SNPs of unigene RU03563
               1      -     51
RU03563        --> CTGTGTATAATGGGGCGCCACCGGCCTGACCATGTTACTGGTGAGTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> CTGTGTATAATGGGGCGCCACCGGCCTGACCATGTTACTGGTGAGTCCAT
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               51     -    101
RU03563        --> GGATGAAGGTTTTGGAGCAATAGTTATGAATTGTAAGAAGCTCACCCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> GGATGAAGGTTTTGGAGCAATAGTTATGAATTGTAAGAAGCTCACCCGCC
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               101    -    151
RU03563        --> TCGCTGTGTCTGGTTTACTGACTGATCAAGCTTTCAGTTATATTGGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> TCGCTGTGTCTGGTTTACTGACTGATCAAGCTTTCAGTTATATTGGGCAA
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               151    -    201
RU03563        --> TATGGAAAATTGGTTCGAACTCTCTCAGTTGCCTTTGCTGGTGACAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ...............................................TGA
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> TATGGAAAATTGGTTCGAACTCTCTCAGTTGCCTTTGCTGGTGACAGTGA
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               201    -    251
RU03563        --> CATGGCTCTACAATATTTGCTTGAGGGCTGCCCTAAATTGCAGAAGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- CATGGCTCTACAATATTTGCTTGAGGGCTGCCCTAAATTGCAGAAGCTTG
CT0046945      <-- ..............caacaagTGAGGGCTGCCCTAAATTGCAGAAGCTTG
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> CATGGCTCTACAATATTTGCTTGAGGGCTGCCCTAAATTGCAGAAGCTTG
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               251    -    301
RU03563        --> AAATCCGGGACAGTCCATTTGGGGATTCAGCATTACGCTCTGGCTTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- AAATCCGGGACAGTCCATTTGGGGATTCAGCATTACGCTCTGGCTTGCAT
CT0046945      <-- AAATCCGGGACAGTCCATTTGGGGATTCAGCATTACGCTCTGGCTTGCAT
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> AAATCCGGGACAGTCCATTTGGGGATTCAGCATTACGCTCTGGCTTG...
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               301    -    351
RU03563        --> CACTATTACAACATGAGATTCCTTTGGATGTCATCATGCTTGTTAACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- CACTATTACAACATGAGATTCCTTTGGATGTCATCATGCTTGTTAACTCC
CT0046945      <-- CACTATTACAACATGAGATTCCTTTGGATGTCATCATGCTTGTTAACTCC
CT0065359      <-- ......TACAACATGAGATTCCTTTGGATGTCATCATGCTTGTTAACTCG
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..........................GATGTCATCATGCTTGTTAACTCC
CT0061996      --> .........................gtATGTCATCATGCTTGTTAACTCC
CT0029377      --> .......................gaatagtaCATCATGCTTGTTAACTCC
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               351    -    401
RU03563        --> GCAAGGTTGTCGAGATATTGCTCGAGCACTGCCCCGCCTGGTTGTGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- GCAAGGTTGTCGAGATATTGCTCGAGCACTGCCCCGCCTGGTTGTGGAAG
CT0046945      <-- GCAAGGTTGTCGAGATATTGCTCGAGCACT....................
CT0065359      <-- GCAAGGTTGTCGAGATATTGCTCGAGCACTGCCCCGCCTGGTTGTGGAAG
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> GCAAGGTTGTCGAGATATTGCTCGAGCACTGCCCCGCCTGGTTGTGGAAG
CT0061996      --> GCAAGGTTGTCGAGATATTGCTCGA.........................
CT0029377      --> GCAAGGTTGTCGAGATATTGCTCGAGCACTGCCCCGCCTGGTTGTGGAAG
CT0029577      --> ..........................gaccccgacctaggttaGTGGAAG
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               401    -    451
RU03563        --> TGATTAACAGTGATCAAC-AGGTGGAAACGGGTGAATATGTTGATATACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- TGATTAACAGTtgtattctat.............................
CT0046945      <-- ..................................................
CT0065359      <-- TGATTAACAGTGATCAACCAGGTGGA........................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> TGATTAACAGTGATCAAC-AGGTGGAAACGGGTGAATATGTTGATATACT
CT0061996      --> ..................................................
CT0029377      --> TGATTAACAGTGATCAAC-AGGTGGAAACGGGTGAATATGTTGATATACT
CT0029577      --> TGATTAACAGTGATCAAC-AGGTGGAAACGGGTGAATATGTTGATATACT
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               451    -    501
RU03563        --> ATACATGTACCGATCCCTTGATGGGCAAAGGGATGATATTCCAAAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ATACATGTACCGATCCCTTGATGGGCAAAGGGATGATATT..........
