SNPs of unigene RU04451
               1      -     51
RU04451        --> CCTACCATTTGTTAAGGAATTGTCAACAGATTCATCCCAGCATGTTCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- CCTACCATTTGTTAAGGAATTGTCAACAGATTCATCCCAGCATGTTCGCT
CT0030268      <-- ..................................................
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               51     -    101
RU04451        --> CTGCATTGGCTTCAGTGATAATGGGAATGGCACCAGTTTTAGG-AAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- CTGCATTGGCTTCAGTGATAATGGGAATGGCACCAGTTTTAGG-AAAGGA
CT0030268      <-- .................................CAGTTTTAGGTAAAGGA
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ...............................ACCAGTTTTAGG-AAAGGA
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               101    -    151
RU04451        --> TGCAACCATAGAGCAACTGCTGCCTATTTTCCTTTCTCTTCTCAAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- TGCAACCATAGAGCAACTGCTGCCTATTTTCCTTTCTCTTCTCAAAGATG
CT0030268      <-- TGCAACCATAGAGCAACTGCTGCCTATTTTCCTTTCTCTTCTCAAAGATG
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> TGCAACCATAGAGCAACTGCTGCCTATTTTCCTTTCTCTTCTCAAAGATG
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               151    -    201
RU04451        --> AGTTTCCAGATGTCCGGCTGAACATTATTAGCAAGCTTGATCAAGTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- AGTTTCCAGATGTCCGGCTGAACATTATTAGCAAGCTTGATCAAGTCAAC
CT0030268      <-- AGTTTCCAGATGTCCGGCTGAACATTATTAGCAAGCTTGATCAAGTCAAC
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> AGTTTCCAGATGTCCGGCTGAACATTATTAGCAAGCTTGATCAAGTCAAC
CT0043524      --> ...........GTCCGGCTGAACATTATCAGCAAGCTTGATCAAGTCAAC
CT0052426      --> ...........GTCCGGCTGAACATTATCAGCAAGCTTGATCAAGTCAAC
CT0052497      --> ...........GTCCGGCTGAACATTATCAGCAAGCTTGATCAAGTCAAC
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               201    -    251
RU04451        --> CAGGTAATTGGAATTGATCTGTTGTCCCAGTCTCTACTGCCAGCAATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- CAGGTAATTGGAATTGATCTGCTGTCCCAGTCTCTACTGCCAGCAATTGT
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> CAGGTAATTGGAATTGATCTGCTGTCCCAGTCTCTACTGCCAGCAATTGT
CT0043524      --> CAGGTAATTGGAATTGATCTGTTGTCCCAGTCTCTACTGCCAGCAATTGT
CT0052426      --> CAGGTAATTGGAATTGATCTGTTGTCCCAGTCTCTACTGCCAGCAATTGT
CT0052497      --> CAGGTAATTGGAATTGATCTGTTGTCCCAGTCTCTACTGCCAGCAATTGT
CT0032290      --> ........................TCCCAGTCTCTACTGCCAGCAATTGT
ET0014742      --> .........................CCCAGTCTCTACTGCCAGCAATTGT
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               251    -    301
RU04451        --> GGAACTGGCAGAGGATAGACATTGGAGGGTTCGGCTTGCGATAATAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- GGAACTGGCAGAGGATAGACATTGGAGGGTTCGGCTTGCGATAATAGA..
