SNPs of unigene RU02113
               17     -     67
RU02113        --> ACGAGCTACATTTAAACAGTGTTTAACAAGTCTTATCCAAGTGTTCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ACGAGCTACATTTAAACAGTGTTTAACAAGTCTTATCCAAGTGTTCCACC
CT0124580      --> .....................................CAAGTGTTCCACC
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               67     -    117
RU02113        --> TCTATATATCAAAGCTGAAGAAAACCACGGCCTAAAATCACAGATCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> TCTATATATCAAAGCTGAAGAAAACCACGGCCTAAAATCACAGATCCATC
CT0124580      --> TCTATATATCAAAGCTGAAGAAAACCACGGCCTAAAATCACAGATCCATC
ET0128262      --> .......ATCAAAGCTGAAGAAAACCACGGCCTAAAATCACAGTTCCATC
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               117    -    167
RU02113        --> GACAGAAATTAACAATGGCTCTAGAAGCCATATCTTCCAATGAGCCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> GACAGAAATTAACAATGGCTCTAGAAGCCATTTCTTCCAATGAGCCCTTC
CT0124580      --> GACAGAAATTAACAATGGCTCTAGAAGCCATTTCTTCCAATGAGCCCTTC
ET0128262      --> GACAGAAATTAACAATGGCTCTAGAAGCCATATCTTCCAATGAGCCCTTC
ET0122809      --> GACAGAAATTAACAATGGCTCTAGAAGCCATTTCTTCCAATGAGCCCTTC
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               167    -    217
RU02113        --> AACTTCATCATCTATGACACCATCTCCGCAACCTCCTACAGCTGCCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> AACTTCATCATCTATGACACCATCTCCGC.....................
CT0124580      --> AACTTCATCATCTATGACACCATCTCCGCAACCTCCTACAGCTGCCAAGA
ET0128262      --> AACTTCATCATCTATGACACCATCTCCGCAACCTCCTACAGCTGCCAAGA
ET0122809      --> AACTTCATCATCTATGACACCATCTCCGCAACCTCCTACAGCTGCCAAGA
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               217    -    267
RU02113        --> CTCTCCGGCTGTGGCCGAGACCAGCTTCTTACTGGAGAACTGTGCCACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> CTTTCCGGCTGTGGCCGAGACCAGCTTCTTACTGGAGAACTGTGCCACTA
ET0128262      --> CTCTCCGGCTGTGGCCGAGACCAGCTTCTTACTGGAGAACTGTGCCACTA
ET0122809      --> CTTTCCGGCTGTGGCCGAGACCAGCTTCTTACTGGAGAACTGTGCCACTA
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               267    -    317
RU02113        --> CTACTACTCCTACCATGAAAGAGGCCGGAGCTCAAGATCAGAATCAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- .....ACTCCTACCATTAAAGAGGCCGGAGCTCAAGATCAGAATCAAAGC
CT0001083      <-- ......CTCCTACCATTAAAGAGGCCGGAGCTCAAGATCAGAATCAAAGC
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> CTACTACTCCTACCATGAAAGAcgg.........................
ET0128262      --> CTACTACTCCTACCATTAAAGAGGCCGGAGCTCAAGATCAG.........
ET0122809      --> CTACTACTCCTACCATGAAAGAGGCCGGAGCTCAAGATCAGAATCAAAGC
CT0016463      --> .....................................TCAGAATCAAAGC
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               317    -    367
RU02113        --> GGTATTGTAGCTTTAGAGAGTTGTACCACACTCGGAACTCGAAGTCGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- GGTATTGTAGCTTTAGAGAGTTGTACCACACTCGGAACTCGAAGTCGGAG
CT0001083      <-- GGTATTGTAGCTTTAGAGAGTTGTACCACACTCGGAACTCGAAGTCGGAG
RH19S84        <-- ........................ACCACACTCGGAACTCGAAGTCGGAA
RH44BK22       <-- ........................ACCACACTCGGAACTCGAAGTCGGAA
RH59CG49       <-- ........................ACCACACTCGGAACTCGAAGTCGGAA
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> GGTATTGTAGCTTTAGAGAGTTGTACCACACTacgg..............
