SNPs of unigene RU03432
               1      -     51
RU03432        --> CGTTGTTCACAGCTCGACCTAGTCGAAACCAGTCAGTCTTCTTCTCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ...........GCTCGACCTAGTCGAAACCAGTCAGTCTTCTTCTCTCAG
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> CGTTGTTCACAGCTCGACCTAGTCGAAACCAGTCAGTCTTCTTCTCTCAG
ET0021174      --> .......CACAGCTCGACCTAGTCGAAACCAGTCAGTCTTCTTCTCTCAG
CT0010341      --> ............CTCGACCTAGTCGAAACCAGTCAGTCTTCTTCTCTCAG
CT0025810      --> ............CTCGACCTAGTCGAAACCAGTCAGTCTTCTTCTCTCAG
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               51     -    101
RU03432        --> CTTCACCACTAGACTTCGTCTTCTCCGTTTCCGACTACACCAGCAGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- CTTCACCACTAGACTTCGTCTTCTCCGTTTCCGACTACACCAGCAGCAAT
CT0102144      <-- ................CGTCTTCTCCGTTTCCGACTACACCAGCAGCAAT
CT0104616      <-- ................CGTCTTCTCCGTTTCCGACTACACCAGCAGCAAT
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> CTTCACCACTAGACTTCGTCTTCTCCGTTTCCGACTACACCAGCAGCAAT
ET0021174      --> CTTCACCACTAGACTTCGTCTTCTCCGTTTCCGACTACACCAGCAGCAAT
CT0010341      --> CTTCACCACTAGACTTCGTCTTCTCCGTTTCCGACTACACCAGCA---AT
CT0025810      --> CTTCACCACTAGACTTCGTCTTCTCCGTTTCCGACTACACCAGCA---AT
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               101    -    151
RU03432        --> CATGGCAGATGATCAGAATGATGTGAAGGAGGAGGTGGCGCTGGCAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- CATGGCAGATGATCAGAATGATGTGAAGGAGGAGGTGGCGCTGGCAGACA
CT0102144      <-- CATGGCAGATGATCAGAATGATGTGAAGGAGGAGGTGGCGCTGGCAGACA
CT0104616      <-- CATGGCAGATGATCAGAATGATGTGAAGGAGGAGGTGGCGCTGGCAGACA
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> CATGGCAGATGATCAGAATGATGTGAAGGAGGAGGTGGCGCTGGCAGACA
ET0021174      --> CACGGCAGATGATCAGAATGATGTGAAGGAGGAGGTGGCGCTGGCAGACA
CT0010341      --> CATGGCAGATGATCAGAATGATGTGAAGGAGGAGGTGGCGCTGGCAGACA
CT0025810      --> CATGGCAGATGATCAGAATGATGTGAAGGAGGAGGTGGCGCTGGCAGACA
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               151    -    201
RU03432        --> TTGCCCCTTTTGATCCTAGTAAAAAGAAGAAGAAGAAGAAGGTTGTAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- TTGCCCCTTTTGATCCTAGTAAAAAGAAGAAGAAGAAGAAGGTTGTAATT
CT0102144      <-- TTGCCCCTTTTGATCCTAGTAAAAAGAAGAAGAAGAAGAAGGTTGTAATT
CT0104616      <-- TTGCCCCTTTTGATCCTAGTAAAAAGAAGAAGAAGAAGAAGGTTGTAATT
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> TTGCCCCTTTTGATCCTAGTAAAAAGAAGAAGAAGAAGAAGGTTGTAATT
ET0021174      --> TTGCCCCTTTTGATCCTAGTAAAAAGAAGAAGAAGAAGAAGGTTGTAATT
CT0010341      --> TTGCCCCTTTTGATCCTAGTAAAAAGAAGAAGAAGAAGAAGGTTGTAATT
CT0025810      --> TTGCCCCTTTTGATCCTAGTAAAAAGAAGAAGAAGAAGAAGGTTGTAATT
ET0141021      --> .gcCCCCTTTTGATCC-AG-AAAAAGAAGAAGAAGAAGAAGGTTGTAATT
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               201    -    251
RU03432        --> GAGGATCCAGCTGATGATTCTGTGGACAAGTTGGCTGAGAAAACGGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- GAGGATCCAGCTGATGATTCTGTGGACAAGTTGGCTGAGAAAACGGAAAG
CT0102144      <-- GAGGATCCAGCTGATGATTCTGTGGACAAGTTGGCTGAGAAAACGGAAAG
CT0104616      <-- GAGGATCCAGCTGATGATTCTGTGGACAAGTTGGCTGAGAAAACGGAAAG
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> GAGGATCCAGCTGATGATTCTGTGGACAAGTTGGCTGAGAAAACGGAAAG
ET0021174      --> GAGGATCCAGCTGATGATTCTGTGGACAAGTTG.................
