SNPs of unigene RU02098
               1      -     51
RU02098        --> TTTTTTTTAAAGAGAAGTTGAACAGAACTACATTATTATAACAAATACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- .................TTGAACAGAACTACATTATTATAACAAATACAG
CT0109927      <-- .................................ttTTATAACAAATACAG
CT0042028      <-- .....................................ATAACAAATACAG
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> TTTTTTTTAAAGAGAAGTTGAACAGAACTACATTATTATAACAAATACAG
CT0019386      --> ...................GAACAGAACTACATTATTATAACAAATACAG
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               51     -    101
RU02098        --> CTACATTAGCTATTATAATAGCCCCATATTTTACAAACCAAGAACACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- CTACATTAGCTATTATAATAGCCCCATATTTTACAAACCAAGAACACAAT
CT0109927      <-- CTACATTAGCTATTATAATAGCCCCATATTTTACAAACCAAGAACACAAT
CT0042028      <-- CTACATTAGCTATTATAATAGCCCCATATTTTACAAACCAAGAAC.....
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> CTACATTAGCTATTATAATAGCCCCATATTTTACAAACCAAGAACACAAT
CT0019386      --> CTACATTAGCTATTATAATAGCCCCATATTTTACAAACCAAGAACACAAT
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               101    -    151
RU02098        --> ACCACAAACTTTGTTTTTTGCACATTAAATTATTCCTTAACACCATCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ACCACAAACTTTGTTTTTTGCACATTAAATTATTCCTTAACACCATCTAA
CT0109927      <-- ACCACAAACTTTGTTTTTTGCACATTAAATTATTCCTTAACACCATCTAA
CT0042028      <-- ..................................................
ET0011975      <-- ..................gtCACATTAAATTATTCCTTAACACCATCTAA
ET0071717      <-- ...........................AATTATTCCTTAACACCATCTAA
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ACCACAAACTTTGTTTTTTGCACATTAAATTATTCCTTAACACCATCTAA
CT0019386      --> ACCACAAACTTTGTTTTTTGCACATTAAATTATTCCTTAACA........
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               151    -    201
RU02098        --> TTAACAGTGAGATTCCTCCCACCATAGACTAATTAAGCTGAAATCAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- TTAACAGTGAGATTCCTCCCACCATAGACTAATTAAGCTGAAATCAAAgt
CT0109927      <-- TTAACAGTGAGATTCCTCCCACCATAGACTAATTAAGCTGAAATCAAAAG
CT0042028      <-- ..................................................
ET0011975      <-- TTAACAGTGAGATTCCTCCCACCATAGACTAATTAAGCTGAAATCAAAAG
ET0071717      <-- TTAACAGTGAGATTCCTCCCACCATAGACTAATTAAGCTGAAATCAAAAG
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> TTAACAGTGAGATTCCTCCCACCATAGACTAATTAAGCTGAAATCAAAAG
CT0019386      --> ..................................................
CT0010044      --> .....................CCATAGACTAATTAAGCTGAAATCAAAAG
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               201    -    251
RU02098        --> TACACCTCTCTGGCTCTCTCTCTGTGTCCCTCTTTCTTAATCCAGAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- TAC...............................................
CT0042028      <-- ..................................................
ET0011975      <-- TACACCTCTCTGGCTCTCTCTCTGTtaattattccttaacaccatct...
ET0071717      <-- TACACCTCTCTGGCTCTCTCTCTGTGTCCCTCTTTCTTAATCCAGAATCC
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> TACACCTCTCTGGCTCTCTCTCTGTGTCCCTCTTTCTTAATCCAGAATCC
CT0019386      --> ..................................................
CT0010044      --> TACACCTCTCTGGCTCTCTCTCTGTGTCCCTCTTTCTTAATCCAGAATCC
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               251    -    301
RU02098        --> AAAGAATTAATCCCCTGGAGATCAGTACTGAAACATCTCTGCAGAAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- AAAGAATTAATCCCCTGGAGATCAGTACTGAAACATCTCTGCAGAAGCCA
ET0020477      <-- ...........ccctcGGAGATCAGTACTGAAACATCTCTGCAGAAGCCA
RH09E163       <-- ..........................ACTGATACATCTGTGCAGAAGCCA
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> AAA...............................................
CT0019386      --> ..................................................
CT0010044      --> AAAGAATTAATCCCCTGGAGATCAGTACTGAAACATCTCTGCAGAAGCCA
RH11H94        --> ..........................ACTGAAACATCTCTGCAGAAGCCA
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               301    -    351
RU02098        --> TGATGGGATGGTTCAGATATGAAAGATTCAAAGGGTTGAAGAAGCAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- TGATGGGATGGTTCAGATATGAAAGATTCAAAGGGTTGAAGAAGCA....
ET0020477      <-- TGATGGGATGGTTCAGATATGAAAGATTCAAAGGGTTGAAGAAGCAATCA
RH09E163       <-- TGATGGGATGGTTCAGATATGAAAGATTCAAAGGGTTGAAGAAGCAATCA
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> TGATGGGATGGTTCAGATATGAAAGATTCAAAGGGTTGAAGAAGCAATCA
RH11H94        --> TGATGGGATGGTTCAGATATGAAAGATTCAAAGGGTTGAAGAAGCAATCA
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               351    -    401
RU02098        --> GCACTAGGCTCAGTGAAGTTGTTGTTGCTTGAATCCTCAACAAAAC-ACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- GCACTAGGCTCAGTGAAGTTGTTGTTGCTTGAATCCTCAACAAAACCACC
RH09E163       <-- GCACTAGGCTCAGTGAAGTTGTTGTTGCTTGAATCCTCAACAAAACCACC
CT0039450      <-- ............GTGAAGTTGTTGTTGCTTGAATCCTCAACAAAAC-ACC
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> GCACTAGGCTCAGTGAAGTTGTTGTTGCTTGA..................
