SNPs of unigene RU03310
               1      -     51
RU03310        --> TGTCGAG-GTCTGAAGAGCTTCTGA-TCAGATTCGAAAACCATGGCGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- TGTCGAGCGTCTGAAGAGCTTCTGA-TCAGATTCGAAAACCATGGCGTGC
ET0138472      <-- TGTCGAGCGTCTGAAGAGCTTCTGA-TCAGATTCGAAAACCATGGCGTGC
CT0005188      <-- .......................................CCATGGCGTGC
ET0090549      <-- ..................................................
RH44BL30       <-- ..................................................
RH50BT7        <-- ..................................................
RH39BD55       <-- ..................................................
CT0010821      --> ......agaaaaGAAGAGCTTCTGA-TCAGATTCGAAAACCATGGCGTGC
CT0073787      --> ...........aGAAGAGCTTCTGAATCAGATTCGAAAACCATGGCGTGC
CT0077714      --> .....gagaaaaGAAGAGCTTCTGA-TCAGATTCGAAAACCATGGCGTGC
ET0033520      --> .......gaaaaGAAGAGCTTCTGA-TCAGATTCGAAAACCATGGCGTGC
ET0042346      --> ..........................TCAGATTCGAAAACCATGGCGTGC
ET0124841      --> ..............................ATTCGAAAACCATGGCGTGC
ET0056673      --> .................................CGAAAACCATGGCGTGC
CT0117300      --> .......................................CCATGGCGTGC
ET0119882      --> .......................................CCATGGCGTGC
ET0121270      --> .......................................CCATGGCGTGC
CT0100051      --> ..................................................
ET0035945      --> ..................................................
CT0031513      --> ..................................................
ET0110361      --> ..................................................
ET0032602      --> ..................................................

               51     -    101
RU03310        --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
ET0138472      <-- TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
CT0005188      <-- TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
ET0090549      <-- ..........................GCGCTTCTCTAACGATCTAACGTC
RH44BL30       <-- ..................................................
RH50BT7        <-- ..................................................
RH39BD55       <-- ..................................................
CT0010821      --> TTATTATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
CT0073787      --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
CT0077714      --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
ET0033520      --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
ET0042346      --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
ET0124841      --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
ET0056673      --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
CT0117300      --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
ET0119882      --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
ET0121270      --> TTATCATCTCCATCACTTTCGACCCTGCGCTTCTCTAACGATCTAACGTC
CT0100051      --> ..................................................
ET0035945      --> ..................................................
CT0031513      --> ..................................................
ET0110361      --> ..................................................
ET0032602      --> ..................................................

               101    -    151
RU03310        --> GGTGGCGCTGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGGGTTACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- GGCGGCGCCGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGAGGTACGA
ET0138472      <-- GGCGGCGCCGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGAGGTACGA
CT0005188      <-- GGTGGCGCTGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGGGTTACGA
ET0090549      <-- GGCGGCGCCGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGAGGTACGA
RH44BL30       <-- ..............................................ACGA
RH50BT7        <-- ..............................................ACGA
RH39BD55       <-- ..................................................
CT0010821      --> GGTGGCGCTGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGGGTTACGA
CT0073787      --> GGCGGCGC-GGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGAGGTACGA
CT0077714      --> GGCGGCGCCGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGAGGTACGA
ET0033520      --> GGTGGCGCTGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGGGTTACGA
ET0042346      --> GGCGGCGCCGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGAGGTACGA
ET0124841      --> GGTGGCGCTGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGGGTTATGA
ET0056673      --> GGCGGCGCCGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGAGGTACGA
CT0117300      --> GGTGGCGCTGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGGGTTACGA
ET0119882      --> GGCGGCGCCGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGAGGTACGA
ET0121270      --> GGTGGCGCTGGTGTCCTTTGCGAGATCGGGCCTGGCGGTTCGGGTTACGA
CT0100051      --> ..................................................
ET0035945      --> ..................................................
CT0031513      --> ..................................................
ET0110361      --> ..................................................
ET0032602      --> ..................................................

               151    -    201
RU03310        --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Ethylene
ET0138472      <-- ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Ethylene
CT0005188      <-- ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Control
ET0090549      <-- ATCCGGGTGGGGCAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Ethylene
RH44BL30       <-- ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGCGGCCAAGTT  WaterDS
RH50BT7        <-- ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGCGGCCAAGTT  WaterDS
RH39BD55       <-- ..................................................  WaterDS
CT0010821      --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGG.............  Control
CT0073787      --> AT................................................  Control
CT0077714      --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGT..................  Control
ET0033520      --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Ethylene
ET0042346      --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Ethylene
ET0124841      --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Ethylene
ET0056673      --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Ethylene
CT0117300      --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Control
ET0119882      --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Ethylene
ET0121270      --> ATCCGGGTGGG-CAGAGGAAGGCGATGAGAGTGATGGCGGTGGCCAAGTT  Ethylene
CT0100051      --> ..................................................  Control
ET0035945      --> ..................................................  Ethylene
CT0031513      --> ..................................................  Control
ET0110361      --> ..................................................  Ethylene
ET0032602      --> ..................................................  Ethylene

