SNPs of unigene RU04548
               1      -     51
RU04548        --> TAGTTATGTGCCTGTTTCATATATACTTACATACAATAGAATTATAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- TAGTTATGTGCCTGTTTCATATATACTTACATACAATAGAATTATAAATA
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               51     -    101
RU04548        --> GTACACTAGATTATATAGACTCACTGTAAAACTTAA-TTATAATCTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- GTACACTAGATTATATAGACTCACTGTAAAACTTAA-TTATAATCTGATA
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ................AGACTCACTGTAAAACTTAA-TTATAATCTGATA
ET0115148      --> ................AGACTCACTGTAAAACTTAA-TTATAATCTGATA
ET0096321      --> .....................CACTGTAAAACTTAAATTATAATCTGATA
CT0087259      --> .............................................TGATA
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               101    -    151
RU04548        --> ATGTTTGTTATAGAGCAGACAAGATCTAATAGTTCGGTGTGCACTCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ATGTTTGTTATAGAGCAGACAAGATCTAATAGTTCGGTGTGCACTCAAAC
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ATGTTTGTTATAGAGCAGACAAGATCTAATAGTTCGGTGTGCACTCAAAC
ET0115148      --> ATGTTTGTTATAGAGCAGACAAGATCTAATAGTTCGGTGTGCACTCAAAC
ET0096321      --> ATGTTTGTTATAGAGCAGACAAGATCTAATAGTTCGGTGTGCACTCAAAC
CT0087259      --> ATGTTTGTTATAGAGCAGACAAGATCTAATAGTTCGGTGTGCACTCAAAC
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               151    -    201
RU04548        --> TATTTAGGAAGGAAGTCTCACTGCTAGTACTAGTACTTATCACCACACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- TATTTAGGAAGGAAGTCTCACTGCTAGTACTAGTACTTATCACCACACCA
ET0025666      <-- ......................GCTAGTACTAGTACTTATCACCACACCA
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> TACTTAGGAAGGAAGTCTCACTGCTAGTACTAGTACTTATCACCACACCA
ET0115148      --> TATTTAGGAAGGAAGTCTCACTGCTAGTACTAGTACTTATCACCACACCA
ET0096321      --> TATTTAGGAAGGAAGTCTCACTGCTAGTACTAGTACTTATCACCACACCA
CT0087259      --> TATTTAGGAAGGAAGTCTCACTGCTAGTACTAGTACTTATCACCACACCA
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               201    -    251
RU04548        --> CCATAAGTTT-GCGTAAGTTCTGTTTCACTAACCATGCCATGATCAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- CCATAAGTTT-GCGTAAGTTCTGTTTCACTAACCATGCCATG........
ET0025666      <-- CCATAAGTTTTGCGTAAGTTCTGTTTCACTAACCATGCCATGATCAGATC
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> CCATAAGTTT-GCGTAAGTTCTGTTTCACTAACCATGCCATGATCAGATC
ET0115148      --> CCATAAGTTT-GCGTAAGTTCTGTTTCACTAACCATGCCATGATCAGATC
ET0096321      --> CCATAAGTTT-GCGTAAGTTCTGTTTCACTAACCATGCCATGATCAGATC
CT0087259      --> CCATAAGTTT-GCGTAAGTTCTGTTTCACTAACCATGCCATGATCTGATC
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               251    -    301
RU04548        --> TTATAGTTTCACACCTCCCCGCTTGATGCTTCCCCTA-C-AACTTTCTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- TTATAGTTTCACACCTCCCCGCTTGATGCTTCCCCTA-C-AACTTTCTT-
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> TTATAGTTTCACACCTCCC...............................
ET0115148      --> TTATAGTTTCACACCTCCCCGCTTGATGCTTCCCCTA-C-AACTTTCTT-
ET0096321      --> TTATAGTTTCACACCTCCCCGCTTGATGCTTCCCCTA-C-AACTTTCTT-
CT0087259      --> TTATAGTTTCACACCTCCCCGCTTGATGCTTCCCCTAACGTACTTTCTTA
ET0135738      --> .....................CTTGATGCTTCCCCTA-C-AACTTTCTT-
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               301    -    351
RU04548        --> GTAAACAAATCGCTTTGCAACCCACACATAAACACCGAAAAATAGAGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- GTAAACAAATCGCTTTGCAACCCACACATAAACACCGAAAAATAGAGCGC
ET0015738      <-- tTAAACAAATCGCTTTGCAACCCACACATAAACACCGAAAAATAGAGCGC
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> GTAAACAAATCGCTTTG.................................