CT0016463      --> GGTATTGTAGCTTTAGAGAGTTGTACCACACTCGGAACTCGAAGTCGGAA
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               367    -    417
RU02113        --> CCTGACGTCTGTGACTCAACAGCAAGGGAGGAAGAAGAGGAAGCGAAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- CCTGACGTCTGTGACTCAACAGCAAGGGAGGAAGAAGAGGAAGCGAAAGC
CT0001083      <-- CCTGACGTCTGTGACTCAACAGCAAGGGAGGAAGAAGAGGAAGCGAAAGC
RH19S84        <-- CCTGACGTCTGTGACTCAACAGCAAGGGAGGAAGAAGAGGAAGCGAAAGC
RH44BK22       <-- CCTGACGTCTGTGACTCAACAGCAAGGGAGGAAGAAGAGGAAGCGAAAGC
RH59CG49       <-- CCTGACGTCTGTGACTCAACAGCAAGGGAGGAAGAAGAGGAAGCGAAAGC
CT0137977      <-- .........................................AGCGAAAGC
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> CCTGACGTCTGTGACTCAACAGCAAGGGAGGAAGAAGAGGAAGCGAAAGC
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               417    -    467
RU02113        --> CGAGGG--TTTGCAAGAACAAGGAAGAAGCCGAGACGCAGAGAATGACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- CGAGGG-GTTTGCAAGAAC...............................
CT0001083      <-- CGAGGGGTTTTGCAAGAAC...............................
RH19S84        <-- CGAGGG--TTTGCAAGAACAAGGAAGAAGCCGAGACGCAGAGAATGACAC
RH44BK22       <-- CGAGGG--TTTGCAAGAACAAGGAAGAAGCCGAGACGCAGAGAATGACAC
RH59CG49       <-- CGAGGG--TTCGCAAGAACAAGGAAGAAGCCGAGACGCAGAGAATGACAC
CT0137977      <-- CGAGGG--TTTGCAAGAACAAGGAAGAAGCCGAGACGCAGAGAATGACAC
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> CGAGGG--TTTGCAAGAACAAGGAAGAAGCCGAGACGCAGAGAATGACAC
CT0087396      --> ..........TGCAAGAACAAGGAAGAAGCCGAGACGCAGAGAATGACAC
ET0094578      --> ................................................AC
ET0098642      --> .........................................actactatt
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               467    -    517
RU02113        --> ACATTGCTGTTGAGAGAAACCGCAGAAAGCAAATGAATGAGCATCTCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ACATTGCTGTTGAGAGAAACCGCAGAAAGCAAATGAATGAGCATCTCGCT
RH44BK22       <-- ACATTGCTGTTGAGAGAAACCGCAGAAAGCAAATGAATGAGCATCTCGCT
RH59CG49       <-- ACATTGCTGTTGAGAGAAACCGCAGAAAGCAAATGAATGAGCATCTCGCT
CT0137977      <-- ACATTGCTGTTGAGAGAAACCGCAGAAAGCAAATGAATGAGCATCTCGCT
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ACATT.............................................
