SNPs of unigene RU04516
               1      -     51
RU04516        --> AGGGTAAGGAAGTAACCGTAGTAACAAGATCAGAGAGAGATAAACACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- ..................................................
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> AGGGTAAGGAAGTAACCGTAGTAACAAGATCAGAGAGAGATAAACACCAC
ET0067251      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0068206      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0068565      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0069520      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0085321      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0085383      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0088643      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0092357      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0092661      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0096355      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0096579      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0099504      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0105440      --> ........gggaggagtaccgtgtacAGATCAGAGAGAGATAAACACCAC
ET0115285      --> .........................................AAACACCAC
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               51     -    101
RU04516        --> CAAAAAAGAGCCTACTCAATTCAAAATTCCAAAAACCAAAAACCAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- ..................................................
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0067251      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0068206      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0068565      --> CAAAAAAGAGCCTACTCAAATCAAAA........................
ET0069520      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0085321      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0085383      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0088643      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0092357      --> CAAAAAAGAGCCTACTCAAATCAAAAT.......................
ET0092661      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0096355      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0096579      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0099504      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0105440      --> CAAAAAAGAGCCTACTCAAATCAAAATT......................
ET0115285      --> CAAAAAAGAGCCTACTCAATTCAAAATTCCAAAAACCAAAAACCAAAAAA
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               101    -    151
RU04516        --> AAGAAAAAAGGAATAGAAAAAGCGCACTACAAAATCTCTGTGTGCGTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..........................................TGCGTGCC
CT0019151      <-- ..................................................
RH03B40        <-- ..................................................
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> AAGAAAAAAGGAATAGAAAAAGCGCACTACAAAATCTCTGTGTGCGTGCC
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               151    -    201
RU04516        --> GTCACCAGAAGAAGAGGAGAGTAGAGAAGAAGCGAAGCGGTGGGAGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- GTCACCAGAAGAAGAGGAGAGTAGAGAAGAAGCGAAGCGGTGGGAGATGG
CT0019151      <-- ...................................AGCGGTGGGAGATGG
RH03B40        <-- ..................................................
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> GTCACCAGAAGAAGAGGAGAGTAGAGAAGAAGCGAAGCGGTGGGAGATGG
CT0106985      --> ......................AGAGAAGAAGCGAAGCGGTGGGAGATGG
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               201    -    251
RU04516        --> GGCAGAAGTCGCTGATCTACGCGTTCGTGGCGCGAGGCACCGTGATTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- GGCAGAAGTCGCTGATCTACGCGTTCGTGGCGCGAGGCACCGTGATTCTT
CT0019151      <-- GGCAGAAGTCGCTGATCTACGCGTTCGTGGCGCGAGGCACCGTGATTCTT
RH03B40        <-- ..................................................
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> GGTAGAAGTCGCTGATCTACGCGTTCGTGGCGCGAGGCACCGTGATTCTT
CT0106985      --> GGCAGAAGTCGCTGATCTACGCGTTCGTGGCGCGAGGCACCGTGATTCTT
CT0039815      --> ...................................GGCACCGTGATTCTT
ET0001571      --> ..................................................
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               251    -    301
RU04516        --> GCCGAGTACACCGAATTCAGCGGCAATTTCAACTCCATAGCCTTCCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- GCCGAGTACACCGAATTCAGCGGCAATTTCAACTCCATAGCCTTCCAGTG
CT0019151      <-- GCCGAGTACACCGAATTCAGCGGCAATTTCAACTCCATAGCCTTCCAGTG
RH03B40        <-- ......................GCAATTTCAACTCCATAGCCTTCCGGTG
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> GCCGAGTACACCGAATTCAGCGGCAATTTCAACTCCATAGCCTTCCAGTG
CT0106985      --> GCCGAGTACACCGAATTCAGCGGCAATTTCAACTCCATAGCCTTCCAGTG
CT0039815      --> GCCGAGTACACCGAATTCAGCGGCAATTTCAACTCCATAGCCTTCCAGTG
ET0001571      --> ..................................................