RH11H94        --> GCACTAGGCTCAGTGAAGTTGTTGTTGCTTGAATCCTCAACAAAACCACC
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               401    -    451
RU02098        --> ATGGTTTGCATTCAA-AAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ATGGTTTGCATTCAAGAAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
RH09E163       <-- ATGGTTTGCATTCAAGAAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0039450      <-- ATGGTTTGCATTCAAGAAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0042588      <-- ...tttgtCATTCAAGAAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0123822      <-- ..............A-AAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0123979      <-- ..............A-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0124072      <-- ............gtA-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0124263      <-- ..............A-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0124894      <-- ...........cgtA-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0124951      <-- ............gtA-AAAGACGATGATCTC-ATTCTAGAGACTGCAGCC
CT0125239      <-- ..............A-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0125266      <-- .............gA-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0125367      <-- ..............A-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0125667      <-- ............gtA-AAAGACGATGATCTC-ATTCTAGAGACTGCAGCC
CT0125961      <-- ............cgA-AAAG-CGATGATCTCCATTC-AGAGACTGCAGCC
CT0126213      <-- .............gA-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126228      <-- .............gA-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126494      <-- .............gA-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126688      <-- ..............A-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126731      <-- .............gA-AAAGACGATGATCTC-ATTC-AGAGACTGCAGCC
CT0100112      <-- ..............agAAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0124934      <-- ................AAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0125549      <-- ................AAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0115755      <-- ................aaagaCGATGATCTC-ATTC-AGAGACTGCAGCC
CT0123780      <-- ................aaagaCGATGATCTC-ATTC-AGAGACTGCAGCC
CT0123977      <-- ................aaagaCGATGATCTC-ATTC-AGAGACTGCAGCC
CT0125540      <-- ................aaagaCGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126290      <-- ................aaagaCGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126315      <-- ................aaagaCGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126488      <-- ................aaagaCGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126509      <-- ................aaagaCGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126607      <-- ................aaagaCGATGATCTC-ATTC-AGAGACTGCAGCC
CT0126727      <-- ................aaagaCGATGATCTCCATTC-AGAGACTGCAGCC
CT0126735      <-- .....................CGATGATCTC-ATTC-AGAGACTGCAGCC
ET0113853      <-- .....................................AGAGACTGCAGCC
ET0114476      <-- .....................................AGAGACTGCAGCC
ET0114616      <-- .....................................AGAGACTGCAGCC
ET0115408      <-- .....................................AGAGACTGCAGCC
ET0115876      <-- .....................................AGAGACTGCAGCC
ET0116379      <-- .....................................AGAGACTGCAGCC
ET0117160      <-- .....................................AGAGACTGCAGCC
ET0117220      <-- .....................................AGAGACTGCAGCC
ET0118824      <-- .....................................AGAGACTGCAGCC
ET0120041      <-- .....................................AGAGACTGCAGCC
ET0120174      <-- .....................................AGAGACTGCAGCC
ET0120592      <-- .....................................AGAGACTGCAGCC
ET0121307      <-- .....................................AGAGACTGCAGCC
ET0123232      <-- .....................................AGAGACTGCAGCC
ET0124378      <-- .....................................AGAGACTGCAGCC
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ATGGTTTGCATTCAAGAAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0054432      --> .TGGTTTGCATTCAAGAAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
ET0055999      --> .....TTGCATTCAAGAAAG-CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0027269      --> .....................CGATGATCTC-ATTC-AGAGACTGCAGCC
CT0080581      --> ...................................C-AGAGACTGCAGCC
CT0072686      --> ....................cgatgagctcgattacgAGAGACTGCAGCC
CT0004190      --> ...........................................TGCAGCC
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               451    -    501
RU02098        --> T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- T-GTTGCTGAGCTCAGACACTTGGGC........................
RH09E163       <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0039450      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0042588      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0123822      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0123979      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0124072      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0124263      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0124894      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0124951      <-- T-GTTGCTGAGCTCAGACACTTGGGCGTCTGAGCACAGAGTTCTCAGCCT
CT0125239      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0125266      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0125367      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0125667      <-- T-GTTGCTGAGCTCAGACACTTGGGCGTCTGAGCACAGAGTTCTCAGCCT
CT0125961      <-- TCGTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126213      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126228      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126494      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126688      <-- T-GTTGCTGAGCTCAGACACTTGGGCGTCTGAGCACAGAGTTCTCAGCCT
CT0126731      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0100112      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0124934      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0125549      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0115755      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0123780      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0123977      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0125540      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126290      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126315      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126488      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126509      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126607      <-- TCGTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126727      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0126735      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0113853      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0114476      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0114616      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0115408      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0115876      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0116379      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0117160      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0117220      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0118824      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0120041      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0120174      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0120592      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0121307      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0123232      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0124378      <-- T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0081809      <-- ...........CTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0047371      <-- .................................CACAGAGTTCTCAGCCT
CT0114616      <-- ............................................CAGCCT
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0054432      --> T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0055999      --> T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0027269      --> T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0080581      --> T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0072686      --> T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
CT0004190      --> T-GTTGCTGAGCTCAGACACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0124961      --> ..................ACTTGGGC-TCTGAGCACAGAGTTCTCAGCCT
ET0029928      --> .................................CACAGAGTTCTCAGCCT
CT0050525      --> ..................................ACAGAGTTCTCAGCCT
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               501    -    551
RU02098        --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- CAATGTTTATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0039450      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0042588      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTT...................