CT0087396      --> ACATTGCTGTTGAGAGAAACCGCAGAAAGCAAATGAATGAGCATCTCGCT
ET0094578      --> ACATTGCTGTTGAGAGAAACCGCAGAAAGCAAATGAATGAGCATCTCGCT
ET0098642      --> tgtcttgtttgtAGAGAAACCGCAGAAAGCAAATGAATGAGCATCTCGCT
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               517    -    567
RU02113        --> ATTTTGCGCTCTCTCATGCCTGAGTCTTATGCTCAAAGGGGTGACCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ATTTTGCGCTCTCTCATGCCTGAGTCTTATGCTCAAAGGGGTGACCAAGC
RH44BK22       <-- ATTTTGCGCTCTCTCATGCCTGAGTCTTATGCTCAAAGGGGTGACCAGGC
RH59CG49       <-- ATTTTGCGCTCTCTCATGCCTGAGTCTTATGCTCAAAGGGGTGACCAAGC
CT0137977      <-- ATTTTGCGCTCTCTCATGCCTGAGTCTTATGCTCAAAGGGGTGACCAAGC
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ATTTTGCGCTCTCTCATGCCTGAGTCTTATGCTCAAAGGGGTGACCAAGC
ET0094578      --> ATTTTGCGCTCTCTCATGCCTGAGTCTTATGCTCAAAGGGGTGACCAAGC
ET0098642      --> ATTTTGCGCTCTCTCATGCCTGAGTCTTATGCTCAAAGGGGTGACCAAGC
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               567    -    617
RU02113        --> CTCTATAGTGGGTGGTGCCATAGAGTTTGTGAAGGAGCTTGAGCACCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................  Control
CT0001083      <-- ..................................................  Control
RH19S84        <-- CTCTATAGTGGGTGGTGCCATAGAGTTTGTGAAGGAGCTTGAGCACCTTT  WaterDS
RH44BK22       <-- CTCTATAGTGGGTGGTGCCATAGAGTTTGTGAAGGAGCTTGAGCACCTTT  WaterDS
RH59CG49       <-- CTCTATAGTGGGTGGTGCCATAGAGTTTGTGAAGGAGCTTGAGCACCTTT  WaterDS
CT0137977      <-- CTCTATAGTGGGTGGTGCCATAGAGTTTTTGAAGGAGCTTGAGCACCTTT  Control
ET0087992      <-- ..................................................  Ethylene
CT0039395      <-- ..................................................  Control
CT0080494      <-- ..................................................  Control
CT0104249      <-- ..................................................  Control
CT0063469      <-- ..................................................  Control
CT0055877      <-- ..................................................  Control
CT0082024      <-- ..................................................  Control
ET0053587      --> ..................................................  Ethylene
CT0124580      --> ..................................................  Control
ET0128262      --> ..................................................  Ethylene
ET0122809      --> ..................................................  Ethylene
CT0016463      --> ..................................................  Control
CT0087396      --> CTCTATAGTGGGTGGTGCCATAGAGTTTTTGAAGGAGCTTGAGCACCTTT  Control
ET0094578      --> CTCTATAGTGGGTGGTGCCATAGAGTTTTTGAAGGAGCTTGAGCACCTTT  Ethylene
ET0098642      --> CTCTATAGTGGGTGGTGCCATAGAGTTTTTGAAGGAGCTTGAGCACCTTT  Ethylene
ET0126035      --> ....................TAGAGTTTTTGAAGGAGCTTGAGCACCTTT  Ethylene
RH07C279       --> ..................................................  WaterDS
CT0052161      --> ..................................................  Control
ET0120462      --> ..................................................  Ethylene
CT0023558      --> ..................................................  Control
CT0109959      --> ..................................................  Control
CT0039819      --> ..................................................  Control

               617    -    667
RU02113        --> TGCTGTCCCTTGAAGCTCAGAAGCTTCAACTTCAACAAAGCAAGGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- TGCTGTCCCTTGAAGCTCAGAAGCTTCAACTTCAACAAAGCAAGGTTGTT
RH44BK22       <-- TGCTGTCCCTTGAAGCTCAGAAGCTTCAACTTCAACAAAGCAAGGTTGTT
RH59CG49       <-- TGCTGTCCCTTGAAGCCCAGAAGCTTCAACTTCAACAAAGCAAGGTTGTT
CT0137977      <-- TGCTGTCCCTTGAAGCTCAGAAGCTTCAACTTCAACAAAGCAAGGTTGTT
ET0087992      <-- ......CCCTTGAAGCTCAGAAGCTTCAACTTCAACAAAGCAAGGTTGTT
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> TGCTGTCCCTTGAAG...................................
ET0094578      --> TGCTGTCCCTTGAAGCTCAGAAGCTTCAACTTCAACAAAGCAAGGTTGTT
ET0098642      --> TGCTGTCCCTTGAAGCTCAGAAGCTTCAACTTCAACAAAGCAAGGTTGTT
ET0126035      --> TGCTGTCCCTTGAAGCTCAGAAGCTTCAACTTCAACAAAGCAAGGTTGTT
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               667    -    717
RU02113        --> AATGAAGATAGCAGTACTACTTCCAACTCCAAA-GTTGTACAGCCAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- AATGAAGATAGCAGT...................................
RH44BK22       <-- AATGAAGATAGCAGT...................................
