ..........................................
ET0115371      <-- ..........................................
ET0121236      <-- ..........................................
ET0121958      <-- ..........................................
ET0122630      <-- ..........................................
CT0063699      <-- ..........................................
ET0048638      <-- ATATTTTCAGTGATAATAATATGTGATACCTTTTTCTTTTTA
ET0059321      <-- ..........................................
CT0068383      --> ..........................................
CT0097881      --> ..........................................
CT0135910      --> ..........................................
CT0002843      --> ..........................................
CT0061253      --> ..........................................
CT0001567      --> ..........................................
ET0007486      --> ..........................................
ET0028034      --> ..........................................
CT0055129      --> ..........................................
CT0062408      --> ..........................................
CT0115868      --> ..........................................
ET0082007      --> ..........................................
ET0128086      --> ATATTTTCAGTGATAATAATATGTGATACC............