ET0104722      <-- .............................................AGAAT
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> GGAACTGGCAGAGGATAGACATTGGAGGGTTCGGCTTGCGATAATAGAAT
CT0043524      --> GGAACTGGCAGAGGATAGACATTGGAGGGTTCGGCTTGCAATAATAGAAT
CT0052426      --> GGAACTGGCAGAGGATAGACATTGGAGGGTTCGGCTTGCAATAATAGAAT
CT0052497      --> GGAACTGGCAGAGGATAGACATTGGAGGGTTCGGCTTGCAATAATAGAAT
CT0032290      --> GGAACTGGCAGAGGATAGACATTGGAGGGTTCGGCTTGCGATAATAGAAT
ET0014742      --> GGAACTGGCAGAGGATAGACATTGGAGGGTTCGGCTTGCGATAATAGAAT
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               301    -    351
RU04451        --> ATATCCCTTTATTGG-CAAGTCAGTTGGGTGTGGGGTTTTTTGATGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- ATATCCCTTTATTGGTCAAGTCAGTTGGGTGTGGGGTTTTTTGATGATAA
ET0039546      <-- .......TTTATTGG-CAAGTCAGTTGGGTGTGGGGTTTTTCGATGATAA
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ATATCCCTTTATTGG...................................
CT0043524      --> ATATCCCTTTATTGG-CAAGTCAGTTGGGTGTGGGGTTTTTTGATGATAA
CT0052426      --> ATATCCCTTTATTGG-CAAGTCAGTTGGGTGTGGGGTTTTTTGATGATAA
CT0052497      --> ATATCCCTTTATTGG-CAAGTCAGTTGGGTGTGGGGTTTTT-GATGATAA
CT0032290      --> ATATCCCTTTATTGG-CAAGTCAGTTGGGTGTGGGGTTTTTTGATGATAA
ET0014742      --> ATATCCCTTTATTGG-CAAGTCAGTTGGGTGTGGGGTTTTTTGATGATAA
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               351    -    401
RU04451        --> GCTTGGTTCTCTTTGCATGCAGTGGTTAAATGATAAGGTTTACTCAATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- GCTTGGTTCTCTTTGCATGCAGTGGTTAAATGATAAGGTTTACTCAATAC
ET0039546      <-- GCTTGGTTCTCTTTGCATGCAGTGGTTAAATGATAAGGTTTACTCAATAC
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> GCTTGGTTCTCTTTGCATGCAGTGGTTAAATGATAAGGTTTACTCAATAC
CT0052426      --> GCTTGGTTCTCTTTGCATGCAGTGGTTAAATGATAAGGTTTACTCAATAC
CT0052497      --> GCTTGGTTCTCTTTGCATGCAGTGGTTAAATGATAAGGTTTACTCAATAC
CT0032290      --> GCTTGGTTCTCTTTGCATGCAGTGGTTA......................
ET0014742      --> GCTTGGTTCTCTTTGCATGCAGTGGTT.......................
ET0122368      --> ............................................CAATAC
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               401    -    451
RU04451        --> GTGATGCAGCTGCTAATAATGTGAAGCGCCTTGCAGAAGAATTTGGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- GTGATGCAGCTGCTAATAATGTGAAGCGCCTTGCAGAAGAATTTGGTCCT
ET0039546      <-- GTGATGCAGCTGCTAATAATGTGAAGCGCCTTGCAGAAGAATTTGGCCCT
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> G.................................................
CT0052426      --> G.................................................
CT0052497      --> G.................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> GTGATGCAGCTGCTAATAATGTGAAGCGCCTTGCAGAAGAATTTGGTCCT
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               451    -    501
RU04451        --> GATTGGGCCATGCAGCATATAGTCCCACAGGTTTTGGAAATGATTAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- GATTGGGCCATGCAGCATATAGTCCCACAGGTTTTGGAAATGATTAACAA
ET0039546      <-- GATTGGGCCATGCAGCATATAGTCCCACAGGTTTTGGAAATGATTAACAA
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> GATTGGGCCATGCAGCATATAGTCCCACAGGTTTTGGAAATGATTAACAA
CT0005964      --> ............CAGCATATAGTCCCACAGGTTTTGGAAATGATTAACAA
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               501    -    551
RU04451        --> CCCTCACTATTTGTATCGGATGACCATTCTACATGCAATTTCCCTACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- CCCTCACTATTTGTATCGGATGACCATTCTAC..................