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               301    -    351
RU04516        --> CCTCCAGAAGCTTCCGGCCACCAACAACAAGTTCACCTACAACTGCGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- CCTCCAGAAGCTTCCGGCCACCAACAACAAGTTCACCTACAACTGCGACG
CT0019151      <-- CCTCCAGAAGCTTCCGGCCACCAACAACAAGTTCACCTACAACTGCGACG
RH03B40        <-- CCTCCAGAAGCTTCCGGCCACCAACAACAAGTTCACCTACAACTGCGACG
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> CCT...............................................
CT0106985      --> CCTCCAGAAGCTTCCGGCCACCAACAACAAGTTCACCTACAACTGCGACG
CT0039815      --> CCTCCAGAAGCTTCCGGCCACCAACAACAAGTTCACCTACAACTGCGACG
ET0001571      --> ...........................CAAGTTCACCTACAACTGCGACG
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               351    -    401
RU04516        --> GCCACACCTTCAATTACCTCGTCGACAATGGCTACACATACTGTGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- GCCACACCTTCAATTACCTCGTCGACA.......................
CT0019151      <-- GCCACACCTTCAATTACCTCGTCGACAATGGCTACACATACTGTGTGGTG
RH03B40        <-- GCCACACCTTCAATTACCTCGTCGACAATGGCTACACATACTGTGTGGTG
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> GCCACACCTTCAATTACCTCGTCGACAATGGCTACACATACTGTGTGGTG
CT0039815      --> GCCACACCTTCAATTACCTCGTCGACAATGGCTACACATACTGTGTGGTG
ET0001571      --> GCCACACCTTCAATTACCTCGTCGACAATGGCTACACATACTGTGTGGTG
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               401    -    451
RU04516        --> GCAGATGAATCAGTTGGAAGACAAGTGCCTATTGCTTTTCT-GGAGCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- GCAGATGAATCA......................................
RH03B40        <-- GCAGATGAATCAGTTGGAAGACAAGTGCCTATTGCTTTTCT-GGAGCGTG
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> GCAGA.............................................
CT0039815      --> GCAGATGAATCA......................................
ET0001571      --> GCAGATGAATCAGTTGGAAGACAAGTGCCTATTGCTTTTCTTGGAGCGTG
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               451    -    501
RU04516        --> CGAAGGATGATTTTGTT-GCAAAATATGGTGGTGGCAAGGCCGCTACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- CGAAGGATGATTTTGTT-GCAAAATATGGTGGTGGCAAGGCCGCTACAGC
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> CGAAGGATGATTTTGTTTGCAAAATATGGTGGTGGCAAGGCCGCTACAGC
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               501    -    551
RU04516        --> TGCTGCCAACAGTCTTAACAAGGAATTTGG-TCAAAATTGAAGGAACATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- TGCTGCCAACAGTCTTAACAAGGAATTTGGGTCAAAATTGAAGGAACATA
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> TGCTGCCAACAGTCTTAACAAGGAATTTGG-TCAAAATTGAAGGAACATA
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               551    -    601
RU04516        --> TGCAATACTGTGTTGATCATCCTGAAGAAATAAGCAAGCTTGCTAAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- TGCAATACTGTGTTGATCATCCTGAAGAAATAAGCAAGCTTGCTAAGGTT
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> TGCAATACTGT.......................................
RH37AN191      --> ..........................GAAATAAGCAAGCTTGCTAAGGTT
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               601    -    651
RU04516        --> AAGGCCCAGGCTTCAGAAGTTAAAGGTGTTATGATGGAGAACATTGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- AAGGCCCAGGCTTCAGAAGTTAAAGGTGTTATGATGGAGAACATTGAAAA
ET0091657      <-- ..................................................