CT0061996      --> ..................................................
CT0029377      --> ATACATGTACCGATCCCTTGATGGGCAAAGGGATGATATT..........
CT0029577      --> ATACATGTACCGATCCCTTGATGGGCAAAGGGATGATATTCCAAAGTTTG
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               501    -    551
RU03563        --> TTGATATCCTGTAGACTTTGCAATTACAAGTTGTTAGAAGTTGTTTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..............ACTTTGCAATTACAAGTTGTTAGAAGTTGTTTCAAC
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> TTGATATCCTGTAGACTTTGCAATTACAAGTTGTTAGAAGTTGTTTCAAC
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               551    -    601
RU03563        --> TATTCTTATGGCGGCATTGGAGCAAGTGAGACACATTTT-ACTGGTGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- TATTCTTATGGCGGCATTGGAGCAAGTGAGACACATTTTTACTGGTGGGA
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> TATTCTTATGGCGGCATTGGAGCAAGTGAGACACATTTT-ACTGGTGGGA
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               601    -    651
RU03563        --> AGTATCCTGTGGGTGACTTTTATATGACCCGCTAGGTGGTTCCTGCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- AGTATCCTGTGGGTGACTTTTATATGACCCGCTAGGTGGTTCCTGCATCG
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> AGTATCCTGTGGGTGACTTTTATATGA.......................
ET0119726      --> ............................................GCATCG
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               651    -    701
RU03563        --> CCAGATGAGCAAAGATGAGTAAACAACTTCTGGTCTTTATTGAGCTTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- CCAGATGAGCAAAGATGAGTAAACAACTTCTGGTCTTTATTGAGCTTAGC
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> CCAGATGAGCAAAGATGAGTAAACAACTTCTGGTCTTTATTGAGCTTAGC
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               701    -    751
RU03563        --> TTTTGCAATGGCAGTCAGATGCCACAGTTGCGAAGGCCATCAGATAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- TTTTGCAATGGCAGTCAGATGCCACAGTTGCGAAGGCCATCAGATAAa..
CT0012624      <-- .........................................AGATAAGCA
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> TTTTGCAATGGCAGTCAGATGCCACAGTTGCGAAGGCCATCAGATAAGCA
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               751    -    801
RU03563        --> TTGCAGACCACATTTCTTCTTCTTTGGTTCTTCCGAGTTCTTTGGAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- TTGCAGACCACATTTCTTCTTCTTTGGTTCTTCCGAGTTCTTTGGAGGAT
CT0036028      <-- .............TTCTTCTTCTTTGGTTCTTCCGAGTTCTTTGGAGGAT
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> TTGCAGACCACATTTCTTCTTCTTTGGTTCTTCCGAGTTCTTTGGAGGAT
ET0137386      --> ...............CTTCTTCTTTGGTTCTTCCGAGTTCTTTGGAGGAT
ET0072808      --> .................................................T
ET0101247      --> ................................................tg
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               801    -    851
RU03563        --> GGGGTGCTGATGCTGAGGATTAATGTCTGCGAGGTATTGGATTACCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- GGGGTGCTGATGCTGAGGATTAATGTCTGCGAGGTATTGGATTACCATCA
CT0036028      <-- GGGGTGCTGATGCTGAGGATTAATGTCTGCGAGGTATTGGATTACCATCA
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> GGGGTGCTGATGCTGAGGATTAATGTCTGCGAGGTATTGGATTACCATCA
ET0137386      --> GGGGTGCTGATGCTGAGGATTAATGTCTGCGAGGTATTGGATTACCATCA
ET0072808      --> GGGGTGCTGATGCTGAGGATTAATGTCTGCGAGGTATTGGATTACCATCA
ET0101247      --> GGGGTGCTGATGCTGAGGATTAATGTCTGCGAGGTATTGGATTACCATCA
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               851    -    901
RU03563        --> TCGAATGTTTGTATTGGTACACTTCTAAATTTCATGTTTGTTTTTGTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- TCGAATGTTTGTATTGGTACACTTCTAA......................
CT0036028      <-- TCGAATGTTTGTATTGGTACACTTCTAAATTTCATGTTTGTTTTTGTTCC
CT0036689      <-- .................TACACTTCTAAATTTCATGTTTGTTTTTGTTCC
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> TCGAATGTTTGTA.....................................
ET0137386      --> TCGAATGTTTGTATTGGTACACTTCTAAATTTCATGTTTGTTTTTGTTCC
ET0072808      --> TCGAATGTTTGTATTGGTACACTTCTAAATTTCATGTTTGTTTTTGTTCC
ET0101247      --> TCGAATGTTTGTATTGGTACACTTCTAAATTTCATGTTTGTTTTTGTTCC
CT0000613      --> ..................................................
CT0042947      --> ..................................................