ET0096321      --> GTAAACAAAT........................................
CT0087259      --> GTAAACAAATacgtcttgcacgccc.........................
ET0135738      --> GTAAACAAATCGCTTTGCAGCCCACACATAAACACCGAAAAATAGAGCGC
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               351    -    401
RU04548        --> TTAGTCCTGCAAGCACCCAGTAGAAGTCATCAAGGTGTGCGCGGTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- TTAGTCCTGCAAGCACCCAGTAGAAGTCATCAAGGTGTGCGCGGTTGAGA
ET0015738      <-- TTAGTCCTGCAAGCACCCAGTAGAAGTCATCAAGGTGTGCGCGGTTGAGA
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> TTAGTCCTGCAAGCACCCAGTAGAAGTCATCAAGGTGTGCGCGGTTGAGA
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               401    -    451
RU04548        --> TTGTTACCTAACCACGGCTCACCAGAGTTTCTGGTAATAGTTTCCACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- TTGTTACCTAAaccaac.................................
ET0015738      <-- TTGTTACCTAACCACGGCTCACCAGAGTTTCTGGTAATAGTTTCCACCAA
ET0038819      <-- ...TTACCTAACCACGGCTCACCAGAGTTTCTGGTAATAGTTTCCACCAA
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> TTGTTACCTAACCACGGCTCACCAGAGTTTCTGGTAATAGTTTCCACCAA
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               451    -    501
RU04548        --> GGATATGATGAAACTGCTAAGAAAG-CTTCCAACTCCAAGAATACTAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- GGATATGATGAAACTGCTAAGAAAG-CTTCCAACTCCAAGAATACTAATG
ET0038819      <-- GGATATGATGAAACTGCTAAGAAAG-CTTCCAACTCCAAGAATACTAATG
ET0031984      <-- ..taATGATGAAACTGCTAAGAAAGACTTCCAACTCCAAGAATACTAATG
CT0015656      <-- ...........................................ACTAATG
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> GGATATGATGAAACTGCTAAGAAAG-CTTCCAACTCCAAGAATACTAATG
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               501    -    551
RU04548        --> TATGCTGCAGCTCCCAAGCTTCTCATTGCATCTGGCATTTGATCATAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- TATGCTGCAGCTCCCAAGCTTCTCATTGCATCTGGCAat...........
ET0038819      <-- TATGCTGCAGCTCCCAAGCTTCTCATTGCATCTGGCATTTGATCATAGAA
ET0031984      <-- TATGCTGCAGCTCCCAAGCTTCTCATTGCATCTGGCATTTGATCATAGAA
CT0015656      <-- TATGCTGCAGCTCCCAAGCTTCTCATTGCATCTGGCATTTGATCATAGAA
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> TATGCTGCAGCTCCCAAG................................
CT0131995      --> ............................................ATAGAA
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               551    -    601
RU04548        --> CAACTCTTGGAGTCCTATAACGGTGAATGCATCAGACAAACCAGTGATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- CAACTCTTGGAGTCCTATAACGGTGAATGCATCAGACAAACCAGTGATAA
ET0031984      <-- CAACTCTTGGAGTCCTATAACGGTGAATGCATCAGACAAACCAGTGATAA
CT0015656      <-- CAACTCTTGGAGTCCTATAACGGTGAATGCATCAGACAAACCAGTGATAA
ET0082523      <-- ......TTGGAGTCCTATAACGGTGAATGCATCAGACAAACCAGTGATAA
ET0069989      <-- ..................AACGGTGAATGCATCAGACAAACCAGTGATAA
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> CAACTCTTGGAGTCCTATAACGGTGAATGCATCAGACAAACCAGTGATAA
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               601    -    651
RU04548        --> AGTATTGTGGGAGTAACCACCAGACACTGATTGGTACCATTGCTTTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- AGTATTGTGGGAGTAACCACCAGACACTGATTGGTACC............