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> AAGGCCCAGGTTTCAGAAGTTAAAGGTGTTATGATGGAGAACATTGAAAA
ET0046316      --> ..........................cataacacctttaacttcTGAAAA
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               651    -    701
RU04516        --> GGTTTTGGATAGAGGGGAAAAGATAGAGCTTTTGGTTGATAAGACTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- GGTTTTGGATAGAGGGGAAAAGATAGAGCTTTTGGTTGATAAGACTGAGA
ET0091657      <-- .tTTTAGGATAGAGGGGAAAAGATAGAGCTTTTGGTTGATAAGACTGAGA
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> GGTTTTGGATAGAGGGGAAAAGATAGAGCTTTTGGTTGATAAGACTGAGA
ET0046316      --> GGTTTTGGATAGAGGGGAAAAGATAGAGCTTTTGGTTGATAAGACTGAGA
ET0128388      --> ........................................AAGACTGAGA
ET0140669      --> ........................................AAGACTGAGA
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               701    -    751
RU04516        --> CTCTTCATCATCAGGCACAGGACTTCCGT-AACGTT-GGGACTAAAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- CTCTTCATCATCAGGCACAGGACTTCCGT-AACGTT-GGGACTAAAATGA
ET0091657      <-- CTCTTCATCATCAGGCACAGGACTTCCGT-AACGTT-GGGACTAAAATGA
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> CTCTTCATCATCAGGCACAGGACTTCCGT-AACGTT-GGGACTAAAATGA
ET0046316      --> CTCTTCATCATCAGGCACAGGACTTCCGT-AACGTT-GGGACTAAAATGA
ET0128388      --> CTCTTCATCATCAGGCACAGGACTTCCGT-AACGTT-GGGACTAAAATGA
ET0140669      --> CTCTTCATCATCAGGCACAGGACTTCCGT-AACGTT-GGGACTAAAATGA
ET0117385      --> .....................ctTTCCGTTAACGTTTGGGACTAAAATGA
CT0019588      --> ..........................CGT-AACGTT-GGGACTAAAATGA
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> ..................................................

               751    -    801
RU04516        --> GAAGGAAGATGTGGCTGCAGAATATGAAGGTGAAGCTGATT-GTTTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- GAAGGAAGATGTGGCTGCAGAATATGAAGGTGAAGCTGATT-GTTTTGGG
ET0091657      <-- GAAGGAAGATGTGGCTGCAGAATATGAAGGTGAAGCTGATT-GTTTTGGG
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> GAAGGAAGATGTGGCTGCAGAATATGAAGGTGAAGCTGATT-GTTTTGGG
ET0046316      --> GAAGGAAGATGTGGCTGCAGAATATGAAGGTGAAGCTGATTTGTTTTGGG
ET0128388      --> GAAGGAAGATGTGGCTGCAGAATATGAAGGTGAAGCTGATT-GTTTTGGG
ET0140669      --> GAAGGAAGATGTGGCTGCAGAATATGAAGGTGAAGCTGATT-GTTTTGGG
ET0117385      --> GAAGGAAGATGTGGCTGCAGAATATGAAGGTGAAGCTGATT-GTTTTGGG
CT0019588      --> GAAGGAAGATGTGGCTGCAGAATATGAAGGTGAAGCTGATT-GTTTTGGG
CT0049043      --> ..........GTGGCTGCAGAATATGAAGGTGAAGCTGATT-GTTTTGGG
ET0018677      --> .....................ATATGAAGGTGAAGCTGATT-GTTTTGGG
CT0005452      --> ..................................................

               801    -    851
RU04516        --> AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
ET0091657      <-- AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
CT0054369      <-- ..................................................
ET0109426      <-- ..................................................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
ET0046316      --> AATTCTGATTGCATTGATCCTCATCATAATCCTCTCTTGTTTGCCATTGG
ET0128388      --> AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
ET0140669      --> AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
ET0117385      --> AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
CT0019588      --> AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
CT0049043      --> AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
ET0018677      --> AATTCTGATTGCATTGATCCTCATCATAATCCTCTCT-GTTTGCCAT-GG
CT0005452      --> ..................................................