CT0123822      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0123979      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0124072      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0124263      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0124894      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0124951      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0125239      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0125266      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0125367      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0125667      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0125961      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126213      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126228      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126494      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126688      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126731      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0100112      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0124934      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0125549      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0115755      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0123780      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0123977      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0125540      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126290      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126315      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126488      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126509      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126607      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126727      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0126735      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0113853      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0114476      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0114616      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0115408      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0115876      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0116379      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0117160      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0117220      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0118824      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0120041      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0120174      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0120592      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0121307      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0123232      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0124378      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0081809      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0047371      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0114616      <-- CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0054432      --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0055999      --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0027269      --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0080581      --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0072686      --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAG................
CT0004190      --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0124961      --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0029928      --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
CT0050525      --> CAATGTTCATGTAATGCTGGCTTGTGATGTTGAGGCTGCTGATGATCTGG
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               551    -    601
RU02098        --> TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0039450      <-- TGGTTCTCCTTCCTCA..................................
CT0042588      <-- ..................................................
CT0123822      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0123979      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0124072      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0124263      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0124894      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0124951      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0125239      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0125266      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0125367      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0125667      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0125961      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126213      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126228      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126494      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126688      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126731      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0100112      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCA....
CT0124934      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0125549      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0115755      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAG..
CT0123780      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0123977      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0125540      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126290      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126315      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126488      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126509      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126607      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126727      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0126735      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0113853      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0114476      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0114616      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0115408      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0115876      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0116379      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0117160      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0117220      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0118824      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0120041      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0120174      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0120592      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0121307      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0123232      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0124378      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0081809      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0047371      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0114616      <-- TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0015297      <-- ...........CCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0116773      <-- ...................................CAGATCATCCAAGTG
CT0117747      <-- ...................................CAGATCATCCAAGTG
CT0114813      <-- .....................................GATCATCCAAGTG
CT0117393      <-- .....................................GATCATCCAAGTG
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0054432      --> TGGT..............................................
ET0055999      --> TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGT.
CT0027269      --> TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0080581      --> TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0072686      --> ..................................................
CT0004190      --> TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0124961      --> TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0029928      --> TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
CT0050525      --> TGGTTCTCCTTCCTCAGCTGAGCCATCTGCGCCGTCAGATCATCCAAGTG
ET0145383      --> ........................ATCTGCGCCGTCAGATCATCCAAGTG
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               601    -    651
RU02098        --> CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- CTTCTGTTT-CCT-C...................................
CT0123979      <-- CTTCTGTTT-CCT-C...................................
CT0124072      <-- CTTCTGTTT-CCT-C...................................
CT0124263      <-- CTTCTGTTT-CCT-C...................................
CT0124894      <-- CTTCTGTTT-CCT-C...................................
CT0124951      <-- CTTCTGTTT-CCT-C...................................
CT0125239      <-- CTTCTGTTTtcctc....................................
CT0125266      <-- CTTCTGTTT-CCT-C...................................
CT0125367      <-- CTTCTGTTT-CCT-C...................................
CT0125667      <-- CTTCTGTTT-CCT-C...................................
CT0125961      <-- CTTCTGTTT-CCT-C...................................
CT0126213      <-- CTTCTGTTT-CCT-C...................................
CT0126228      <-- CTTCTGTTT-CCT-C...................................
CT0126494      <-- CTTCTGTTT-CCT-C...................................
CT0126688      <-- CTTCTGTTT-CCT-C...................................
CT0126731      <-- CTTCTGTTT-CCT-C...................................
CT0100112      <-- ..................................................
CT0124934      <-- CTTCTGTTTtcctc....................................
CT0125549      <-- CTTCTGTTTtcctc....................................
CT0115755      <-- ..................................................
CT0123780      <-- CTTCTGTTT-CCT-C...................................
CT0123977      <-- CTTCTGTTT-CCT-C...................................
CT0125540      <-- CTTCTGTTT-CCTac...................................
CT0126290      <-- CTTtcttgttttccttc.................................
CT0126315      <-- CTTCTGTTTtcctc....................................
CT0126488      <-- CTTCTGTTT-CCT-C...................................
CT0126509      <-- CTTCTGTTTtcctc....................................
CT0126607      <-- CTTCTGTTT-CCT-C...................................
CT0126727      <-- CTTCTGTTT-CCT-C...................................
CT0126735      <-- CTTtcttgttttcctc..................................
ET0113853      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0114476      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0114616      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0115408      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0115876      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0116379      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0117160      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0117220      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0118824      <-- CTTCTGTTT-CCT-CATCCTAagaaccttacttagac.............
ET0120041      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0120174      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0120592      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0121307      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0123232      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0124378      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGC..................
ET0081809      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
CT0047371      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
CT0114616      <-- CTTCTGTTT-CCT-CATCCTAGACCTTC......................
ET0015297      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
CT0116773      <-- CTTCTGTTT-CCTTCATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
CT0117747      <-- CTTCTGTTT-CCTTCATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
CT0114813      <-- CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
CT0117393      <-- CTTCTGTTTTCCT-CATCCTAGAC-TTCTTGCAGATTCACGATTCGACAA
ET0065252      <-- ................TCCTAGACCTTCTTGCAGATTCACGATTCGACAA
ET0092339      <-- ................TCCTAGACCTTCTTGCAGATTCACGATTCGACAA
ET0080006      <-- .................CCTAGACCTTCTTGCAGATTCACGATTCGACAA
ET0063488      <-- ......................ACCTTCTTGCAGATTCACGATTCGACAA
ET0088367      <-- ......................ACCTTCTTGCAGATTCACGATTCGACAA
CT0117845      <-- ...........................CTTGCAGATTCACGATTCGACAA
CT0117557      <-- ...............................CAGATTCACGATTCGACAA
CT0115705      <-- ...............................................CAA
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> CTTCTGTTT-CCT-CATta...............................
CT0080581      --> CTTCT.............................................
CT0072686      --> ..................................................
CT0004190      --> CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGta.......
ET0124961      --> CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
ET0029928      --> CTTCTGTTT-CCT-CAT.................................