CT0010341      --> GAGGATCCAGCTGATGATTCTGTGGACAAGTTGGCTGAGAAAA.......
CT0025810      --> GAGGATCCAGCTGATGATTCTGTGGACAAGTTGGCTGAGAAA........
ET0141021      --> GAGGATCCAGCTGATGATTCTGTGGACAAGTTGGCTGAGAAAACGGAAAG
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               251    -    301
RU03432        --> CCTGGCAGTTTCTGATGGGCAGGACAGTGCATTTTCTGGTCTGAAAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- CCTGGCAGTTTCTGATGGGCAGGACAGTGCATTTTCTGGTCTGAAAAAGA  WaterDS
CT0102144      <-- CCTGGCAGTTTCTGATGGGCAGGACAGTGCTTTTTCTGGTCTGAAAAAGA  Control
CT0104616      <-- CCTGGCAGTTTCTGATGGGCAGGACAGTGCTTTTTCTGGTCTGAAAAAGA  Control
CT0006243      <-- ..................................................  Control
CT0043151      <-- ..................................................  Control
CT0077051      <-- ..................................................  Control
CT0078916      <-- ..................................................  Control
ET0003027      <-- ..................................................  Ethylene
CT0133784      <-- ..................................................  Control
CT0080622      <-- ..................................................  Control
ET0059297      <-- ..................................................  Ethylene
CT0034685      <-- ..................................................  Control
CT0050622      <-- ..................................................  Control
CT0048182      <-- ..................................................  Control
ET0112391      <-- ..................................................  Ethylene
ET0116577      <-- ..................................................  Ethylene
CT0048591      <-- ..................................................  Control
ET0094350      <-- ..................................................  Ethylene
CT0037884      <-- ..................................................  Control
CT0028602      <-- ..................................................  Control
RH04C75        --> CCTGGCAGTTTCTGATGGGCAGGACAGTGCATTTTCTGGTCTGAAAAAGA  WaterDS
ET0021174      --> ..................................................  Ethylene
CT0010341      --> ..................................................  Control
CT0025810      --> ..................................................  Control
ET0141021      --> CCTGGCAGTTTCTGATGGGCAGGACAGTGCATATTCTGGTCTGAAAAAGA  Ethylene
CT0102744      --> ..................................................  Control
CT0050653      --> ..................................................  Control
CT0072009      --> ..................................................  Control
CT0012941      --> ..................................................  Control
CT0092448      --> ..................................................  Control

               301    -    351
RU03432        --> AGAAGAAGAAGCCAATTGAGACCAGTATTTTGAATGAGGAGCCTGGCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- AGAAGAAGAAGCCAATTGAGACCAGTATTTTGAATGAGGAGCCTGGCGAT
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................TGAGGAGCCTGGCGAT
CT0043151      <-- ..................................TGAGGAGCCTGGCGAT
CT0077051      <-- ..................................TGAGGAGCCTGGCGAT
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> AGAAGAAGAAGCCAATTGAGACCAGTATTTTGAATGAGGAGCCTGGCGAT
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> AGAAGAAGAAGCCAATTGAGACCAGTATTTTGAATGAGGAGCCTGGCGAT
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               351    -    401
RU03432        --> GTACCGGAGGATTTGGATGAGCACCCGGGTGAGGATGAAGAAGGAGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- GT................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- GTACCGGAGGATTTGGATGAGCACCCGGGTGAGGATGAAGAAGGAGAAGG
CT0043151      <-- GTACCGGAGGATTTGGATGAGCACCCGGGTGAGGATGAAGAAGGAGAAGG
CT0077051      <-- GTACCGGAGGATTTGGATGAGCACCCGGGTGAGGATGAAGAAGGAGAAGG
CT0078916      <-- ................................................gG
ET0003027      <-- ................................................gG
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> GT................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> GTACCGGAGGATTTGGATGAGCACCCGGGTGAGGA...............