ET0031984      <-- AGTATTGTGGGAGTAACCACCAGACACTGATTGGTACCATTGCTTTTGGG
CT0015656      <-- AGTATTGTGGGAGTAACCACCAGACACTGATTGGTACCATTGCTTTTGGG
ET0082523      <-- AGTATTGTGGGAGTAACCACCAGACACTGATTGGTACCATTGCTTTTGGG
ET0069989      <-- AGTATTGTGGGAGTAACCACCAGACACTGATTGGTACCATTGCTTTTGGG
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> AGTATTGTGGGAGTAACCACCAGACACTGATTGGTACCATTGCTTTTGGG
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               651    -    701
RU04548        --> TTATCCATGAGGTTATATTCTCTTGCAACACCAACCCTTTTAGCTTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- TTATCCATGAGGTTATATTCTCTTGCAAC.....................
CT0015656      <-- TTATCCATGAGGTTATATTCTCTTGCAACACCAACCCTTTTAGCTTC...
ET0082523      <-- TTATCCATGAGGTTATATTCTCTTGCAAC.....................
ET0069989      <-- TTATCCATGAGGTTATATTCTCTTGCAACACCAACCCTTTTAGCTTCCAC
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> TTATCCATGAGGTTATATTCTCTTGCAACACCAACCCTTTTAGCTTCCAC
CT0112093      --> .........................................AGCTTCCAC
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               701    -    751
RU04548        --> TAGAGCTGCCACAACCATGTTGATTATGGACAAGAATAGGCCCACACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- TAGAGCTGCCACAACCATGTTGATTATGGACAAGAATAGGCCCACACCAA
ET0045060      <-- TAGAGCTGCCACAACCATGTTGATTATGGACAAGAATAGGCCCACACCAA
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> TAGAGCTGCCACAACCATGTTGATTATGGACAAGAATAGGCCCACACCAA
CT0112093      --> TAGAGCTGCCACAACCATGTTGATTATGGACAAGAATAGGCCCACACCAA
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               751    -    801
RU04548        --> TTCGTTGGAGGACTGTTATGCCCGCGGGATGTCCTGTGAACTTTCTT-AC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- TTCGTTGGAGGACTGTTATGCCCGCGGGATGTCCTGTGAACTTTCTTTAC
ET0045060      <-- TTCGTTGGAGGACTGTTATGCCCGCGGGATGTCCTGTGAACTTTCTT-AC
ET0001950      <-- .....................CCGCGGGATGTCCTGTGAACTTTCTT-AC
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> TTCGTTGGAGGACTGTTATGCCCGCGGGATGTCCTGTGAACTTTCTT-AC
CT0112093      --> TTCGTTGGAGGACTGTTATGCCCGCGGGATGTCCTGTGAACTTTCTT-AC
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               801    -    851
RU04548        --> TGTCGGGAC-AAGAATCCGGTCGTAGATTGGAACGGTAGTTACGATCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- TGTCGGGACCAAGAATCC................................
ET0045060      <-- TGTCGGGAC-AAGAATCCGGTCGTAGATTGGAACGGTAGATACGATCACA
ET0001950      <-- TGTCGGGAC-AAGAATCCGGTCGTAGATTGGAACGGTAGATACGATCACA
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> TGTCGGGAC-AAGAATCCGGT.............................
CT0112093      --> TGTCGGGAC-AAGAATCCGGTCGTAGATTGGAACGGTAGTTACGATCACA
ET0068123      --> ..................................GGTAGTTACGATCACA
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               851    -    901
RU04548        --> ATGCCAACTAGGGCTTGAAGTGATGC-AGGGGGGAACCGAAAGTTGGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ATGCCAACTAGGGCTTGAAGTGATGC-AGGGGGGAACCGAAAGTTGGGTC
ET0001950      <-- ATGCCAACTAGGGCTTGAAGTGATGCGAGGGGGGAACCGAAAGTTGGGTC
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ATGCCAACTAGGGCTTGAAGTGATGC-AGGGGGGAACCGAAAGTTGGGTC
ET0068123      --> ATGCCAACTAGGGCTTGAAGTGATGC-AGGGGGGAACCGAAAGTTGGGTC
ET0056987      --> ...................GTGATGC-AGGGGGGAACCGAAAGTTGGGTC
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               901    -    951
RU04548        --> CGATGGATCTGATCATCGTGGAACCTTGTTTGATGAAGTAGGTGTGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- CGATGGATCTGATCATCGTGGAACCTTGTTTGATGAAGTAGGTGTGGAGT
ET0001950      <-- CGATGGATCTGATCATCG................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> CGATGGATCTGATCATCGTGGAACCTTGTTTGATGAAGTAGGTG......