               901    -    951
RU03563        --> ATATTCATTTGATCATAAACAACGGCTGCCAGAGGCGAAGGGAGGGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ATATTCATTTGATCATAAACAACGGCTGCCA...................
CT0036689      <-- ATATTCATTTGATCATAAACAACGGCTGCCAGAGGCGAAGGGAGGGTTTT
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ATATTCATTTGATCATAAACAACGGCTGCCAGAGGCGAAGGGAGGGTTTT
ET0072808      --> ATATTCATTTGATCATAAACAACGGCTGCCAGAGGCGAAGGGAGGGTTTT
ET0101247      --> ATATTCATTTGATCATAAACAACGGCTGCCAGAGGCGAAGGGAGGGTTTT
CT0000613      --> ...........................................GGGTTTT
CT0042947      --> ..................................................

               951    -   1001
RU03563        --> CGAGCTGATCATGAAATTTTCACGTTCTCAAGCAAACCATACTGTTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- CGAGCTGATCATGAAATTTTCACGTTCTCAAGCAAACCATACTGTTTATC
CT0079769      <-- ..................................................
ET0041766      <-- ..................................................
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> CGAGCTGATCATGAAATTTTCACGTTCTCAAGCAAACCATACTGTTCATC
ET0072808      --> CGAGCTGATCATGAAATTTTCACGTTCTCAAGCAAACCATACTGTTTATC
ET0101247      --> CGAGCTGATCATGAAATTTTCACGTTCTCAAGCAAACCATACTGTTTATC
CT0000613      --> CGAGCTGATCATGAAATTTTCACGTTCTCAAGCAAACCATACTGTTTATC
CT0042947      --> ..................................................

               1001   -   1051
RU03563        --> TCTTCTTGAGCAAATTGGAAGTGGACAATCTGACAGGTGAAAATTTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................  Ethylene
CT0046945      <-- ..................................................  Control
CT0065359      <-- ..................................................  Control
CT0114856      <-- ..................................................  Control
CT0012624      <-- ..................................................  Control
CT0036028      <-- ..................................................  Control
CT0036689      <-- TCTTCTTGAGCAAATTGGGAGTGGACAATCTGACAGGTGAAAATTTCCAC  Control
CT0079769      <-- ..................................................  Control
ET0041766      <-- ..................................................  Ethylene
CT0085927      <-- ..................................................  Control
CT0098738      <-- ..................................................  Control
ET0143954      --> ..................................................  Ethylene
CT0014199      --> ..................................................  Control
CT0061996      --> ..................................................  Control
CT0029377      --> ..................................................  Control
CT0029577      --> ..................................................  Control
ET0119726      --> ..................................................  Ethylene
ET0137386      --> TCTT..............................................  Ethylene
ET0072808      --> TCTTCTTGAGCAAATCGGAAGTGGACAATCTGACAGG.............  Ethylene
ET0101247      --> TCTTCTTGAGCAAATCGGAAGTGGACAATCTGACAGG.............  Ethylene
CT0000613      --> TCTTCTTGAGCAAATTGGAAGTGGACAATCTGACAGGTGAAAATTTCCAC  Control
CT0042947      --> ..................................................  Control

               1051   -   1101
RU03563        --> ATCCCTCGCCTGTGCCGCCAGTAGAGAAGTAAAGGGAAGAGAGCTTAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ........................AGAAGTAAAGGGAAGAGAGCTTAGTC
ET0041766      <-- ..................................GGAAGAGAGCTTAGTC
CT0085927      <-- ..................................................
CT0098738      <-- ..................................................
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ATCCCTCGCCTGTGCCGCCAGTAGAGAAGTAAAGGGAAGAGAGCTTAGTC
CT0042947      --> ..................................................

               1101   -   1151
RU03563        --> TGTTTATTTT-G-ATTCAAATGGTAGTTT-AGTTTTTAAG-CTGTAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- TGTTTATTTT-G-ATTCAAATGGTAGTTTTAGTTTTTAAG-CTGTAACTG
ET0041766      <-- TGTTTATTTTTGTATTCAAATGGTAGTTT-AGTTTTTAAGTCTGTAACTG
CT0085927      <-- .................AAATGGTAGTTTTAGTTTTTAAG-CTGTAACTG
CT0098738      <-- .................AAATGGTAGTTTTAGTTTTTAAG-CTGTAACTG
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> TGTTTATTTT-G-ATTCAAATGGTAGTTTTAGTTTTTAAG-CTGTAACTG
CT0042947      --> ..................................................