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               401    -    451
RU03432        --> AATTTTACTGGAGGCCTCCAATCCTTGGGAGGGTAGTGATCGTGATTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- AATTTTACTGGAGGCCTCCAATCCTTGGGAGGGTAGTGATCGTGATTATG
CT0043151      <-- AATTTTACTGGAGGCCTCCAATCCTTGGGAGGGTAGTGATCGTGATTATG
CT0077051      <-- AATTTTACTGGAGGCCTCCAATCCTTGGGAGGGTAGTGATCGTGATTATG
CT0078916      <-- AATTTTACTGGAGGCCTCCA-TCCTTGGGAGGGTAGTGATCGTGATTATG
ET0003027      <-- AATTTTACTGGAGGCCTCCAATCCTTGGGAGGGTAGTGATCGTGATTATG
CT0133784      <-- .....TACTGGAGGCCTCCAATCCTTGGGAGGGTAGTGATCGTGATTATG
CT0080622      <-- .........................TGGGAGGGTAGTGATCGTGATTATG
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               451    -    501
RU03432        --> AATATGAGGAGCTTCTTGGAAGGGTGTATAACATTCTTAGGGAGAATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- AATATGAGGAGCTTCTTGGAAGGGTGTATAACATTCTTAGGGAGAATAAT
CT0043151      <-- AATATGAGGAGCTTCTTGGAAGGGTGTATAACATTCTTAGGGAGAATAAT
CT0077051      <-- AATATGAGGAGCTTCTTGGAAGGGTGTATAACATTCTTAGGGAGAATAAT
CT0078916      <-- AATATGAGGAGCTTCTTGGAAGGGTGTATAACATTCTTAGGGAGAATAAT
ET0003027      <-- AATATGAGGAGCTTCTTGGAAGGGTGTATAACATTCTTAGGGAGAATAAT
CT0133784      <-- AATATGAGGAGCTTCTTGGAAGGGTGTATAACATTCTTAGGGAGAATAAT
CT0080622      <-- AATATGAGGAGCTTCTTGGAAGGGTGTATAACATTCTTAGGGAGAATAAT
ET0059297      <-- ......AGGAGCTTCTTGGAAGGGTGTATAACATTCTTAGGGAGAATAAT
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               501    -    551
RU03432        --> CCGGAGCTAGCTGGAGACAGGCGTAGGACAGTTATGAGGCCTCCACAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- CCGGAGCTAGCTGGAGACAGGCGCAGGACAGTTAT...............
CT0043151      <-- CCGGAGCTAGCTGGAGACAGGCGCAGGACAGTTAT...............
CT0077051      <-- CCGGAGCTAGCTGGAGACAGGCGCAGGACAGTTAT...............
CT0078916      <-- CCGGAGCTAGCTGGAGACAGGCGCAGGACAGTTATGAGGCCTCCACAAGT
ET0003027      <-- CCGGAGCTAGCTGGAGACAGGCGTAGGACAGTTATGAGGCCTCCACAAGT
CT0133784      <-- CCGGAGCTAGCTGGAGACAGGCGTAGGACAGTTATGAGGCCTCCACAAGT
CT0080622      <-- CCGGAGCTAGCTGGAGACAGGCGTAGGA......................
ET0059297      <-- CCGGAGCTAGCTGGAGACAGGCGCAGGACAGTTATGAGGCCTCCACAAGT
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ......................................GCCTCCACAAGT
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               551    -    601
RU03432        --> TCTACGTGAGGGCACAAAGAAAACTGTCTTTGTGAATTTCATGGATCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- TCTACGTGAGGGCACAAAGAAAACTGTCTTTGTGAATTT...........