CT0050525      --> CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
ET0145383      --> CTTCTGTTT-CCT-CATCCTAGACCTTCTTGCAGATTCACGATTCGACAA
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               651    -    701
RU02098        --> CATTCTCTTTCTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- CATTCTCTTTCTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- CATTCTCTT.........................................
CT0047371      <-- CATTCTCTTTCTTTTTCT-CTGATCCATCAG...................
CT0114616      <-- ..................................................
ET0015297      <-- CATT..............................................
CT0116773      <-- CATTCTCTTTCTTTTTCTTCTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0117747      <-- CATTCTCTTTCTTTTTCTTCTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0114813      <-- CATTCTCTTTCTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0117393      <-- CATTCTCTTTCTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
ET0065252      <-- CATTCTCTTTCTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
ET0092339      <-- CATTCTCTT-CTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
ET0080006      <-- CATTCTCTTTCTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
ET0063488      <-- CATTCTCTT-CTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
ET0088367      <-- CATTCTCTTTCTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0117845      <-- CATTCTCTT-CTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0117557      <-- CATTCTCTT-CTTTTTCTTCTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0115705      <-- CATTCTCTT-CTTTTTCTTCTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0056362      <-- .............TTTTT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0115525      <-- ...................CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> CATTCTCTTTCTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> CATTCTCTTTtc......................................
ET0029928      --> ..................................................
CT0050525      --> CATTCTCTTTCTT.....................................
ET0145383      --> CATTCTCTTTCTTTTTCT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0118162      --> ................CT-CTGATCCATCAGAGCCTGCAAGTCTTCTTCA
CT0001496      --> ....................TGATCCATCAGAGCCTGCAAGTCTTCTTCA
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               701    -    751
RU02098        --> GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0117747      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0114813      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0117393      <-- GAGCCAGAGTTTTTGAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
ET0065252      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
ET0092339      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
ET0080006      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
ET0063488      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
ET0088367      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0117845      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0117557      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0115705      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0056362      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCAC......
CT0115525      <-- GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0118162      --> GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0001496      --> GAGCCAGAGTTTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
ET0005658      --> ..........TTT-GAATCATGGAGGAAACAGAGGATGTTCCACTAGAAG
CT0067264      --> ......................GAGGAAACAGAGGATGTTCCACTAGAAG
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               751    -    801
RU02098        --> AAGCCATTGGAAA-CCC-A-G-AAACTTTTTTGCAGATTTCGACAGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................  Control
CT0109927      <-- ..................................................  Control
CT0042028      <-- ..................................................  Control
ET0011975      <-- ..................................................  Ethylene
ET0071717      <-- ..................................................  Ethylene
ET0020477      <-- ..................................................  Ethylene
RH09E163       <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTTTTGCAGATTTCGACAGTAAT  WaterDS
CT0039450      <-- ..................................................  Control
CT0042588      <-- ..................................................  Control
CT0123822      <-- ..................................................  Control
CT0123979      <-- ..................................................  Control
CT0124072      <-- ..................................................  Control
CT0124263      <-- ..................................................  Control
CT0124894      <-- ..................................................  Control
CT0124951      <-- ..................................................  Control
CT0125239      <-- ..................................................  Control
CT0125266      <-- ..................................................  Control
CT0125367      <-- ..................................................  Control
CT0125667      <-- ..................................................  Control
CT0125961      <-- ..................................................  Control
CT0126213      <-- ..................................................  Control
CT0126228      <-- ..................................................  Control
CT0126494      <-- ..................................................  Control
CT0126688      <-- ..................................................  Control
CT0126731      <-- ..................................................  Control
CT0100112      <-- ..................................................  Control
CT0124934      <-- ..................................................  Control
CT0125549      <-- ..................................................  Control
CT0115755      <-- ..................................................  Control
CT0123780      <-- ..................................................  Control
CT0123977      <-- ..................................................  Control
CT0125540      <-- ..................................................  Control
CT0126290      <-- ..................................................  Control
CT0126315      <-- ..................................................  Control
CT0126488      <-- ..................................................  Control
CT0126509      <-- ..................................................  Control
CT0126607      <-- ..................................................  Control
CT0126727      <-- ..................................................  Control
CT0126735      <-- ..................................................  Control
ET0113853      <-- ..................................................  Ethylene
ET0114476      <-- ..................................................  Ethylene
ET0114616      <-- ..................................................  Ethylene
ET0115408      <-- ..................................................  Ethylene
ET0115876      <-- ..................................................  Ethylene
ET0116379      <-- ..................................................  Ethylene
ET0117160      <-- ..................................................  Ethylene
ET0117220      <-- ..................................................  Ethylene
ET0118824      <-- ..................................................  Ethylene
ET0120041      <-- ..................................................  Ethylene
ET0120174      <-- ..................................................  Ethylene
ET0120592      <-- ..................................................  Ethylene
ET0121307      <-- ..................................................  Ethylene
ET0123232      <-- ..................................................  Ethylene
ET0124378      <-- ..................................................  Ethylene
ET0081809      <-- ..................................................  Ethylene
CT0047371      <-- ..................................................  Control
CT0114616      <-- ..................................................  Control
ET0015297      <-- ..................................................  Ethylene
CT0116773      <-- AAGCCATTGGAAA-CCC-AAGAAAACTTTTTa..................  Control
CT0117747      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTTTT..................  Control
CT0114813      <-- AAGCCATTGGAAAACCCAA-GAAAACTTTTTTa.................  Control
CT0117393      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTTT...................  Control
ET0065252      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Ethylene
ET0092339      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Ethylene
ET0080006      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Ethylene
ET0063488      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Ethylene
ET0088367      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Ethylene
CT0117845      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTTTT..................  Control
CT0117557      <-- AAGCCATTGGAAAACCCAA-GAAAACTTTTTa..................  Control
CT0115705      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTTT...................  Control
CT0056362      <-- ..................................................  Control
CT0115525      <-- AAGCCATTGGAAA-CCC-A-G-AAACTTTTTTa.................  Control
CT0076544      <-- ..................................................  Control
CT0139123      <-- ..................................................  Control
ET0065142      <-- ..................................................  Ethylene
ET0113542      <-- ..................................................  Ethylene
ET0026942      <-- ..................................................  Ethylene
CT0037611      <-- ..................................................  Control