ET0068123      --> CGATGGATCTGATCATCGTGGAACCTTGTTTGATGAAGTAGGTGTGGAGT
ET0056987      --> CGATGGATCTGATCATCGTGGAACCTTGTTTGATGAAGTAGGTGTGGAGT
ET0022229      --> catgttcgtcaataATCGTGGAACCTTGTTTGATGAAGTAGGTGTGGAGT
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               951    -   1001
RU04548        --> TGAGATTGAACTGCGTGAAACATTAGGCAGCTCAACCATATGGGAATTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- TG................................................
ET0001950      <-- ..................................................
ET0006608      <-- .................AAACATTAGGCAGCTCAACCATATGGGAATTAG
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> TGAGATTGAACTGCGTGAAACATTAGGCAGCTCAACCATATGGGAATTAG
ET0056987      --> TGAGATTGAACTGCGTGAAACATTAGGCAGCTCAACCATATGGGAATTAG
ET0022229      --> TGAGATTGAACTGCGTGAAACATTAGGCAGCTCAACCATATGGGAATTAG
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               1001   -   1051
RU04548        --> ACGGACAACAAGCTTCACTTCTTCCACTTGATTTAGAGAGCACAACCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ACGGACAACAAGCTTCACTTCTTCCACTTGATTTAGAGAGCACAACCTCC
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ACGGACAACAAGCTTCACTTCTTCCACTTGATTTAGAGAGCACAACCTCC
ET0056987      --> ACGGACAACAAGCT....................................
ET0022229      --> ACGGACAACAAGCTTCACTTCTTCCACTTGATTTAGAGAGCACAACCTCC
CT0100476      --> ......................TCCACTTGATTTAGAGAGCACAACCTCC
CT0103494      --> ......................TCCACTTGATTTAGAGAGCACAACCTCC
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               1051   -   1101
RU04548        --> AAGGATTCC-TCATTTTGCTTGACGCATCATGTTCGTCAATAATCATTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- AAGGATTCC-TCATTTTGCTTGACGCATCATGTTCGTCAATAATCATTGC
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> AAGGATTCC-TCATTTTG................................
ET0056987      --> ..................................................
ET0022229      --> AAGGATTCC-TCATTTTGCTTGACGCATCATGTTCGTCAATAATCATTGC
CT0100476      --> AAGGATTCCCTCATTTTGCTTGACGCATCATGTTCGTCAATAATCATTGC
CT0103494      --> AAGGATTCC-TCATTTTGCTTGACGCATCATGTTCGTCAATAATCATTGC
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               1101   -   1151
RU04548        --> CTTGTCCAGAAATCTGAATTGTTTAGTACGAGCCAATGTCTTGTGCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- CTagacgctcgaca....................................
ET0117294      <-- .............................................CTTGG
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- ..................................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> CTTGTCCAGAAATCTGAATTGTTT..........................
CT0100476      --> CTTGTCCAGAAATCTGAATTGTTTAGTACGAGCCAATGTCTTGTGCTTGG
CT0103494      --> CTTGTCCAGAAATCTGAATTGTTTAGTACGAGCCAATGTCTTGTGCTTGG
ET0015586      --> ................AATTGTTTAGTACGAGCCAATGTCTTGTGCTTGG
ET0037066      --> ..................................................
CT0089213      --> ..................................................