ET0039546      <-- CCCTCACTATTTGTATCGGATGACCATTCTACATGCAATTTCC.......
CT0010529      <-- ..................................................
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> CCCTCACTATTTGTATCGGATGACCATTCTACATGCAATTTCCCTACTTG
CT0005964      --> CCCTCACTATTTGTATCGGATGACCATTCTACATGCAATTTCCCTACTTG
CT0090994      --> ................................................TG
CT0093161      --> ................................................TG
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               551    -    601
RU04451        --> CCCCTGTTATGGGATCAGAAATTACTTGTTCCAAACTTCTACCGGTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- .............ATCAGAAATTACTTGTTCCAAACTTCTACCGGTGGTT
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> CCCCTGTTATGGGATCAGAAATTACTTGTTCCAAACTTCTACCGGTGGTT
CT0005964      --> GCCCTGTTATGGGATCAGAAATTACTTGTTCCAAACTTCTACCGGTGGTT
CT0090994      --> CCCCTGTTATGGGATCAGAAATTACTTGTTCCAAACTTCTACCGGTGGTT
CT0093161      --> CCCCTGTTATGGGATCAGAAATTACTTGTTCCAAACTTCTACCGGTGGTT
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               601    -    651
RU04451        --> ATCACTGCATCAAAAGATAGGGTTCCAAACATCAAGTTCAATGTCGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ATCACTGCATCAAAAGATAGGGTTCCAAACATCAAGTTCAATGTCGCCAA
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ATCACTGCATCAAAAGATAGGGTTCCAAACAT..................
CT0005964      --> ATCACTGCATCAAAAGATAGGGTTCCAAACAT..................
CT0090994      --> ATCACTGCATCAAAAGATAGGGTTCCAAACATCAAGTTCAATGTCGCCAA
CT0093161      --> ATCACTGCATCAAAAGATAGGGTTCCAAACATCAAGTTCAATGTCGCCAA
RH04C31        --> ...................................GTTCAATGTCGCCAA
ET0028931      --> .............................................GCCAA

               651    -    701
RU04451        --> GGTGTTGCAGTCACTTATTCCTATAGTTGATCAATCTGTGGTGGAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- GGTGTTGCAGTCACTTATTCCTATAGTTGATCAATCTGTGGTGGAGAAGA
ET0052397      <-- ..................................................
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> GGTGTTGCAGTCACTTATTCCTATAGTTGATCAATCTGTGGTGGAGAAGA
CT0093161      --> GGTGTTGCAGTCACTTATTCCTATAGTTGATCAATCTGTGGTGGAGAAGA
RH04C31        --> GGTGTTGCAGTCACTTATTCCTATAGTTGATCAATCTGTGGTGGAGAAGA
ET0028931      --> GGTGTTGCAGTCACTTATTCCTATAGTTGATCAATCTGTGGTGGAGAAGA

               701    -    751
RU04451        --> TGATTCGTCCCTGTTTGGTTGAGCTCAGTGAAGATCCAGACGTTGATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- TGATTCG...........................................
ET0052397      <-- ..............................AAGATCCAGACGTTGATGTA
ET0047022      <-- ..................................................
ET0035327      <-- ..................................................
ET0050418      <-- ..................................................