ET0074351      --> ..................................................  Ethylene
CT0019386      --> ..................................................  Control
CT0010044      --> ..................................................  Control
RH11H94        --> AAGCCATTGGAAA-CCC-A-G-AAACTTTTTTGCAGATTTCGACAGTAAT  WaterDS
CT0054432      --> ..................................................  Control
ET0055999      --> ..................................................  Ethylene
CT0027269      --> ..................................................  Control
CT0080581      --> ..................................................  Control
CT0072686      --> ..................................................  Control
CT0004190      --> ..................................................  Control
ET0124961      --> ..................................................  Ethylene
ET0029928      --> ..................................................  Ethylene
CT0050525      --> ..................................................  Control
ET0145383      --> AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Ethylene
CT0118162      --> AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Control
CT0001496      --> AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Control
ET0005658      --> AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Ethylene
CT0067264      --> AAGCCATTGGAAA-CCC-A-G-AAACTTTATTGCAGATTTCGACAGTAAT  Control
ET0008454      --> ..........................TTTATTGCAGATTTCGACAGTAAT  Ethylene
ET0147580      --> ..................................................  Ethylene
ET0015949      --> ..................................................  Ethylene
ET0145970      --> ..................................................  Ethylene

               801    -    851
RU02098        --> TAAGAGTAACTC-AGACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................  Control
CT0109927      <-- ..................................................  Control
CT0042028      <-- ..................................................  Control
ET0011975      <-- ..................................................  Ethylene
ET0071717      <-- ..................................................  Ethylene
ET0020477      <-- ..................................................  Ethylene
RH09E163       <-- TAAGAGTAACTC-AGACAGATAATTAGGTAAAAA-C..............  WaterDS
CT0039450      <-- ..................................................  Control
CT0042588      <-- ..................................................  Control
CT0123822      <-- ..................................................  Control
CT0123979      <-- ..................................................  Control
CT0124072      <-- ..................................................  Control
CT0124263      <-- ..................................................  Control
CT0124894      <-- ..................................................  Control
CT0124951      <-- ..................................................  Control
CT0125239      <-- ..................................................  Control
CT0125266      <-- ..................................................  Control
CT0125367      <-- ..................................................  Control
CT0125667      <-- ..................................................  Control
CT0125961      <-- ..................................................  Control
CT0126213      <-- ..................................................  Control
CT0126228      <-- ..................................................  Control
CT0126494      <-- ..................................................  Control
CT0126688      <-- ..................................................  Control
CT0126731      <-- ..................................................  Control
CT0100112      <-- ..................................................  Control
CT0124934      <-- ..................................................  Control
CT0125549      <-- ..................................................  Control
CT0115755      <-- ..................................................  Control
CT0123780      <-- ..................................................  Control
CT0123977      <-- ..................................................  Control
CT0125540      <-- ..................................................  Control
CT0126290      <-- ..................................................  Control
CT0126315      <-- ..................................................  Control
CT0126488      <-- ..................................................  Control
CT0126509      <-- ..................................................  Control
CT0126607      <-- ..................................................  Control
CT0126727      <-- ..................................................  Control
CT0126735      <-- ..................................................  Control
ET0113853      <-- ..................................................  Ethylene
ET0114476      <-- ..................................................  Ethylene
ET0114616      <-- ..................................................  Ethylene
ET0115408      <-- ..................................................  Ethylene
ET0115876      <-- ..................................................  Ethylene
ET0116379      <-- ..................................................  Ethylene
ET0117160      <-- ..................................................  Ethylene
ET0117220      <-- ..................................................  Ethylene
ET0118824      <-- ..................................................  Ethylene
ET0120041      <-- ..................................................  Ethylene
ET0120174      <-- ..................................................  Ethylene
ET0120592      <-- ..................................................  Ethylene
ET0121307      <-- ..................................................  Ethylene
ET0123232      <-- ..................................................  Ethylene
ET0124378      <-- ..................................................  Ethylene
ET0081809      <-- ..................................................  Ethylene
CT0047371      <-- ..................................................  Control
CT0114616      <-- ..................................................  Control
ET0015297      <-- ..................................................  Ethylene
CT0116773      <-- ..................................................  Control
CT0117747      <-- ..................................................  Control
CT0114813      <-- ..................................................  Control
CT0117393      <-- ..................................................  Control
ET0065252      <-- TAAGAGCAACTCTAGACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA  Ethylene
ET0092339      <-- TAAGAGCAACTCTAGACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA  Ethylene
ET0080006      <-- TAAGAGCAACTCTAGACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA  Ethylene
ET0063488      <-- TAAGAGCAACTCTAGACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA  Ethylene
ET0088367      <-- TAAGAGCAACTCTAGACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA  Ethylene
CT0117845      <-- ..................................................  Control
CT0117557      <-- ..................................................  Control
CT0115705      <-- ..................................................  Control
CT0056362      <-- ..................................................  Control
CT0115525      <-- ..................................................  Control
CT0076544      <-- ..................................................  Control
CT0139123      <-- ..................................................  Control
ET0065142      <-- ..................................................  Ethylene
ET0113542      <-- ..................................................  Ethylene
ET0026942      <-- ..................................................  Ethylene
CT0037611      <-- ..................................................  Control
ET0074351      --> ..................................................  Ethylene
CT0019386      --> ..................................................  Control
CT0010044      --> ..................................................  Control
RH11H94        --> TAAGAGTAACTC-AGACAGATAATTAGGTAAAAA-CAGt...........  WaterDS
CT0054432      --> ..................................................  Control
ET0055999      --> ..................................................  Ethylene
CT0027269      --> ..................................................  Control
CT0080581      --> ..................................................  Control
CT0072686      --> ..................................................  Control
CT0004190      --> ..................................................  Control
ET0124961      --> ..................................................  Ethylene
ET0029928      --> ..................................................  Ethylene
CT0050525      --> ..................................................  Control
ET0145383      --> TAAGAGCAACTCTAGACAGATAATTAGGTAAAAAACAGGACCCAGATGCA  Ethylene
CT0118162      --> TAAGAGCAACT.......................................  Control
CT0001496      --> TAAGAGCAACTCTAGACAG...............................  Control
ET0005658      --> TAAGAGCAACTCTAGACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA  Ethylene
CT0067264      --> TAAGAGCAACTCTAGACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA  Control
ET0008454      --> TAAGAGCAACTCTAGACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA  Ethylene
ET0147580      --> ..............GACAGATAATTAGGTAAAAA-CAGGACCCAGATGCA  Ethylene
ET0015949      --> ..................................................  Ethylene
ET0145970      --> ..................................................  Ethylene

               851    -    901
RU02098        --> GCATAAACTTAAATATTGCAGATAAAATAGTAAATAATAGCTATAATATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- GCATAAACTTAAAT....................................