               201    -    251
RU03310        --> CAAGGGGACGCAGATGAGGGAGAAGCGGCTGACGGAGATGATCGAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- CAAGGGGACGCAGATGAGGGAG............................
ET0138472      <-- CAAGGGGACGCAGATGAGGGAG............................
CT0005188      <-- CAAGGGG...........................................
ET0090549      <-- CAAGGGGACGCAGATGAGGGAGAAGCGGCTGACGGAGATGATCGAGAAGA
RH44BL30       <-- CAAGGGGACGCAGATGAGGGAGAAGCGGCTGACGGAGATGATCGAGAAGA
RH50BT7        <-- CAAGGGGACGCAGATGAGGGAGAAGCGGCTGACGGAGATGATCGAGAAGA
RH39BD55       <-- ..................................................
CT0010821      --> ..................................................
CT0073787      --> ..................................................
CT0077714      --> ..................................................
ET0033520      --> CAAGGGGACGCAGATGAGGGAGAAGCGGCTGAC.................
ET0042346      --> CAAGGGGACGCAGATGAGGG..............................
ET0124841      --> CAAGGGGACGCAGATGAGGGAGAAGCGGCTGACGGAGATGATCGAGAAGA
ET0056673      --> CAAGGGGACGCAGATGAGGGAGAAGCGGCTGACGGAGATGATCGAGAAGA
CT0117300      --> CAAGGGGACGCAGATGAGGGAGAAGCGGCTGAC.................
ET0119882      --> CAAGGGGACGCAGATGAGGGAGAAGCGGCTGACGGAGATGATCGAGAAGt
ET0121270      --> CAAGGGGACGCAGATGAGGGAGAAGCGGCTGACGGAGATGATCGAGAAG.
CT0100051      --> ..................................................
ET0035945      --> ..................................................
CT0031513      --> ..................................................
ET0110361      --> ..................................................
ET0032602      --> ..................................................

               251    -    301
RU03310        --> AGGTTCTGGAAGCCAAGCAGGTGTGCGGCGAGGGAGATCTGATCACGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- ..................................................
ET0138472      <-- ..................................................
CT0005188      <-- ..................................................
ET0090549      <-- AGGTTCTGGAAGCCAAGCAGGTGTGCGGCGAGGGAGATCTGATCACGGAC
RH44BL30       <-- AGGTTCTGGAAGCCAAGCAGGTGTGCGGCGAGGGAGATCTGATCACGGAC
RH50BT7        <-- AGGTTCTGGAAGCCAAGCAGGTGTGCGGCGAGGGAGATCTGATCACGGAC
RH39BD55       <-- .............CAAGCAGGTGTGCGGCGAGGGAGATCTGATCACGGAC
CT0010821      --> ..................................................
CT0073787      --> ..................................................
CT0077714      --> ..................................................
ET0033520      --> ..................................................
ET0042346      --> ..................................................
ET0124841      --> AGGTTCTGGAAGCCAAGCAGGTG...........................
ET0056673      --> AGGTTCTGGAAGCCAAGCAGGTGTGCGG......................
CT0117300      --> ..................................................
ET0119882      --> a.................................................
ET0121270      --> ..................................................
CT0100051      --> ..................................................
ET0035945      --> ..................................................
CT0031513      --> ..................................................
ET0110361      --> ..................................................
ET0032602      --> ..................................................

               301    -    351
RU03310        --> GAGTGCAAGGTGGCGTGGGATGAGGTGGAGGAGGTGAGTCAAGCCAAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- ..................................................
ET0138472      <-- ..................................................
CT0005188      <-- ..................................................
ET0090549      <-- GAGTGCAAGGT.......................................
RH44BL30       <-- GAGTGCAAGGTGGCGTGGGATGAGGTGGAGGAGGTGAGTCAAGCCAAGGC
RH50BT7        <-- GAGTGCAAGGTGGCGTGGGATGAGGTGGAGGAGGTGAGTCAAGCCAAGGC
RH39BD55       <-- GAGTGCAAGGTGGCGTGGGATGAGGTGGAGGAGGTGAGTCAAGCCAAGGC
CT0010821      --> ..................................................
CT0073787      --> ..................................................
CT0077714      --> ..................................................
ET0033520      --> ..................................................
ET0042346      --> ..................................................
ET0124841      --> ..................................................
ET0056673      --> ..................................................
CT0117300      --> ..................................................
ET0119882      --> ..................................................
ET0121270      --> ..................................................
CT0100051      --> ..................GATGAGGTGGAGGAGGTGAGTCAAGCCAAGGC
ET0035945      --> ..................................................
CT0031513      --> ..................................................
ET0110361      --> ..................................................
ET0032602      --> ..................................................