               1151   -   1201
RU03563        --> GTGAGATCTAAGTGCCTTAGACTGATACATCTCTGTGTTTCTCTATCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- GTGAGATCTAAGTGCCTTAGACTGATACATCGCTGTGTTTCTCTATCTCT
ET0041766      <-- GTGAGATCTAAGTGCCTTAGACTGATACATCTCTGTGTTTCTCTATCTCT
CT0085927      <-- GTGAGATCTAAGTGCCTTAGACTGATACATCGCTGTGTTTCTCTATCTCT
CT0098738      <-- GTGAGATCTAAGTGCCTTAGACTGATACATCGCTGTGTTTCTCTATCTCT
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> GTGAGA............................................
CT0042947      --> ...............................................ttt

               1201   -   1251
RU03563        --> CTTTT-CCCAAGTGTTTGTTTCTTTCGGTTTCAGATGTGTTGTTGTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- CTTTT-CCCAAGTGTTTGTTTCTTTCAGTTTCAGATGTGTTGTTGT....
ET0041766      <-- CTTTTTCCCAAGTGTTTGTTTCTTTCGGTTTCAGATGTGTTGTTGTAGCA
CT0085927      <-- CTTTT-CCCAAGTGTTTGTTTCTTTCAGTTTCAGATGTGTTGTTGTAGCA
CT0098738      <-- CTTTT-CCCAAGTGTTTGTTTCTTTCAGTTTCAGATGTGTTGTTGTAGCA
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> tTTTT-CCCAAGTGTTTGTTTCTTTCAGTTTCAGATGTGTTGTTGTAGCA

               1251   -   1301
RU03563        --> CCTGACTGTTGAATTTATTATTGTTATTGTTAGCAAATGCAAATGTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- CCTGACTGTTGAATTTATTATTGTTATTGTTAGCAAATGCAAATGTGAGA
CT0085927      <-- CCTGACTGTTGAATTTATTATTGTTATTGTTAGCAAATGCAAATGTGAGA
CT0098738      <-- CCTGACTGTTGAATTTATTATTGTTATTGTTAGCAAATGCAAATGTGAGA
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> CCTGACTGTTGAATTTATTATTGTTATTGTTAGCAAATGCAAATGTGAGA

               1301   -   1351
RU03563        --> TGGGTAATAAATGCCAAAATTTGCATGGACCATGTTGTACCATTGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..................................................
CT0046945      <-- ..................................................
CT0065359      <-- ..................................................
CT0114856      <-- ..................................................
CT0012624      <-- ..................................................
CT0036028      <-- ..................................................
CT0036689      <-- ..................................................
CT0079769      <-- ..................................................
ET0041766      <-- TGGGTAATAAATGCCAAAATTTGC..........................
CT0085927      <-- TGGGTAATAAATGCCAAAATTTGCATGGACCATGTTGTACCATTGATTTT
CT0098738      <-- TGGGTAATAAATGCCAAAATTTGCATGGACCATGTTGTACCATTGATTTT
ET0143954      --> ..................................................
CT0014199      --> ..................................................
CT0061996      --> ..................................................
CT0029377      --> ..................................................
CT0029577      --> ..................................................
ET0119726      --> ..................................................
ET0137386      --> ..................................................
ET0072808      --> ..................................................
ET0101247      --> ..................................................
CT0000613      --> ..................................................
CT0042947      --> TGGGTAATAAATGCCAAAATTTGac.........................

               1351   -   1401
RU03563        --> ATTTTATTTTTGTTT-GTTTTTTAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0112136      <-- ..............................
CT0046945      <-- ..............................
CT0065359      <-- ..............................
CT0114856      <-- ..............................
CT0012624      <-- ..............................
CT0036028      <-- ..............................
CT0036689      <-- ..............................
CT0079769      <-- ..............................
ET0041766      <-- ..............................
CT0085927      <-- ATTTTATTTTTGTTTTGTCTTTTAAAAAAA
CT0098738      <-- ATTTTATTTTTGTTT-GTTCTTTAAAAAAA
ET0143954      --> ..............................
CT0014199      --> ..............................
CT0061996      --> ..............................
CT0029377      --> ..............................
CT0029577      --> ..............................
ET0119726      --> ..............................
ET0137386      --> ..............................
ET0072808      --> ..............................
ET0101247      --> ..............................
CT0000613      --> ..............................
CT0042947      --> ..............................