               851    -    901
RU04516        --> TTTCAACTGCGGCGGAAATTGAGTCTTCGCCTGATCCGTTTAATCTTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................  Control
CT0019151      <-- ..................................................  Control
RH03B40        <-- TTTCAACTGCGGCGGAAATTGAGCCTTCGCCTGAACCGTTTAATCTTGTC  WaterDS
ET0091657      <-- TTTCAACTGCGGCGGAAACTGAGTCTTCGCCTGATCCGTTTAA.......  Ethylene
CT0054369      <-- ..................................................  Control
ET0109426      <-- ..................................................  Ethylene
ET0073986      --> ..................................................  Ethylene
ET0067251      --> ..................................................  Ethylene
ET0068206      --> ..................................................  Ethylene
ET0068565      --> ..................................................  Ethylene
ET0069520      --> ..................................................  Ethylene
ET0085321      --> ..................................................  Ethylene
ET0085383      --> ..................................................  Ethylene
ET0088643      --> ..................................................  Ethylene
ET0092357      --> ..................................................  Ethylene
ET0092661      --> ..................................................  Ethylene
ET0096355      --> ..................................................  Ethylene
ET0096579      --> ..................................................  Ethylene
ET0099504      --> ..................................................  Ethylene
ET0105440      --> ..................................................  Ethylene
ET0115285      --> ..................................................  Ethylene
CT0106985      --> ..................................................  Control
CT0039815      --> ..................................................  Control
ET0001571      --> ..................................................  Ethylene
RH37AN191      --> TTTCAACTGCGGCGGAAATTGAGCCTTCGCCTGAACCGTTTAATCTTGTC  WaterDS
ET0046316      --> TTTCAACTGCG.......................................  Ethylene
ET0128388      --> TTTCAACTGCGGCGGAAATTGAGCCTTCGCCTGAACCGTTTAATCTTGTC  Ethylene
ET0140669      --> TTTCAACTGCGGCGGAAATTGAGCCTTCGCCTGAACCGTTTAATCTTGTC  Ethylene
ET0117385      --> TTTCAACTGCGGCGGAAATTGAGCCTTCGCCTGAACCGTTTAATCTTGTC  Ethylene
CT0019588      --> TTTCAACTGCGGCGGAAACTGAGTCTTCGCCTGATCCGTTTAATCTTGTC  Control
CT0049043      --> TTTCAACTGCGGCGGAAACTGAGTCTTCGCCTGATCCGTTTAATCTTGTC  Control
ET0018677      --> TTTCAACTGCGGCGGAAACTGAGTCTTCGCCTGATCCGTTTAATCTTGTC  Ethylene
CT0005452      --> ..................................................  Control

               901    -    951
RU04516        --> AATCCCGACTTCTGAGATTATGTGTTATTATAAGAGAAATATCAAA-TAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- AATCCCGACTTCTGAGATTATGTGTTATTATAAGAGAAATATCAAA-TAT
ET0091657      <-- ..................................................
CT0054369      <-- ....................................AAATATCAAA-TAT
ET0109426      <-- ..........................................CAAA-TAT
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> AATCCCGACTTCTGAGATTATGTGTTATTATAAGAGAAATATCAAA-TAT
ET0046316      --> ..................................................
ET0128388      --> AATCCC............................................
ET0140669      --> AATCCC............................................
ET0117385      --> AATCCCGACTTCTGAGATTATGTGTTATTATAAGAGAAATATCAAA-TAT
CT0019588      --> AATCCCGACTTCTGAGATTATGTGTTATTATAAGAGAAATATCAAAATAT
CT0049043      --> AATCCCGACTTCTGAGATTATGTGTTATTATAAGAGAAATATCAAA-TAT
ET0018677      --> AATCCCGACTTCTGAGATTATGTGTTATTATAAGAGAA............
CT0005452      --> ...................................aAAATATCAAA-TAT

               951    -   1001
RU04516        --> CTGTTGCGACTCTGTACTCGGTGAAAAAACAGTGATTTCCAGATATATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- CTGTTGCGACTCTGT...................................