ET0092339      <-- GC................................................
ET0080006      <-- GCATAAACTTAAAat...................................
ET0063488      <-- GCATAAACTTAAAT....................................
ET0088367      <-- GCATAAACTTAAAT....................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ................TGCAGATAAAATAGTAAATAATAGCTATAATATA
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> GCATAAACTTAAATATTGCAGATAAAATAGTAAA................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> GCATAAACTTAAATATTGCAGATAAAATAGTAAATAATAGCTATAATATA
CT0067264      --> GCATAAACTTAAATATTGCAGATAAAATAGTAAATAATAGCTATAATATA
ET0008454      --> GCATAAACTTAAATATTGCAGATAAAATAGTAAATAATAGCTATAATATA
ET0147580      --> GCATAAACTTAAATATTGCAGATAAAATAGTAAATAATAGCTATAATATA
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               901    -    951
RU02098        --> GGTTGTTTGGGGCCTATTATCAGAGTTTGGGACCTATGAAACGTAGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- GGTTGTTTGGGGCCTATTATCAGAGTTTGGGACCTATGAAACGTAGTAAA
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> GGTTGTTTGGGGCCTATTATCAGAGTTTGGGACCTATGAAACGTAGTAAA
CT0067264      --> GGTTGTTTGGGGCCTATTATCAGAGTTTGGGACCTATGAAACGTAGTAAA
ET0008454      --> GGTTGTTTGGGGCCTATTATCAGAGTT.......................
ET0147580      --> GGTTGTTTGGGGCCTATTATCAGAGTTTGGGACCTATGAAACGTAGTAAA
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               951    -   1001
RU02098        --> GCCAGTAGAGGAAGACAACTGAGAATGACTGAACTAAATGGGTCCTGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- GCCAGTAGAGGAAGACAACTGAGAATGACTGAACTAAATGGGTCCTGCGC
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> GCCAGTAGAGGAAGACAA................................
CT0067264      --> GCCAGTAGAGGAAGACAACTGAGAATGACTGAAa................
ET0008454      --> ..................................................
ET0147580      --> GCCAGTAGAGGAAGACAACTGAGAATGACTGAACTAAATGGGTCCTGCGC
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               1001   -   1051
RU02098        --> CTATATGTGGAAGATATCATACACTCGGATAGAAGGAGTTCACTCAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- CTATATGTGGAAGATATCATACACTCGGATAGAAGGAGTTCACTCAGAGT
CT0139123      <-- .....................CACTCGGATAGAAGGAGTTCACTCAGAGT
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> CTATATGTGGAAGATATCATACACTCGGATAGAAGGAGTTCACTCAGAGT
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               1051   -   1101
RU02098        --> TGGAGACATGAATCTCAAACATCAAGAACAAGAGGTTAAGCATCAAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- TGGAGACATGAATCT...................................
CT0139123      <-- TGGAGACATGAATCTCAAACATCAAGAACAAGAGGTTAAGCATCAAGATA
ET0065142      <-- ..........................................TCAAGATA
ET0113542      <-- ..................................................
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> TGGAGACATGAATCTCAAACATCAAGAACAAGAGGTTAAGCATCAAGATA
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               1101   -   1151
RU02098        --> AATTTCTTGAAAACCTAAACAACAAACCAAGCCCTGAGAAAGTCTGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- AATTTCTTGAAAACCTAAACAACAAACCAAGCCCTGAGAAAGTCTGTGAA
ET0065142      <-- AATTTCTTGAAAACCTAAACAACAAACCAAGCCCTGAGAAAGTCTGTGAA
ET0113542      <-- .............CCTAAACAACAAACCAAGCCCTGAGAAAGTCTGTGAA
ET0026942      <-- ..................................................
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> AATTTCTTGAAAACCTAAACAACAAACCAAG...................
ET0015949      --> ..................................................
ET0145970      --> ..................................................

               1151   -   1201
RU02098        --> CCGGG-TATTTGAAAAGGCTCAAAAAACCCAAACCAGCATAATAAAGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- CCGGG-TATTTGAAAAGGCTCAAAAAACCCAAACCAGCATAATAAAGTCT
ET0065142      <-- CCGGG-TATTTGAAAAGGCTCAAAAAACCCAAACCAGCATAATAAAGTCT
ET0113542      <-- CCGGGGTATTTGAAAAGGCTCAAAAAACCCAAACCAGCATAATAAAGTCT
ET0026942      <-- .................................................T
CT0037611      <-- ..................................................