ET0003027      <-- TCTACGTGAGGGCACAAAGAAAACTGTCTTTGTGAATTTCATGGATCTGT
CT0133784      <-- TCTACGTGAGGGCACAAAGAAAACTGTCTTTGTGAATTTCATGGATCTGT
CT0080622      <-- ..................................................
ET0059297      <-- TCTACGTGAGGGCACAAAGAAAACTGTCTTTGTGAATTTCATGGATCTGT
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> TCTACGTGAGGGCACAAAGAAAACTGTCTTTGTGAATTTCATGGATCTGT
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               601    -    651
RU03432        --> GCAAGACGATGCATAGGCAACCAGAGCATGTCCAGAATTTCTTGTTGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- GCAAGACGATGCATAGGCAACCAGA.........................
CT0133784      <-- GCAAGACGATGCATAGGCAACCAGAGCATGTCCAGAATTTCTTGTTGGCC
CT0080622      <-- ..................................................
ET0059297      <-- GCAAGACGATGCATAGGCAACCAGAGCATGTCCAGAATTTCTTGTTGGCC
CT0034685      <-- ..AAGACGATGCATAGGCAACCAGAGCATGTCCAGAATTTCTTGTTGGCC
CT0050622      <-- ..AAGACGATGCATAGGCAACCAGAGCATGTCCAGAATTTCTTGTTGGCC
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> GCAAGACGATGCATAGGCAACCAGAGCATGTCCAGAATTTCTTGTTGGCC
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               651    -    701
RU03432        --> GAACTGGGGACAAGTGGATCACTTGATGGACAACAGAGGTTAGTTGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- GAACTGGGGACAAGTGGATCACTTGATGGACAACAGAGGTTAGTTGT...
CT0080622      <-- ..................................................
ET0059297      <-- GAACTGGGGACAAGTGGATCACTTGATGGACAACAGAG............
CT0034685      <-- GAACTGGGGACAAGTGGATCACTTGATGGACAACAGAGGTTAGTTGTCAA
CT0050622      <-- GAACTGGGGACAAGTGGATCACTTGATGGACAACAGAGGTTAGTTGTCAA
CT0048182      <-- ..................................................
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> GAACTGGGGACAAGTGGATCACTTGATGGACAACAGAGGTTAGTTGTCAA
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               701    -    751
RU03432        --> GGGAAGGTTCGCCCCTAAGAATTTTGAAGGGATTCTGCGGCGATATGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- GGGAAGGTTCGCCCCTAAGAATTTTGAAGGGATTCTGCGGCGATATGTCA
CT0050622      <-- GGGAAGGTTCGCCCCTAAGAATTTTGAAGGGATTCTGCGGCGATATGTCA
CT0048182      <-- .......TTCGCCCCTAAGAATTTTGAAGGGATTCTGCGGCGATATGTCA
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> GGGAAGGTTCGCCCCTAAGAATTTTGAAGGGATTCTGCGGCGATATGTCA
CT0050653      --> ..............................................GTCA
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               751    -    801
RU03432        --> ATGAATATGTGATTTGCCTTGGG-TGCAAAAGCCCTGACACTATACTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ATGAATATGTGATTTGCCTTGGG-TGCAAAAGCCCTGACACTATACTGTC
CT0050622      <-- ATGAATATGTGATTTGCCTTGGG-TGCAAAAGCCCTGACACTATACTGTC
CT0048182      <-- ATGAATATGTGATTTGCCTTGGG-TGCAAAAGCCCTGACACTATACTGTC
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ATGAATATGTGATTTGCCTTGGG-TG........................
CT0050653      --> ATGAATATGTGATTTGCCTTGGG-TGCAAAAGCCCTGACACTATACTGTC
CT0072009      --> .......TGTGATTTGCCTTGGGGTGCAAAAGCCCTGACACTATACTGTC
CT0012941      --> ..................................................