               1151   -   1201
RU04548        --> AGTGAACCCCACTGCTCTCACCCTCATCATCACCGTAGTAGACAACATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................  Ethylene
ET0025666      <-- ..................................................  Ethylene
ET0015738      <-- ..................................................  Ethylene
ET0038819      <-- ..................................................  Ethylene
ET0031984      <-- ..................................................  Ethylene
CT0015656      <-- ..................................................  Control
ET0082523      <-- ..................................................  Ethylene
ET0069989      <-- ..................................................  Ethylene
ET0045060      <-- ..................................................  Ethylene
ET0001950      <-- ..................................................  Ethylene
ET0006608      <-- ..................................................  Ethylene
ET0117294      <-- AGTGAACCCCACTGCTCTCACCCTCATCATCACCGTAGTAGACAACATCA  Ethylene
ET0024080      <-- .......................................AGACAACATCA  Ethylene
ET0049538      <-- .......................................AGACAACATCA  Ethylene
ET0011730      <-- ..................................................  Ethylene
ET0038380      --> ..................................................  Ethylene
ET0115148      --> ..................................................  Ethylene
ET0096321      --> ..................................................  Ethylene
CT0087259      --> ..................................................  Control
ET0135738      --> ..................................................  Ethylene
CT0131995      --> ..................................................  Control
CT0112093      --> ..................................................  Control
ET0068123      --> ..................................................  Ethylene
ET0056987      --> ..................................................  Ethylene
ET0022229      --> ..................................................  Ethylene
CT0100476      --> AGTGAAACCCACTGCTCTCACCCTCATCATCACCGTAGTAGACAACATCA  Control
CT0103494      --> AGTGAAACCCACTGCTCTCACCCTCATCATCACCGTAGTAGACAACATCA  Control
ET0015586      --> AGTGAACCCCACTGCTCTCACCCTCATCATCACCGTAGTAGACAACATCA  Ethylene
ET0037066      --> .............GCTCTCACCCTCATCATCACCGTAGTAGACAACATCA  Ethylene
CT0089213      --> ..................................................  Control

               1201   -   1251
RU04548        --> TTCCGACGACCCGTCTTTACGCGCCACTTCCAAGCTGCCGCCACAAATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- TTCCGACGACCCGTCTTTACGCGCCACTTCCAAGCTGCCGCCACAAATAC
ET0024080      <-- TTCCGACGACCCGTCTTTACGCGCCACTTCCAAGCTGCCGCCACAAATAC
ET0049538      <-- TTCCGACGACCCGTCTTTACGCGCCACTTCCAAGCTGCCGCCACAAATAC
ET0011730      <-- ................................AGCTGCCGCCACAAATAC
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> TTCCGACGACCCGTCTTTACGCGCCACTTCCAAGCTGCCGCCACAAATAC
CT0103494      --> TTCCGACGACCCGTCTTTACGCGCCACTTCCAAGCTGCCGCCACAAATAC
ET0015586      --> TTCCGACGACCCGTCTTTACGCGCCACTTCCAAGCTGCCGCCACAAATAC
ET0037066      --> TTCCGACGACCCGTCTTTACGCGCCACTTCCAAGCTGCCGCCACAAATAC
CT0089213      --> ..................................................

               1251   -   1301
RU04548        --> TTGTGCCACCGTCGTGAAGGGGCTCCCCAACAGATTATCGTCGTTCCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- TTGTGCCACCGTCGTGAAGGGGCTCCCCAACAGATTATCGTCGTTCCGAT
ET0024080      <-- TTGTGCCACCGTCGTGAAGGGGCTCCCCAACAGATTATCGTCGTTCCGAT
ET0049538      <-- TTGTGCCACCGTCGTGAAGGGGCTCCCCAACAGATTATCGTCGTTCCGAT
ET0011730      <-- TTGTGCCACCGTCGTGAAGGGGCTCCCCAACAGATTATCGTCGTTCCGAT
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> TTGTcg............................................
CT0103494      --> TTGTcg............................................
ET0015586      --> TTGTGCCACCGTCGTGAAGGGGCTCCCCAACAGATTATCGTCGTTCCGAT
ET0037066      --> TTGTGCCACCGTCGTGAAGGGGCTCCCCAACAGATTATCGTCGTTCCGAT
CT0089213      --> ..................................................