ET0091657      <-- ..................................................
CT0054369      <-- CTGTTGCGACTCTGTACTCGGTGAAAAAACAGTGATTTCCAGATATATGT
ET0109426      <-- CTGTTGCGACTCTGTACTCGGTGAAAAAACAGTGATTTCCAGATATATGT
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> CTGTTGCGACTCTGT...................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> CTGTTGCGACT.......................................
CT0019588      --> CTGTTGCGAC........................................
CT0049043      --> CTGTTGCGACTCTGTACTCGGTaa..........................
ET0018677      --> ..................................................
CT0005452      --> CTGTTGCGACTCTGTACTCGGTGAAAAAACAGTGATTTCCAGATATATGT

               1001   -   1051
RU04516        --> GGGCGGTAGGAGAAAGCGTATTTTTTGTGTGAATGGAACTCCCTATATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- ..................................................
ET0091657      <-- ..................................................
CT0054369      <-- GGGCGGTAGGAGAAAGCGTATTTTTTGTGTGAATGGAACTCCCTATATAT
ET0109426      <-- GGGCGGTAGGAGAAAGCGTATTTTTTGTGTGAATGGAACTCCCTATATAT
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> GGGCGGTAGGAGAAAGCGTATTTTTTGTGTGAATGGAACTCCCTATATAT

               1051   -   1101
RU04516        --> GTTATTACTCTGTTTTTAGAATGCATAATGAAGTTGCTTATTCTCTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0092537      <-- ..................................................
CT0019151      <-- ..................................................
RH03B40        <-- ..................................................
ET0091657      <-- ..................................................
CT0054369      <-- GTTATTACTCTGTTTTTAGAATGCATAATGAAGTTGCTTATTCTCTCAAA
ET0109426      <-- GTTATTACTCTGTTTTTAGAATGCAT........................
ET0073986      --> ..................................................
ET0067251      --> ..................................................
ET0068206      --> ..................................................
ET0068565      --> ..................................................
ET0069520      --> ..................................................
ET0085321      --> ..................................................
ET0085383      --> ..................................................
ET0088643      --> ..................................................
ET0092357      --> ..................................................
ET0092661      --> ..................................................
ET0096355      --> ..................................................
ET0096579      --> ..................................................
ET0099504      --> ..................................................
ET0105440      --> ..................................................
ET0115285      --> ..................................................
CT0106985      --> ..................................................
CT0039815      --> ..................................................
ET0001571      --> ..................................................
RH37AN191      --> ..................................................
ET0046316      --> ..................................................
ET0128388      --> ..................................................
ET0140669      --> ..................................................
ET0117385      --> ..................................................
CT0019588      --> ..................................................
CT0049043      --> ..................................................
ET0018677      --> ..................................................
CT0005452      --> GTTATTACTCTGTTTTTAGAATGCATAATGAAGTTGCTTATTCTCTac..

               1101   -   1151
RU04516        --> AAAAA
                   ~~~~~
CT0092537      <-- .....
CT0019151      <-- .....
RH03B40        <-- .....
ET0091657      <-- .....
CT0054369      <-- AAAAA
ET0109426      <-- .....
ET0073986      --> .....
ET0067251      --> .....
ET0068206      --> .....
ET0068565      --> .....
ET0069520      --> .....
ET0085321      --> .....
ET0085383      --> .....
ET0088643      --> .....
ET0092357      --> .....
ET0092661      --> .....
ET0096355      --> .....
ET0096579      --> .....
ET0099504      --> .....
ET0105440      --> .....
ET0115285      --> .....
CT0106985      --> .....
CT0039815      --> .....
ET0001571      --> .....
RH37AN191      --> .....
ET0046316      --> .....
ET0128388      --> .....
ET0140669      --> .....
ET0117385      --> .....
CT0019588      --> .....
CT0049043      --> .....
ET0018677      --> .....
CT0005452      --> .....