1 - 51
RU04042 --> GATAGGATGGTACCCCATCAGACTCAGTTTCCATACCCATGTCTGCTTCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ..................................................
CT0048339 <-- ..................................................
CT0102705 <-- ..................................................
ET0145801 <-- ..................................................
CT0031795 --> GATAGGATGGTACCCCATCAGACTCAGTTTCCATACCCATGTCTGCTTCT
CT0025018 --> ..................................................
ET0109648 --> ..................................................
ET0102046 --> ..................................................
ET0116305 --> ..................................................
51 - 101
RU04042 --> AGAGCATCCAACTCACCCATAAGTTCCTCCTCATCAATGTCATCAGGAAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ....CATCCAACTCACCCATAAGTTCCTCCTCATCAATGTCATCAGGAAC
CT0048339 <-- .....ATCCAACTCACCCATAAGTTCCTCCTCATCAATGTCATCAGGAAC
CT0102705 <-- ..................................................
ET0145801 <-- ..................................................
CT0031795 --> AGAGCATCCAACTCACCCATAAGTTCCTCCTCATCAATGTCATCAGGAAC
CT0025018 --> .....ATCCAACTCACCCATAAGTTCCTCCTCATCAATGTCATCAGGAAC
ET0109648 --> ...........................TCCTCATCAATGTCATCAGGAAC
ET0102046 --> ..................................................
ET0116305 --> ..................................................
101 - 151
RU04042 --> ACTATAGCTTCTACCAAGCGTCTCTTGAATTT---TACTTACATCCATCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ACTATAGCTTCTACCAAGCGTCTCTTGAATTTCATTACTTACATCCATCA Control
CT0048339 <-- ACTATAGCTTCTACCAAGCGTCTCTTGAATTTCATTACTTACATCCATCA Control
CT0102705 <-- .................................................. Control
ET0145801 <-- .................................................. Ethylene
CT0031795 --> ACTATAGCTTCTACCAAGCGTCTCTTGAATTTCATTACTTACATCCATCA Control
CT0025018 --> ACTATAGCTTCTACCAAGCGTCTCTTGAATTTCATTACTTACATCCATCA Control
ET0109648 --> ACTATAGCTTCTACCAAGCGTCTCTTGAATTT---TACTTACATCCATCA Ethylene
ET0102046 --> ..cctaagtcgttcttctttgtaattttcaTT---TACTTACATCCATCA Ethylene
ET0116305 --> .................................................. Ethylene
151 - 201
RU04042 --> GGTCCATCATCTCATCTTGCAAATTATCAATATCTTGAATCTTAACAGTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- GGTCCATCATCTCATCTTGCAAATTATCAATATCTTGAATCTTAACAGTT
CT0048339 <-- GGTCCATCATCTCATCTTGCAAATTATCAATATCTTGAATCTTAACAGTT
CT0102705 <-- ..................................................
ET0145801 <-- ..................................................
CT0031795 --> GGTCCATCATCTCATCTTGCAAATTATCAATA..................
CT0025018 --> GGTCCATCATCTCATCTTGCAAATTATCAATATCTTGAATCTTAACAG..
ET0109648 --> GGTCCATCATCTCATCTTGCAAATTATCAATATCTTGAATCTTAACAGTT
ET0102046 --> GGTCCATCATCTCATCTTGCAAATTATCAATATCTTGAATCTTAACAGTT
ET0116305 --> ..................................................
201 - 251
RU04042 --> TTCATCATTCCTTTCAATTCCTTGTTGGCAGATTTCAGAGCTGTCATTGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- TTCA..............................................
CT0048339 <-- TTCA..............................................
CT0102705 <-- ..................................................
ET0145801 <-- ..................................................
CT0031795 --> ..................................................
CT0025018 --> ..................................................
ET0109648 --> TTCATCATTCCTTTCAATTCCTTGTTGGCAGATTTCAGAGCTGTCATTGT
ET0102046 --> TTCATCATTCCTTTCAATTCCTTGTTGGCAGATTTCAGAGCTGTCATTGT
ET0116305 --> .....................TTGTTGGCAGATTTCAGAGCTGTCATTGT
251 - 301
RU04042 --> TTGCTGAGCATCTTTGATACCCTCTGAAGCAAACGCAACTTGATCGAGGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ..................................................
CT0048339 <-- ..................................................
CT0102705 <-- ..................................................
ET0145801 <-- ..................................................
CT0031795 --> ..................................................
CT0025018 --> ..................................................
ET0109648 --> TTGCTGAGCATCTTTGATACCCTCTGAAGCAAACGCAACTTGATCGAagg
ET0102046 --> TTGCTGAGCATCTTTGATACCCTCTGAAGCAAACGCAACTTGATCGAGGT
ET0116305 --> TTGCTGAGCATCTTTGATACCCTCTGAAGCAAACGCAACTTGATCGAGGT
301 - 351
RU04042 --> TAAATGTCTGATTATAGAGCATGTCACGTTGTCCTTCATACATTCGCTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ..................................................