               351    -    401
RU03310        --> CGATCTCAGGCTCAAAATGAAGGACAGTGATCCTCTCGAGTCGTTTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- ..................................................
ET0138472      <-- ..................................................
CT0005188      <-- ..................................................
ET0090549      <-- ..................................................
RH44BL30       <-- CGATCTCAGGCTCAAAATGAAGGACAGTGATCCTCCCGAGTCGTTTTGCC
RH50BT7        <-- CGATCTCAGGCTCAAAATGAAGGACAGTGATCCTCCCGAGTCGTTTTGCC
RH39BD55       <-- CGATCTCAGGCTCAAAATGAAGGACAGTGATCCTCTCGAGTCGTTTTGCC
CT0010821      --> ..................................................
CT0073787      --> ..................................................
CT0077714      --> ..................................................
ET0033520      --> ..................................................
ET0042346      --> ..................................................
ET0124841      --> ..................................................
ET0056673      --> ..................................................
CT0117300      --> ..................................................
ET0119882      --> ..................................................
ET0121270      --> ..................................................
CT0100051      --> CGATCTCAGGCTCAAAATGAAGGACAGTGATCCTCTCGAGTCGTTTTGCC
ET0035945      --> ...........................................TTTTGCC
CT0031513      --> ..................................................
ET0110361      --> ..................................................
ET0032602      --> ..................................................

               401    -    451
RU03310        --> AGGACAATCCTGAGACGGACGAGTGTCGAATCTACGAGGACTGATCCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- ..................................................
ET0138472      <-- ..................................................
CT0005188      <-- ..................................................
ET0090549      <-- ..................................................
RH44BL30       <-- AGGACAATCCTGAGACGGACGAGTGTCGAATCTACGAGGACTGATCCACC
RH50BT7        <-- AGGACAATCCTGAGACGGACGAGTGTCGAATCTACGAGGACTGATCCACC
RH39BD55       <-- AGGACAATCCTGAGACGGACGAGTGTCGAATCTACGAGGACTGATCCACC
CT0010821      --> ..................................................
CT0073787      --> ..................................................
CT0077714      --> ..................................................
ET0033520      --> ..................................................
ET0042346      --> ..................................................
ET0124841      --> ..................................................
ET0056673      --> ..................................................
CT0117300      --> ..................................................
ET0119882      --> ..................................................
ET0121270      --> ..................................................
CT0100051      --> AGGACAATCCTGAGACGGACGAGTGTCGAATCTACGAGGACTGATCCACC
ET0035945      --> AGGACAATCCTGAGACGGACGAGTGTCGAATCTACGAGGACTGATCCACC
CT0031513      --> ..................................................
ET0110361      --> ..................................................
ET0032602      --> ..................................................

               451    -    501
RU03310        --> ATCTCCATCGTTATAGCAATATATGGTGTTGGTCAATGTGTGCTGCCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- ..................................................
ET0138472      <-- ..................................................
CT0005188      <-- ..................................................
ET0090549      <-- ..................................................
RH44BL30       <-- ATCTCCATCGTTATAGCAATATATGGTGTTGGTCAATGTGTGCTGCCCTG
RH50BT7        <-- ATCTCCATCGTTATAGCAATATATGGTGTTGGTCAATGTGTGCTGCCCTG
RH39BD55       <-- ATCTCCATCGTTATAGCAATATATGGTGTTGGTCAATGTGTGCTGCCCTG
CT0010821      --> ..................................................
CT0073787      --> ..................................................
CT0077714      --> ..................................................
ET0033520      --> ..................................................
ET0042346      --> ..................................................
ET0124841      --> ..................................................
ET0056673      --> ..................................................
CT0117300      --> ..................................................
ET0119882      --> ..................................................
ET0121270      --> ..................................................
CT0100051      --> ATCTCCATCGTTATAGCAATATATGGTGTTGGTCAATGTGTG........
ET0035945      --> ATCTCCATCGTTATAGCAATATATGGTGTTGGTCAATGTGTGCTGCCCTG
CT0031513      --> .................................CAATGTGTGCTGCCCTG
ET0110361      --> ...................................ATGTGTGCTGCCCTG
ET0032602      --> .......................................GTGCTGCCCTG