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..........................ACCAAAACCAGCATAATAAAGTCT
ET0145970      --> ..................................................

               1201   -   1251
RU02098        --> GGACCTTTCTGAGATTGGAGGTCAAGAAAA-T-GGGATCTTGACAGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- GGACCTTTCTGAGATTGGAGGTCAAGAAAA-T-GGGATCTTGACAGAAAA
ET0065142      <-- GGACCTTTCTGAGATTGGAGGTCAAGAAAA-T-GGGATCTTGACAGAAAA
ET0113542      <-- GGACCTTTCTGAGATTGGAGGTCAAGAAAA-T-GGGATCTTGACAGAAAA
ET0026942      <-- GGACCTTTCTGAGATTGGAGGTCAAGAAAAATAGGGATCTTGACAGAAAA
CT0037611      <-- .......TCTGAGATTGGAGGTCAAGAAAA-T-GGGATCTTGACAGAAAA
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> GGACCTTTCTGAGATTGGAGGTCAAGAAAA-T-GGGATCTTGACAGAAAA
ET0145970      --> ..................................................

               1251   -   1301
RU02098        --> AAACAAA-CCCAAAAA-CGG-CAGGATTTCAAGATGATCTTGAACCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- AAACAAA-CCCAAAAA-CGG-CAGGATTTCAAGATGATCTTGAACCAAGA
ET0065142      <-- AAACAAA-CCCAAAAA-CGG-CAGGATTTCAAGATGATCTTGAACCAAGA
ET0113542      <-- AAACAAA-CCCAAAAA-CGG-CAGGATTTCAAGATGATCTTGAACCAAGA
ET0026942      <-- AAACAAAACCCAAAAAACGGACAGGATTTCAAGATGATCTTGAACCAAGA
CT0037611      <-- AAACAAA-CCCAAAAA-CGG-CAGGATTTCAAGATGATCTTGAACCAAGA
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> AAACAAA-CCCAAAAA-CGG-CAGGATTTCAAGATGATCTTGAACCAAGA
ET0145970      --> ......................AGGATTTCAAGATGATCTTGAACCAAGA

               1301   -   1351
RU02098        --> AACCAGAAGGGACACAAGATCTCAAAGCAAAAACAAAAGCAAGGAAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- AACCAGAAGGGACACAAGATCTCAAAGCAAAAACAAAAGCAAGGAAGCTA
ET0065142      <-- AACCAGAAGGGACACAAGATCTCAAAGCAAAAACAAAAGCAAGGAAGCTA
ET0113542      <-- AACCAGAAGGGACACAAGATCTCAAAGCAAAAACAAAAGCAAGGAAGCTA
ET0026942      <-- AACCAGAAGGGACACAAGATCTCAAAGCAAAAACAAAAGCAAGGAAGCTA
CT0037611      <-- AACCAGAAGGGACACAAGATCTCAAAGCAAAAACAAA-GCAAGGAAGCTA
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> AACCAGAAGGGACACAAGATCTCAAAGCAAAAACAAAAGCAAGGAAGCTA
ET0145970      --> AACCAGAAGGGACACAAGATCTCAAAGCAAAAACAAAAGCAAGGAAGCTA

               1351   -   1401
RU02098        --> CAGGTTAAAGCTGGAGCCTTGAGGAAACAACTATGGACCAAAGGGAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- CAGGTTAAAGCTGGAGCCTTGA............................
ET0065142      <-- CAGGTTAAAGCTGGAGCCTTGAGGAAACAAC...................
ET0113542      <-- CAGGTTAAAGCTGGAGCCTTGAGGAAACAACTAT................
ET0026942      <-- CAGGTTAAAGCTGGAGCCTTGAGGAAACAACTATGGACCAAAGGGAGAAG
CT0037611      <-- CAGGTTAAAGCTGGAGCCTTGAGGAAACAACTATGGACCAAAGGGAGAAG
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> CAGGTTAAAGCTGGAGCCTTGAGGAAACAA....................
ET0145970      --> CAGGTTAAAGCTGGAGCCTTGAGGAAACAACTATGGACCAAAGGGAGAAG

               1401   -   1451
RU02098        --> AGGGCTCTGAGGGGCTTTGAGAAGGGAATTTATAGAGAAAAATGAGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ..................................................
CT0109927      <-- ..................................................
CT0042028      <-- ..................................................
ET0011975      <-- ..................................................
ET0071717      <-- ..................................................
ET0020477      <-- ..................................................
RH09E163       <-- ..................................................
CT0039450      <-- ..................................................
CT0042588      <-- ..................................................
CT0123822      <-- ..................................................
CT0123979      <-- ..................................................
CT0124072      <-- ..................................................
CT0124263      <-- ..................................................
CT0124894      <-- ..................................................
CT0124951      <-- ..................................................
CT0125239      <-- ..................................................
CT0125266      <-- ..................................................
CT0125367      <-- ..................................................
CT0125667      <-- ..................................................
CT0125961      <-- ..................................................
CT0126213      <-- ..................................................
CT0126228      <-- ..................................................
CT0126494      <-- ..................................................
CT0126688      <-- ..................................................
CT0126731      <-- ..................................................
CT0100112      <-- ..................................................
CT0124934      <-- ..................................................
CT0125549      <-- ..................................................
CT0115755      <-- ..................................................
CT0123780      <-- ..................................................
CT0123977      <-- ..................................................
CT0125540      <-- ..................................................
CT0126290      <-- ..................................................
CT0126315      <-- ..................................................
CT0126488      <-- ..................................................
CT0126509      <-- ..................................................
CT0126607      <-- ..................................................
CT0126727      <-- ..................................................
CT0126735      <-- ..................................................
ET0113853      <-- ..................................................
ET0114476      <-- ..................................................