CT0048339 <-- ..................................................
CT0102705 <-- ..............TAGAGCATGTCACGTTGTCCTTCATACATTCGCTTT
ET0145801 <-- ..................................................
CT0031795 --> ..................................................
CT0025018 --> ..................................................
ET0109648 --> ..................................................
ET0102046 --> TAAATGTCTGAT-ATAGAGCATGTCAC.......................
ET0116305 --> TAAATGTCTGATTATAGAGCATGTCACGTTGTCCTTCATACATTCGCTTT
351 - 401
RU04042 --> TGCTTGAGAACCCTCATGGCTCTGGACTTAACAGCTTCCTGAGCAGGGCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ..................................................
CT0048339 <-- ..................................................
CT0102705 <-- TGCTTGAGAACCCTCATGGCTCTGGACTTAACAGCTTCCTGAGCAGGGCC
ET0145801 <-- .....................CTGGACTTAACAGCTTCCTGAGCAGGGCC
CT0031795 --> ..................................................
CT0025018 --> ..................................................
ET0109648 --> ..................................................
ET0102046 --> ..................................................
ET0116305 --> TGCTTGAGAACCCTCATGGCTCTGGACTTAACAGCTTCCTGAGCAGGGCC
401 - 451
RU04042 --> AGGCCTTGTCTTCTTGATCTGCTCTTTGTATCTATTGAGTTCAACATCAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ..................................................
CT0048339 <-- ..................................................
CT0102705 <-- AGGCCTTGTCTTCTTGATCTGCTCTTTGTATCTATTGAGTTCAACATCAA
ET0145801 <-- AGGCCTTGTCTTCTTGATCTGCTCTTTGTATCTATTGAGTTCAACATCAA
CT0031795 --> ..................................................
CT0025018 --> ..................................................
ET0109648 --> ..................................................
ET0102046 --> ..................................................
ET0116305 --> AGGCCTTGTCTTCTTGATCTGCTCTTTGTATCTA................
451 - 501
RU04042 --> GCTTCTTGATCTTCTCATCTACTGTATCGCCTCTTTTATTAATCCTATCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ..................................................
CT0048339 <-- ..................................................
CT0102705 <-- GCTTCTTGATCTTCTCATCTACTGTATCGCCTCTTTTAGTAATCCTATCG
ET0145801 <-- GCTTCTTGATCTTCTCATCTACTGTATCGCCTCTTTTATTAATCCTATCG
CT0031795 --> ..................................................
CT0025018 --> ..................................................
ET0109648 --> ..................................................
ET0102046 --> ..................................................
ET0116305 --> ..................................................
501 - 551
RU04042 --> GAGGCATCTCCAACAGAAGGAGGAGGCTCTTTGTCTTTCTTGGCACCGAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ..................................................
CT0048339 <-- ..................................................
CT0102705 <-- GAGGCATCTCCAACAGAAGGAGGAGGCTCTTTGTCTT.............
ET0145801 <-- GAGGCATCTCCAACAGAAGGAGGAGGCTCTTTGTCTTTCTTGGCACCGAA
CT0031795 --> ..................................................
CT0025018 --> ..................................................
ET0109648 --> ..................................................
ET0102046 --> ..................................................
ET0116305 --> ..................................................
551 - 601
RU04042 --> TACCCTCTTCATCTGATCTTCTTCTTCTTCTTCTGCCTTCAACGATTTAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ..................................................
CT0048339 <-- ..................................................
CT0102705 <-- ..................................................
ET0145801 <-- TACCCTCTTCATCTGATCTTCTTCTTCTTCTTCTGCCTTCAACGATTTAG
CT0031795 --> ..................................................
CT0025018 --> ..................................................
ET0109648 --> ..................................................
ET0102046 --> ..................................................
ET0116305 --> ..................................................
601 - 651
RU04042 --> CCCTAGATAGCTGCTACCTCCGATCTCGATACACTCTGATTTTTTTTGTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037716 <-- ..................................................
CT0048339 <-- ..................................................
CT0102705 <-- ..................................................
ET0145801 <-- CCCTAGATAGCTGCTACCTCCGATCTCGATACACTCTGATTTTTTTTGTT
CT0031795 --> ..................................................
CT0025018 --> ..................................................
ET0109648 --> ..................................................
ET0102046 --> ..................................................
ET0116305 --> ..................................................
651 - 701
RU04042 --> CTTTC
~~~~~
CT0037716 <-- .....
CT0048339 <-- .....
CT0102705 <-- .....
ET0145801 <-- CTTTC
CT0031795 --> .....
CT0025018 --> .....
ET0109648 --> .....
ET0102046 --> .....
ET0116305 --> .....
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