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> TGATTCGTCCCTGTTTGGTTGAGCTCAGTGAAGATCCAGACGTTGATGTA
CT0093161      --> TGATTCGTCCCTGTTTGGTTGAGCTCAGTGAAGATCCAGACGTTGATGTA
RH04C31        --> TGATTCGTCCCTGTTTGGTTGAGCTCAGTGAAGATCCAGACGTTGATGTA
ET0028931      --> TGATTCGTCCCTGTTTGGTTGAGCTCAGTGAAGATCCAGACGTTGATGTA

               751    -    801
RU04451        --> AGATCTTTTGCGACCC-AAGCACTACAGTCAAGTGACGTCATGATGTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................  Ethylene
CT0030268      <-- ..................................................  Control
ET0104722      <-- ..................................................  Ethylene
ET0039546      <-- ..................................................  Ethylene
CT0010529      <-- ..................................................  Control
ET0052397      <-- AGATCTTTTGCGACCCCAAGCACTACAGTCAAGTGACGTCATGATGTCTA  Ethylene
ET0047022      <-- ..........CGACCC-AGGCACTACAGTCAAGTGACGTCATGATGTCTA  Ethylene
ET0035327      <-- ...........GACCC-AGGCACTACAGTCAAGTGACGTCATGATGTCTA  Ethylene
ET0050418      <-- ............ACCC-AGGCACTACAGTCAAGTGACGTCATGATGTCTA  Ethylene
CT0019385      <-- ..................................................  Control
CT0043619      <-- ..................................................  Control
ET0038840      <-- ..................................................  Ethylene
ET0134550      --> ..................................................  Ethylene
CT0043524      --> ..................................................  Control
CT0052426      --> ..................................................  Control
CT0052497      --> ..................................................  Control
CT0032290      --> ..................................................  Control
ET0014742      --> ..................................................  Ethylene
ET0122368      --> ..................................................  Ethylene
CT0005964      --> ..................................................  Control
CT0090994      --> AGATCTTTTGCGACCC-AAGCGCTACAGTCAAGTGACG............  Control
CT0093161      --> AGATCTTTTGCGACCC-AAGCGCTACAGTCAAGTGACG............  Control
RH04C31        --> AGATCTTTTGCGACCC-AAGCGCTACAGTCAAGTGACGTCATGATGTCTA  WaterDS
ET0028931      --> AGATCTTTTGCGACCC-AAGCACTACAGTCAAGTGACGTCATGATGTCTA  Ethylene

               801    -    851
RU04451        --> ACTAGTGAGATATTGTCCTTAGATTCTATATTGTTCAAAGTTTTACCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- ACTAGTGAGATATTGTCCTTAGATTCTATATTGTTCAAAGTTTTACCTTA
ET0047022      <-- ACTAGTGAGATATTGTCCTTAGATTCTATATTGTTCAAAGTTTTACCTTA
ET0035327      <-- ACTAGTGAGATATTGTCCTTAGATTCTATATTGTTCAAAGTTTTACCTTA
ET0050418      <-- ACTAGTGAGATATTGTCCTTAGATTCTATATTGTTCAAAGTTTTACCTTA
CT0019385      <-- ..................................................
CT0043619      <-- ..................................................
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ACTAGTGAGATATTGTCCTTAGATTCTATATTGTTCAAAGTTTTACCTTA
ET0028931      --> ACTAGTGAGATATTGTCCTTAGATTCTATATTGTTCAAAGTTTTACCTTA

               851    -    901
RU04451        --> TTTCTTTTTGTTCCCTTTGTATGTTGAGTACAATTCTCTCCTGTATCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- TTTCTTTTTGTTCCCTTTGTATGTTGAGTACAATTCTCTCCTGTATCTAA
ET0047022      <-- TTTCTTTTTGTTCCCTTTGTATGTTGAGTACAATTCTCTCCTGTATCTAA
ET0035327      <-- TTTCTTTTTGTTCCCTTTGTATGTTGAGTACAATTCTCTCCTGTATCTAA
ET0050418      <-- TTTCTTTTTGTTCCCTTTGTATGTTGAGTACAATTCTCTCCTGTATCTAA
CT0019385      <-- ..................GTATGTTGAGTACAATTCTCTCCTGTATCTAA
CT0043619      <-- ..................GTATGTTGAGTACAATTCTCTCCTGTATCTAA
ET0038840      <-- ..................................................
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> TTTCTTTTTGTTCCCTT-GTATGTTGAGT.....................