               1301   -   1351
RU04548        --> ACCTTCGGATTCCGAGTACAAATAATAGGAGGCCTGCTGCTATTACCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ACCTTCGGATTCCGAGTACAAATAATAGGAGGCCTGCTGCTATTACCACT
ET0024080      <-- ACCTTCGGATTCCGAGTACAAATAATAGGAGGCCTGCTGCTATTACCACT
ET0049538      <-- ACCTTCGGATTCCGAGTACAAATAATAGGAGGCCTGCTGCTATTACCACT
ET0011730      <-- ACCTTCGGATTCCGAGTACAAATAATAGGAGGCCTGCTGCTATTACCACT
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ACCTTCGGATTCCGAGTACAAATAATAGGAGGCCTGCTGCTATTACCACT
ET0037066      --> ACCTTCGGATTCCGAGTACAAATAATAGGAGGCCTGCTGCTATTACCACT
CT0089213      --> .............GAGTACAAATAATAGGAGGCCTGCTGCTATTACCACT

               1351   -   1401
RU04548        --> GCCAAGACACTATAGCTCAGCACCCAGCTCACATTATCCTGAATATAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- GCCAAGACACTATAGCTCAGCACCCAGCTCACATT...............
ET0024080      <-- GCCAAGACACTATAGCTCAG..............................
ET0049538      <-- GCCAAGACACTATAGCTCAG..............................
ET0011730      <-- GCCAAGACACTATAGCTCAGCACCCAGCTCACATTATCCTGAATATAGAT
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> GCCAAGACACTATAG...................................
ET0037066      --> GCCAAGACACTATAGCTCAGCACCCAGCT.....................
CT0089213      --> GCCAAGACACTATAGCTCAGCACCCAGCTCACATTATCCTGAATATAGAT

               1401   -   1451
RU04548        --> GATACCAAGTGTGGCAGCAGTGGCGGTGACAACTATAGCCAAATACCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- ..................................................
ET0025666      <-- ..................................................
ET0015738      <-- ..................................................
ET0038819      <-- ..................................................
ET0031984      <-- ..................................................
CT0015656      <-- ..................................................
ET0082523      <-- ..................................................
ET0069989      <-- ..................................................
ET0045060      <-- ..................................................
ET0001950      <-- ..................................................
ET0006608      <-- ..................................................
ET0117294      <-- ..................................................
ET0024080      <-- ..................................................
ET0049538      <-- ..................................................
ET0011730      <-- GATACCAAGTGTG.....................................
ET0038380      --> ..................................................
ET0115148      --> ..................................................
ET0096321      --> ..................................................
CT0087259      --> ..................................................
ET0135738      --> ..................................................
CT0131995      --> ..................................................
CT0112093      --> ..................................................
ET0068123      --> ..................................................
ET0056987      --> ..................................................
ET0022229      --> ..................................................
CT0100476      --> ..................................................
CT0103494      --> ..................................................
ET0015586      --> ..................................................
ET0037066      --> ..................................................
CT0089213      --> GATACCAAGTGTGGCAGCAGTGGCGGTGACAACTATAGCCAAATACCACC

               1451   -   1501
RU04548        --> AGTTGAAGAATGAGCTCTTAGCCTCCTTGTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021055      <-- .................................
ET0025666      <-- .................................
ET0015738      <-- .................................
ET0038819      <-- .................................
ET0031984      <-- .................................
CT0015656      <-- .................................
ET0082523      <-- .................................
ET0069989      <-- .................................
ET0045060      <-- .................................
ET0001950      <-- .................................
ET0006608      <-- .................................
ET0117294      <-- .................................
ET0024080      <-- .................................
ET0049538      <-- .................................
ET0011730      <-- .................................
ET0038380      --> .................................
ET0115148      --> .................................
ET0096321      --> .................................
CT0087259      --> .................................
ET0135738      --> .................................
CT0131995      --> .................................
CT0112093      --> .................................
ET0068123      --> .................................
ET0056987      --> .................................
ET0022229      --> .................................
CT0100476      --> .................................
CT0103494      --> .................................
ET0015586      --> .................................
ET0037066      --> .................................
CT0089213      --> AGTTGAAGAATGAGCTCTTAGCCTCCTTGTCCT