               501    -    551
RU03310        --> GTCAGATTTATTAACTAGGATTAATTAGCACCGTTTGTGGAAGTTTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- ..................................................
ET0138472      <-- ..................................................
CT0005188      <-- ..................................................
ET0090549      <-- ..................................................
RH44BL30       <-- GTCAGATTTATTAACTAGGATTAATTAGCACCGTTTGTGGAAGTTTGGTG
RH50BT7        <-- GTCAGATTTATTAACTAGGATTAATTAGCACCGTTTGTGGAAGTTTGGTG
RH39BD55       <-- GTCAGATTTATTAACTAGGATTAATTAGCACCGTTTGTGGAAGTTTGGTG
CT0010821      --> ..................................................
CT0073787      --> ..................................................
CT0077714      --> ..................................................
ET0033520      --> ..................................................
ET0042346      --> ..................................................
ET0124841      --> ..................................................
ET0056673      --> ..................................................
CT0117300      --> ..................................................
ET0119882      --> ..................................................
ET0121270      --> ..................................................
CT0100051      --> ..................................................
ET0035945      --> GTCAGATTTATTAACTAGGATTAATTAGCACCGTTTGTGGAAGTTTGGTG
CT0031513      --> GTCAGATTTATTAACTAGGATTAATTAGCACCGTTTGTGGAAGTTTGGTG
ET0110361      --> GTCAGATTTATTAACTAGGATTAATTAGCACCGTTTGTGGAAGTTTGGTG
ET0032602      --> GTCAGATTTATTAACTAGGATTAATTAGCACCGTTTGTGGAAGTTTGGTG

               551    -    601
RU03310        --> TATTGATAGTTTAATACCC-GAGTGTACAATCTAACTATTATGTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- ..................................................
ET0138472      <-- ..................................................
CT0005188      <-- ..................................................
ET0090549      <-- ..................................................
RH44BL30       <-- TAT...............................................
RH50BT7        <-- TAT...............................................
RH39BD55       <-- TAT...............................................
CT0010821      --> ..................................................
CT0073787      --> ..................................................
CT0077714      --> ..................................................
ET0033520      --> ..................................................
ET0042346      --> ..................................................
ET0124841      --> ..................................................
ET0056673      --> ..................................................
CT0117300      --> ..................................................
ET0119882      --> ..................................................
ET0121270      --> ..................................................
CT0100051      --> ..................................................
ET0035945      --> TATTGATAGTTTAATACCC-GAGTGTACAATCTAACTATTATGTTTTTTT
CT0031513      --> TATTGATAGTTTAATACCC-GAGTGTACAATCTAACTATTATGTTTTTTT
ET0110361      --> TATTGATAGTTTAATACCC-GAGTGTACAATCTAACTATTATGTTTTTTT
ET0032602      --> TATTGATAGTTTAATACCCCGAGTGTACAATCTAACTATTATGTTTTTTT

               601    -    651
RU03310        --> TTTA-A--ATTATTA-TTATTATTTTTGTTTTTTGAGAATATATCTAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0127574      <-- ..................................................
ET0138472      <-- ..................................................
CT0005188      <-- ..................................................
ET0090549      <-- ..................................................
RH44BL30       <-- ..................................................
RH50BT7        <-- ..................................................
RH39BD55       <-- ..................................................
CT0010821      --> ..................................................
CT0073787      --> ..................................................
CT0077714      --> ..................................................
ET0033520      --> ..................................................
ET0042346      --> ..................................................
ET0124841      --> ..................................................
ET0056673      --> ..................................................
CT0117300      --> ..................................................
ET0119882      --> ..................................................
ET0121270      --> ..................................................
CT0100051      --> ..................................................
ET0035945      --> TTTA-ATTATTATTATTTATTTTTTTTGTTTTTTGAGAATATATCTAACT
CT0031513      --> TTTA-T--ATTATTA-TTATTTTTTTTGTTTTTTGAGAATATATCTAACT
ET0110361      --> TTTT-A--ATTATTA-TTATTATTTTTTTTGTTTtttgtag.........
ET0032602      --> TTAATT--ATTATTA-TTATTTTTTTTGTTTTTTGAGAATATATCTAACT

               651    -    701
RU03310        --> ATTATGTTGTACT
                   ~~~~~~~~~~~~~
ET0127574      <-- .............
ET0138472      <-- .............
CT0005188      <-- .............
ET0090549      <-- .............
RH44BL30       <-- .............
RH50BT7        <-- .............
RH39BD55       <-- .............
CT0010821      --> .............
CT0073787      --> .............
CT0077714      --> .............
ET0033520      --> .............
ET0042346      --> .............
ET0124841      --> .............
ET0056673      --> .............
CT0117300      --> .............
ET0119882      --> .............
ET0121270      --> .............
CT0100051      --> .............
ET0035945      --> ATTATGTT.....
CT0031513      --> ATTATGTTGTACT
ET0110361      --> .............
ET0032602      --> ATTATGTTGTAC.