ET0114616      <-- ..................................................
ET0115408      <-- ..................................................
ET0115876      <-- ..................................................
ET0116379      <-- ..................................................
ET0117160      <-- ..................................................
ET0117220      <-- ..................................................
ET0118824      <-- ..................................................
ET0120041      <-- ..................................................
ET0120174      <-- ..................................................
ET0120592      <-- ..................................................
ET0121307      <-- ..................................................
ET0123232      <-- ..................................................
ET0124378      <-- ..................................................
ET0081809      <-- ..................................................
CT0047371      <-- ..................................................
CT0114616      <-- ..................................................
ET0015297      <-- ..................................................
CT0116773      <-- ..................................................
CT0117747      <-- ..................................................
CT0114813      <-- ..................................................
CT0117393      <-- ..................................................
ET0065252      <-- ..................................................
ET0092339      <-- ..................................................
ET0080006      <-- ..................................................
ET0063488      <-- ..................................................
ET0088367      <-- ..................................................
CT0117845      <-- ..................................................
CT0117557      <-- ..................................................
CT0115705      <-- ..................................................
CT0056362      <-- ..................................................
CT0115525      <-- ..................................................
CT0076544      <-- ..................................................
CT0139123      <-- ..................................................
ET0065142      <-- ..................................................
ET0113542      <-- ..................................................
ET0026942      <-- AGGGCTCTGAGGGGCTTTGAGAAGGGAATTTATAGAGAAAAATGAGAGCA
CT0037611      <-- AGGGCTCTGAGGGGCTTTGAGAAGGGAATTTATAGAGAAAAATGAGAGCA
ET0074351      --> ..................................................
CT0019386      --> ..................................................
CT0010044      --> ..................................................
RH11H94        --> ..................................................
CT0054432      --> ..................................................
ET0055999      --> ..................................................
CT0027269      --> ..................................................
CT0080581      --> ..................................................
CT0072686      --> ..................................................
CT0004190      --> ..................................................
ET0124961      --> ..................................................
ET0029928      --> ..................................................
CT0050525      --> ..................................................
ET0145383      --> ..................................................
CT0118162      --> ..................................................
CT0001496      --> ..................................................
ET0005658      --> ..................................................
CT0067264      --> ..................................................
ET0008454      --> ..................................................
ET0147580      --> ..................................................
ET0015949      --> ..................................................
ET0145970      --> AGGGCTCTGAGGGGCTTTGAGAAGGGAATTTta.................

               1451   -   1501
RU02098        --> AATAGTGAGCATAAACAGAA
                   ~~~~~~~~~~~~~~~~~~~~
CT0006379      <-- ....................
CT0109927      <-- ....................
CT0042028      <-- ....................
ET0011975      <-- ....................
ET0071717      <-- ....................
ET0020477      <-- ....................
RH09E163       <-- ....................
CT0039450      <-- ....................
CT0042588      <-- ....................
CT0123822      <-- ....................
CT0123979      <-- ....................
CT0124072      <-- ....................
CT0124263      <-- ....................
CT0124894      <-- ....................
CT0124951      <-- ....................
CT0125239      <-- ....................
CT0125266      <-- ....................
CT0125367      <-- ....................
CT0125667      <-- ....................
CT0125961      <-- ....................
CT0126213      <-- ....................
CT0126228      <-- ....................
CT0126494      <-- ....................
CT0126688      <-- ....................
CT0126731      <-- ....................
CT0100112      <-- ....................
CT0124934      <-- ....................
CT0125549      <-- ....................
CT0115755      <-- ....................
CT0123780      <-- ....................
CT0123977      <-- ....................
CT0125540      <-- ....................
CT0126290      <-- ....................
CT0126315      <-- ....................
CT0126488      <-- ....................
CT0126509      <-- ....................
CT0126607      <-- ....................
CT0126727      <-- ....................
CT0126735      <-- ....................
ET0113853      <-- ....................
ET0114476      <-- ....................
ET0114616      <-- ....................
ET0115408      <-- ....................
ET0115876      <-- ....................
ET0116379      <-- ....................
ET0117160      <-- ....................
ET0117220      <-- ....................
ET0118824      <-- ....................
ET0120041      <-- ....................
ET0120174      <-- ....................
ET0120592      <-- ....................
ET0121307      <-- ....................
ET0123232      <-- ....................
ET0124378      <-- ....................
ET0081809      <-- ....................
CT0047371      <-- ....................
CT0114616      <-- ....................
ET0015297      <-- ....................
CT0116773      <-- ....................
CT0117747      <-- ....................
CT0114813      <-- ....................
CT0117393      <-- ....................
ET0065252      <-- ....................
ET0092339      <-- ....................
ET0080006      <-- ....................
ET0063488      <-- ....................
ET0088367      <-- ....................
CT0117845      <-- ....................
CT0117557      <-- ....................
CT0115705      <-- ....................
CT0056362      <-- ....................
CT0115525      <-- ....................
CT0076544      <-- ....................
CT0139123      <-- ....................
ET0065142      <-- ....................
ET0113542      <-- ....................
ET0026942      <-- AATAGTGAG...........
CT0037611      <-- AATAGTGAGCATAAACAGAA
ET0074351      --> ....................
CT0019386      --> ....................
CT0010044      --> ....................
RH11H94        --> ....................
CT0054432      --> ....................
ET0055999      --> ....................
CT0027269      --> ....................
CT0080581      --> ....................
CT0072686      --> ....................
CT0004190      --> ....................
ET0124961      --> ....................
ET0029928      --> ....................
CT0050525      --> ....................
ET0145383      --> ....................
CT0118162      --> ....................
CT0001496      --> ....................
ET0005658      --> ....................
CT0067264      --> ....................
ET0008454      --> ....................
ET0147580      --> ....................
ET0015949      --> ....................
ET0145970      --> ....................