ET0028931      --> TTTCTTTTTGTTCCCTTTGTATGTTGAGTACAATT...............

               901    -    951
RU04451        --> TGTCTTACTTGAGACGCAGAGGTTCTGTGGTCCACTTAGCAATTTGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- TGTCTTACTTGAGACGCAGAGGTTCTGTGGTCCACTTAGCAATTTGTCAT
ET0047022      <-- TGTCTTACTTGAGACGCAGAGGTTCTGTGGTCCACTTAGCAATTTGTCAT
ET0035327      <-- TGTCTTACTTGAGACGCAGAGGTTCTGTGGTCCACTTAGCAATTTGTCAT
ET0050418      <-- TGTCTTACTTGAGACGCAGAGGTTCTGTGGTCCACTTAGCAATTTGTCAT
CT0019385      <-- TGTCTTACTTGAGACGCAGAGGTTCTGTGGTCCACTTAGCAATTTGTCAT
CT0043619      <-- TGTCTTACTTGAGACGCAGAGGTTCTGTGGTCCACTTAGCAATTTGTCAT
ET0038840      <-- .GTCTTACTTGAGACGCAGAGGTTCTGTGGTCCACTTAGCAATTTGTCAT
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               951    -   1001
RU04451        --> AATT----GTGATTTCGTTTGTAGTACATTTGTCCATTTTCGTAATAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- ..................................................
CT0030268      <-- ..................................................
ET0104722      <-- ..................................................
ET0039546      <-- ..................................................
CT0010529      <-- ..................................................
ET0052397      <-- AATT----GTGATTTCGTTTt.............................
ET0047022      <-- AATT----GTGATTTCGTTTGTAGTACATTTGTCCATTTTCGTAATAGTA
ET0035327      <-- AATT----GTGATTTCGTTTGTAGTACATTTGTCCATTTTCGTAATAGTA
ET0050418      <-- AATTCCCCGTGATTTCGTTTGTAGTACATTTGTCCATTTTCGTAATAGTA
CT0019385      <-- AATT----GTGATTTCGTTTGTAGTACATTTGTCCATTTTCGTAATAGTA
CT0043619      <-- AATT----GTGATTTCGTTTGTAGTACATTTGTCCATTTTCGTAATAGTA
ET0038840      <-- AATT----GTGATTTCGTTTGTAGTACATTTGTCCATTTTCGTAATAGTA
ET0134550      --> ..................................................
CT0043524      --> ..................................................
CT0052426      --> ..................................................
CT0052497      --> ..................................................
CT0032290      --> ..................................................
ET0014742      --> ..................................................
ET0122368      --> ..................................................
CT0005964      --> ..................................................
CT0090994      --> ..................................................
CT0093161      --> ..................................................
RH04C31        --> ..................................................
ET0028931      --> ..................................................

               1001   -   1051
RU04451        --> TTCTTACA-TGCCACTCTAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~
ET0132986      <-- .......................
CT0030268      <-- .......................
ET0104722      <-- .......................
ET0039546      <-- .......................
CT0010529      <-- .......................
ET0052397      <-- .......................
ET0047022      <-- TTCTTACACTGCCAaaaaaaa..
ET0035327      <-- TTCTTACA-TGCC..........
ET0050418      <-- TTCTTACA-TGCC..........
CT0019385      <-- TTCTTACAaaaaaaaa.......
CT0043619      <-- TTCTTACAaaaaaaaa.......
ET0038840      <-- TTCTTACA-TGCCACTCTAGGTT
ET0134550      --> .......................
CT0043524      --> .......................
CT0052426      --> .......................
CT0052497      --> .......................
CT0032290      --> .......................
ET0014742      --> .......................
ET0122368      --> .......................
CT0005964      --> .......................
CT0090994      --> .......................
CT0093161      --> .......................
RH04C31        --> .......................
ET0028931      --> .......................