RH59CG49       <-- AATGAAGATAGCAGT...................................
CT0137977      <-- AATGAAGATAGCAGTAC.................................
ET0087992      <-- AATGAAGATAGCAGTACTACTTCCAACTCCAAA-GTTGTACAGCCAATTA
CT0039395      <-- ............AGTACTACTTCCAACTCCAAA-GTTGTACAGCCAATTA
CT0080494      <-- ..................ACTTCCAACTCCAAA-GTTGTACAGCCAATTA
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> AATGAAGATAGCAGTACTACT.............................
ET0098642      --> AATGAAGATAGCAGTACTACT.............................
ET0126035      --> AATGAAGATAGCAGTACTACTTCCAACTCCAAAAGTTGTACAGCCAATTA
RH07C279       --> .......................................ACAGCCAATTA
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               717    -    767
RU02113        --> TAACCCCATTCTTACAATTTTCGGAGTATGATATTTCCCAAGGTCAGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- TAACCCCATTCTTACAATTTTCGGAGTATGATATTTCCCAAGGTCAGTCG
CT0039395      <-- TAACCCCATTCTTACAATTTTCGGAGTATGATATTTCCCAAGGTCAGTCG
CT0080494      <-- TAACCCCATTCTTACAATTTTCGGAGTATGATATTTCCCAAGGTCAGTCG
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> TAACCCCATTCTTACAATTTTCGGAGTATGATATTTCCCAAGGTCAGTCG
RH07C279       --> TAACCCCATTCTTACAATTTTCGGAGTATGATATTTCCCAAGGTCAGTCG
CT0052161      --> ...............AATTTTCGGAGTATGATATTTCCCAAGGTCAGTCG
ET0120462      --> ...................TTCGGAGTATGATATTTCCCAAGGTCAGTCG
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               767    -    817
RU02113        --> TCTTGGTCTCAACAGCAGAGCCCTAACAAGTTCACATCAAAAACCAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- TCTTGGTCTCAACAGCAGAGCCCTAACAAGTTCACATC............
CT0039395      <-- TCTTGGTCTCAACAGCAGAGCCCTAACAAGTTCACATCAAAAACCAAGGC
CT0080494      <-- TCTTGGTCTCAACAGCAGAGCCCTAACAAGTTCACATCAAAAACCAAGGC
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> TCTTGGTCTCAACAGCAGAGCCCTAACAAGTTCACATCAAAAACCA-GGC
RH07C279       --> TCTTGGTCTCAACAGCAGAGCCCTAACAAGTTCACATCAAAAACCAAGGC
CT0052161      --> TCTTGGTCTCAACAGCAGAGCCCTAACAAGTTCACATCAAAAACCAAGGC
ET0120462      --> TCTTGGTCTCAACAGCAGAGCCCTAACAAGTTCACATCAAAAACCAAGGC
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               817    -    867
RU02113        --> AGACATAGCTGATATTGAGGTCACATTGATTGAGACCCACGCAAACCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- AGACATAGCTGATATTGAGGTCACATTGATTGAGACCCACGCAAACCTTC
CT0080494      <-- AGACATAGCTGATATTGAG...............................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> AGACATAGCTGAT.....................................
RH07C279       --> AGACATAGCTGATATTGAGGTCACATTGATTGAGACCCACGCAAACCTTC
CT0052161      --> AGACATAGCTGATATTGAGGTCACATTGATTGAGACCCACGCAAACCTTC
ET0120462      --> AGACATAGCTGATATTGAGGTCACATTGATTGAGACCCACGCAAACCTTC
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               867    -    917
RU02113        --> GAATTGTGACGCGAAGAATTACCCCGAGACAGCTTTCAAAGTTGGTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- GAATTGTGACGCGA....................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> GAATTGTGACGCGAAGAATTACCCCGAGACAGCTTTCAAAGTTGGTTGCA
CT0052161      --> GAATTGTGACGCGAAGAATTACCCCGAGACAGCTTTCAAAGTTGGTTGCA
ET0120462      --> GAATTGTGACGCGAAGAATTACCCCGAGACAGCTTTCAAAGTTGGTTGCA
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               917    -    967
RU02113        --> GGAGTTCAAACACTTCAACTTACCATCCTTCATCTCACTGTTAACACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> GGAGTTCAAACACTTCAACTTACCATCCTTCATCTCACTGTTAACACCAT
CT0052161      --> GGAGTT............................................