CT0092448      --> ..................................................

               801    -    851
RU03432        --> AAAGGAGAATCGCCTGTATTTT-CTCAGATGCGAGAAGTGTGGTTCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- AAAGGAGAATCGCCTGTATTTT-CTCAGATGCGAGAAGTGTGGTTCTGGA
ET0112391      <-- ..................................................
ET0116577      <-- ..................................................
CT0048591      <-- ..................................................
ET0094350      <-- ..................................................
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> AAAGGAGAATCGCCTGTATTTT-CTCAGATGCGAGAAGTGTGGTTCTGGA
CT0072009      --> AAAGGAGAATCGCCTGTATTTTTCTCAGATGCGAGAAGTGTGGTTCTGGA
CT0012941      --> .........................CAGATGCGAGAAGTGTGGTTCTGGA
CT0092448      --> ..................................................

               851    -    901
RU03432        --> CGATCAGTTGCTCAGATCAAACAAGGTTTTGTTGCTCGTGTTGGGCGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- CGA...............................................
ET0112391      <-- ...............ATCAAACAAGGTTTTGTTGCTCGTGTTGGGCGTAG
ET0116577      <-- ...............ATCAAACAAGGTTTTGTTGCTCGTGTTGGGCGTAG
CT0048591      <-- ................TCAAACAAGGTTTTGTTGCTCGTGTTGGGCGTAG
ET0094350      <-- .............................................CGTAG
CT0037884      <-- ..................................................
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> CGATCAGTTGCTCAGATCAAACAAGGTTTTGTTGCTCGTGTTGGGCGTAG
CT0072009      --> CGATCAGTTGCTCAGATCAAA.............................
CT0012941      --> CGATCAGTTGCTCAGATCAAACAAGGTTTTGTTGCTCGTGTTGGGCGTAG
CT0092448      --> ..................................................

               901    -    951
RU03432        --> GAATGCCGGGGCATGATTCTGTTTTGCATTTGGCTTCTGGTTATGCCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- GAATGCCGGGGCATGATTCTGTTTTGCATTTGGCTTCTGGTTATGCCTGC
ET0116577      <-- GAATGCCGGGGCATGATTCTGTTTTGCATTTGGCTTCTGGTTATGCCTGC
CT0048591      <-- GAATGCCGGGGCATGATTCTGTTTTGCATTTGGCTTCTGGTTATGCCTGC
ET0094350      <-- GAATGCCGGGGCATGATTCTGTTTTGCATTTGGCTTCTGGTTATGCCTGC
CT0037884      <-- ..........................CATTTGGCTTCTGGTTATGCCTGC
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> GAATGCCGGGGCATGATTCTGTTTTGCATTTGGCTTCTGGTTATGCCTGC
CT0072009      --> ..................................................
CT0012941      --> GAATGCCGGGGCATGATTCTGTTTTGCATTTGGCTTCTGGTTATGCCTGC
CT0092448      --> .................................................C

               951    -   1001
RU03432        --> TGTGCTGTGTATTAGGAGAAACATGGTTTACTACTAGTTAAATGAATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- TGTGCTGTGTATTAGGAGAAACATGGTTTACTACTAGTTAAATGAATTTT
ET0116577      <-- TGTGCTGTGTATTAGGAGAAACATGGTTTACTACTAGTTAAATGAATTTT
CT0048591      <-- TGTGCTGTGTATTAGGAGAAACATGGTTTACTACTAGTTAAATGAATTTT
ET0094350      <-- TGTGCTGTGTATTAGGAGAAACATGGTTTACTACTAGTTAAATGAATTTT
CT0037884      <-- TGTGCTGTGTATTAGGAGAAACATGGTTTACTACTAGTTAAATGAATTTT
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> TGTGCTGTGTATTAGGAGAAA.............................
CT0072009      --> ..................................................
CT0012941      --> TGTGCTGTGTATTAGGAGAAACATGGTTTACTACTAG.............