ET0120462      --> GGAGTTCAAACACTTCAACTTACCATCCTTCATCTCACTGTTAACACCAT
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               967    -   1017
RU02113        --> CTACCCTTTTGTTCTCTACTCCATTAGTGTCAAGAAGAAAGGAAGGGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> CTACCCTTTTGTTCTCTACTCCATTAGTGTCAAGAAGAAAGGAAGGGTGG
CT0052161      --> ..................................................
ET0120462      --> CTACCCTTTTGTTCT...................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               1017   -   1067
RU02113        --> TGGCCTGGGGCGTGTCATAGTCATACTATTAGATTGAAGAAGGGTGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- ..................................................
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> TGGCCTGGGGCGTGTCATAGTCATACTATTAGATTGAAGAAGGGTGCTTA
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               1067   -   1117
RU02113        --> CTCACTTCAGTAGATGACATAGCAGCAGCATTTTACCACATGCTTAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- .........................................GCTTAGAGT
CT0063469      <-- ..................................................
CT0055877      <-- ..................................................
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> CTCACTTCAGTAGATGACATAGCAGCAGCATTTTACCACATGCTTAGAGT
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ....CTTCAGTAGATGACATAGCAGCAGCATTTTACCACATGCTTAGAGT
CT0109959      --> ..................................................
CT0039819      --> ..................................................

               1117   -   1167
RU02113        --> AATTGAGGAAGCAGCTGCCTTGTGTTAATATAAGTGTTATGACTTTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- AATTGAGGAAGCAGCTGCCTTGTGTTAATATAAGTGTTATGACTTTTACC
CT0063469      <-- .................CCTTGTGTTAATATAAGTGTTATGACTTTTACC
CT0055877      <-- ..................CTTGTGTTAATATAAGTGTTATGACTTTTACC
CT0082024      <-- ........................TTAATATAAGTGTTATGACTTTTACC
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> AATTGAGGAAGCAGCTGCCTTGTGTTAATATAAGTGTTATGACTTTTACC
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> AATTGAGGAAGCAGCTGCCTTGTGTTAATATAAGTGTTATGACTTTTACC
CT0109959      --> ......................TGTTAATATAAGTGTTATGACTTTTACC
CT0039819      --> ..................................................

               1167   -   1217
RU02113        --> TGACTCAATGCTCTAATTAGGCTTAGCTATAGGAGTGCCACCACTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- TGACTCAATGCTCTAATTAGGCTTAGCTATAGGAGTGCCACCACTTTTTT
CT0063469      <-- TGACTCAATGCTCTAATTAGGCTTAGCTATAGGAGTGCCACCACTTTTTT
CT0055877      <-- TGACTCAATGCTCTAATTAGGCTTAGCTATAGGAGTGCCACCACTTTTTT
CT0082024      <-- TGACTCAATGCTCTAATTAGGCTTAGCTATAGGAGTGCCACCACTTTTTT
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> TGACTCAATGCTCTAATTAGGCTTAGCTATAGGAGTGCCACCACTTTTTT
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> TGACTCAATGCTCTAATTAGGCTTAGCTATAGGAGTGCCACCACTTT...
CT0109959      --> TGACTCAATGCTCTAATTAGGCTTAGCTATAGGAGTGCCACCACTTTTTT
CT0039819      --> ..........................tataAGGAGTGCCACCACTTTTTT

               1217   -   1267
RU02113        --> TAATTTCTGCAATAAAGCTTCCCTTGTTTTTGTATGTAGCTACAGTAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- TAATTTCTGCAATAAAGCTTCCCTTGTTTTTGTATGTAGCTACAGTAGTA
CT0063469      <-- TAATTTCTGCAATAAAGCTTCCCTTGTTTTTGTATGTAGCTACAGTAGTA
CT0055877      <-- TAATTTCTGCAATAAAGCTTCCCTTGTTTTTGTATGTAGCTACAGTAGTA
CT0082024      <-- -AATTTCTGCAATAAAGCTTCCCTTGTTTTTGTATGTAGCTACAGTAGTA
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> TAATTTCTGCAATAAAGCTTCCCTTGTTTTTGTATGTAGCTACAGTAGTA
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> TAATTTCTGCAATAAAGCTTCCCTTGTTTTTGTATGTAGCTACAGTAGTA
CT0039819      --> TAATTTCTGCAATAAAGCTTCTCTTGTTTTTGTATGTAGCTACAGTAGTA

               1267   -   1317
RU02113        --> AATAGGTTGAAATTTCCTTCTGCTTCCTTTTGGGTACAAGACAATTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- AATAGGTTGAAATTTCCTTCTGCTTCCTTTTGGGTACAAGACAATTTCTT
CT0063469      <-- AATAGGTTGAAATTTCCTTCTGCTTCCTTTTGGGTACAAGACAATTTCTT
CT0055877      <-- AATAGGTTGAAATTTCCTTCTGCTTCCTTTTGGGTACAAGACAATTTCTT
CT0082024      <-- AATAGGTTGAAATTTCC.................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> AATAGGTTGAAATTTCC.................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> AATAGGTTGAAATTTCCTTCTGCTTCCTTTTagggt..............
CT0039819      --> AATAGGTTGAAATTTCCTTCTGCTTCCTTTTGGGTACAAGACAATTTCTT

               1317   -   1367
RU02113        --> AGGGTGCGGTTTCCAAGTTTCCTTAATTTGCAATTGAGTCCAAAATCGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..................................................
CT0001083      <-- ..................................................
RH19S84        <-- ..................................................
RH44BK22       <-- ..................................................
RH59CG49       <-- ..................................................
CT0137977      <-- ..................................................
ET0087992      <-- ..................................................
CT0039395      <-- ..................................................
CT0080494      <-- ..................................................
CT0104249      <-- AGGGTGCGGTTTCCAAGTTTCCTTAATTTGCAATTGAGTCC.........
CT0063469      <-- AGGGTGCGGTTTCCAAGTTTCCTTAATTTGCAATTGAGTCCAAAATCGCG
CT0055877      <-- AGGGTGCGGTTTCCAAGTTTCCTTAATTTGCAATTGAGTCCAAAATCGCG
CT0082024      <-- ..................................................
ET0053587      --> ..................................................
CT0124580      --> ..................................................
ET0128262      --> ..................................................
ET0122809      --> ..................................................
CT0016463      --> ..................................................
CT0087396      --> ..................................................
ET0094578      --> ..................................................
ET0098642      --> ..................................................
ET0126035      --> ..................................................
RH07C279       --> ..................................................
CT0052161      --> ..................................................
ET0120462      --> ..................................................
CT0023558      --> ..................................................
CT0109959      --> ..................................................
CT0039819      --> AGGGTGCGGTTTCCAAaagtttt...........................

               1367   -   1417
RU02113        --> TTAATCTTGTATCACTTTTTAGTTTTTATGAAAGACAACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0003506      <-- ..........................................
CT0001083      <-- ..........................................
RH19S84        <-- ..........................................
RH44BK22       <-- ..........................................
RH59CG49       <-- ..........................................
CT0137977      <-- ..........................................
ET0087992      <-- ..........................................
CT0039395      <-- ..........................................
CT0080494      <-- ..........................................
CT0104249      <-- ..........................................
CT0063469      <-- TTAATCTTGTATCACTTTTTAGTTTTTATGAAAGACAACTTC
CT0055877      <-- TTAATCTTGTATCACTTTTTAGTTTTTATGAAAGACAACTTC
CT0082024      <-- ..........................................
ET0053587      --> ..........................................
CT0124580      --> ..........................................
ET0128262      --> ..........................................
ET0122809      --> ..........................................
CT0016463      --> ..........................................
CT0087396      --> ..........................................
ET0094578      --> ..........................................
ET0098642      --> ..........................................
ET0126035      --> ..........................................
RH07C279       --> ..........................................
CT0052161      --> ..........................................
ET0120462      --> ..........................................
CT0023558      --> ..........................................
CT0109959      --> ..........................................
CT0039819      --> ..........................................