CT0092448      --> TGTGCTGTGTATTAGGAGAAACATGGTTTACTACTAGTTAAATGAATTTT

               1001   -   1051
RU03432        --> GGATTGCCTGTTTATTACCCTACCTAGAACAACGGACGGTTGTGATATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- GGATTGCCTGTTTATTACCCTACCTAGAACAACGGACGGTTGTGATATGT
ET0116577      <-- GGATTGCCTGTTTATTACCCTACCTAGAACAACGGACGGTTGTGATATGT
CT0048591      <-- GGATTGCCTGTTTATTACCCTACCTAGAACAACGGACAGTTGTGATATGT
ET0094350      <-- GGATTGCCTGTTTATTACCCTACCTAGAACAACGGACAGTTGTGATATGT
CT0037884      <-- GGATTGCCTGTTTATTACCCTACCTAGAACAACGGACAGTTGTGATATGT
CT0028602      <-- ..................................................
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> GGATTGCCTGTTTATTACCCTACCTAGAACAACGGACAGTTGTGATATGT

               1051   -   1101
RU03432        --> AGACACTGAGGAGATAATTCTGGCTATTTTGCTGTCATATACTCATCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- ..................................................
CT0102144      <-- ..................................................
CT0104616      <-- ..................................................
CT0006243      <-- ..................................................
CT0043151      <-- ..................................................
CT0077051      <-- ..................................................
CT0078916      <-- ..................................................
ET0003027      <-- ..................................................
CT0133784      <-- ..................................................
CT0080622      <-- ..................................................
ET0059297      <-- ..................................................
CT0034685      <-- ..................................................
CT0050622      <-- ..................................................
CT0048182      <-- ..................................................
ET0112391      <-- AGACACTGAGGAGATAATTCTGGCTATTTTGCTGTCATGTACTCATacc.
ET0116577      <-- AGACACTGAGGAGATAATTCTGGCTATTTTGCTGTCATGTACTCATCC..
CT0048591      <-- AGACACTGAGGAGATAATTCTGGCTATTTTGCTGTCATATACTCATCCAT
ET0094350      <-- AGACACTGAGGAGATAATTCTGGCTATTTTGCTGTCATATACTCATCCAT
CT0037884      <-- AGACACTGAGGAGATAATTCTGGCTATTTTGCTGTCAaa...........
CT0028602      <-- ...CACTGAGGAGATAATTCTGGCTATTTTGCTGTCATATACTCATCCAT
RH04C75        --> ..................................................
ET0021174      --> ..................................................
CT0010341      --> ..................................................
CT0025810      --> ..................................................
ET0141021      --> ..................................................
CT0102744      --> ..................................................
CT0050653      --> ..................................................
CT0072009      --> ..................................................
CT0012941      --> ..................................................
CT0092448      --> AGACACTGAGGAGATAATTCTGGCTATTTTGCTGTCATATACTCATCCAT

               1101   -   1151
RU03432        --> TGCTTCGAAGTCCTTTCTTATGTTTGAGTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K136       <-- .................................
CT0102144      <-- .................................
CT0104616      <-- .................................
CT0006243      <-- .................................
CT0043151      <-- .................................
CT0077051      <-- .................................
CT0078916      <-- .................................
ET0003027      <-- .................................
CT0133784      <-- .................................
CT0080622      <-- .................................
ET0059297      <-- .................................
CT0034685      <-- .................................
CT0050622      <-- .................................
CT0048182      <-- .................................
ET0112391      <-- .................................
ET0116577      <-- .................................
CT0048591      <-- TGCTTCG..........................
ET0094350      <-- TGCTTCGAAGTCCTTTCTTATGTTTGAGTTG..
CT0037884      <-- .................................
CT0028602      <-- TGCTTCGAAaaaaaaa.................
RH04C75        --> .................................
ET0021174      --> .................................
CT0010341      --> .................................
CT0025810      --> .................................
ET0141021      --> .................................
CT0102744      --> .................................
CT0050653      --> .................................
CT0072009      --> .................................
CT0012941      --> .................................
CT0092448      --> TGCTTCGAAGTCCTTTCTTATGTTTGAGTTGAG