1 - 51
RU04886 --> TTGCGGACACTCCGATACATGAGACCTATCAGCCTCGATGGGATTACTGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- TTGCGGACACTCCGATACATGAGACCTATCAGCCTCGATGGGATTACTGG
ET0099896 <-- ..................................................
CT0031505 <-- ..................................................
ET0053091 <-- ..................................................
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> ..................................................
CT0106828 --> ..................................................
CT0072206 --> ..................................................
CT0062291 --> ..................................................
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
51 - 101
RU04886 --> GGAAGGTTTATGCAGAATTTGGTTTCTAGAGTTCCGATAATGGTGGTAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- GGAAGGTTTATGCAGAATTTGGTTTCTAGAGTTCCGATAATGGTGGTAGA
ET0099896 <-- ..................................................
CT0031505 <-- ..................................................
ET0053091 <-- ..................................................
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ...............................................gga
CT0056633 --> ...............................................gga
CT0106106 --> ..................................................
CT0106828 --> ..................................................
CT0072206 --> ..................................................
CT0062291 --> ..................................................
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
101 - 151
RU04886 --> AGGGAATCATGAAGTAGAAGAACAGGTTGAGAACAAGACATTCGTTGCTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- AGGGAATCATGAAGTAGAAGAACAGGTTGAGAACAAGACATTCGTTGCTT
ET0099896 <-- ..................................................
CT0031505 <-- ..................................................
ET0053091 <-- ..................................................
ET0118145 --> .............GTAGAAGAACAGGTTGAGAACAAGACATTCGTTGCTT
CT0081214 --> ..............TAGAAGAACAGGTTGAGAACAAGACATTCGTTGCTT
CT0041598 --> aggaaggctggaagagGAAGAACAGGTTGAGAACAAGACATTTGTGGCTT
CT0056633 --> aggaaggctggaagagGAAGAACAGGTTGAGAACAAGACATTTGTGGCTT
CT0106106 --> ..................................................
CT0106828 --> ..................................................
CT0072206 --> ..................................................
CT0062291 --> ..................................................
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
151 - 201
RU04886 --> ATAGTTCTCGGTTTGCATTCCCATCTGCAGAAAGTGGATCTTCATCCCCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ATAGTTCTCGGTTTGCATTCCCATCTGCAG....................
ET0099896 <-- ..................................................
CT0031505 <-- ..................................................
ET0053091 <-- ..................................................
ET0118145 --> ATAGTTCTCGGTTTGCATTCCCATCTGCAGAAAGTGGATCTTCATCCCCA
CT0081214 --> ATAGTTCTCGGTTTGCATTCCCATCTGCAGAAAGTGGATCTTCATCCCCA
CT0041598 --> ATAGTTCTCGGTTTGCATTCCCATCTGCAGAAAGTGGATCTTCGTCCCCA
CT0056633 --> ATAGTTCTCGGTTTGCATTCCCATCTGCAGAAAGTGGATCTTCGTCCCCA
CT0106106 --> ..................................................
CT0106828 --> ..................................................
CT0072206 --> ..................................................
CT0062291 --> ..................................................
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
201 - 251
RU04886 --> ATGTACTACTCGTTTAATGCAGGGGGGATTCATTTCATTATGCTTGGAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- ..................................................
CT0031505 <-- ..................................................
ET0053091 <-- ..................................................
ET0118145 --> ATGTACTACTCGTTTAATGCAGGGGGGATTCATTTCATTATGCTTGGAGC
CT0081214 --> ATGTACTACTCGTTTAATGCAGGGGGGATTCATTTCATTATGCTTGGAGC
CT0041598 --> ATGTACTACTCGTTTAATGCAGGGGGGATTCATTTCATTATGCTTGGAGC
CT0056633 --> ATGTACTACTCGTTTAATGCAGGGGGGATTCATTTCATTATGCTTGGAGC
CT0106106 --> ..................................................
CT0106828 --> ..................................................
CT0072206 --> ..................................................
CT0062291 --> ..................................................
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
251 - 301
RU04886 --> CTATACTCTCTTTGACAAATCATCGGAGCAATACAGGTGGCTGGAGCAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- ..............................ATACAGGTGGCTGGAGCAAG
CT0031505 <-- ..................................................
ET0053091 <-- ..................................................
ET0118145 --> CTATACTCTCTTTGACAAATCATCGGAGCAATACAGGTGGCTGGAGCAAG
CT0081214 --> CTATACTCTCTTTGACAAATCATCGGAGCAATA.................
CT0041598 --> CTATACTCTCTTTGACAAATCttgctccagccacctgtattg........
CT0056633 --> CTATACTCTCTTTGACAAATCttgctccagccacctgtattg........
CT0106106 --> ......................TCGGAGCAATACAGGTGGCTGGAGCAAG
CT0106828 --> ......................TCGGAGCAATACAGGTGGCTGGAGCAAG
CT0072206 --> ..................................................
CT0062291 --> ..................................................
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
301 - 351
RU04886 --> ATTTGG-CCAAGGTGGACAGATCCACGACTCCATGGCTGGTAGCTACTTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- ATTTGGTCCAAGGTGGACAGATCCACGACTCCATGGCTAGTAGCTACTTG
CT0031505 <-- ..................................................
ET0053091 <-- ..................................................
ET0118145 --> ATTTGG-CCAAGGTAGACAGATCCACGACTCCATGGCTGGTAGCTA....
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> ATTTGG-CCAAGGTAGACAGATCCACGACTCCATGGCTGGTAGCTACTTG
CT0106828 --> ATTTGG-CCAAGGTAGACAGATCCACGACTCCATGGCTGGTAGCTACTTG
CT0072206 --> ................ACAGATCCACGACTCCATGGCTAGTAGCTACTTG
CT0062291 --> ..................................................
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
351 - 401
RU04886 --> GCATCCACCGTGGTACAGTACCTATGTAGCCCATTACAGAGAGGCAGAAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- GCATCCACCGTGGTACAGTACCTATGTAGCCCATTACAGAGAGGCAGAAT
CT0031505 <-- ..................................................
ET0053091 <-- ..................................................
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> GCATCCACCGTGGTACAGTACCTATGTAGCCCATTACAGAGAGGCAGAAT
CT0106828 --> GCATCCACCGTGGTACAGTACCTATGTAGCCCATTACAGAGAGGCAGAAT
CT0072206 --> GCATCCACCGTGGTACAGTACCTATGTAGCCCATTACAGAGAGGCAGAAT
CT0062291 --> ..................................................
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
401 - 451
RU04886 --> GTATGAGACTGG--AAATGGAAGAGTTACTTTACTCTTGTGGCGTTGATA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- GTATGAGACTGGGAAAATGGAAGAGTTACTTTACTCTTATGGCGTTGATA
CT0031505 <-- ..................................................
ET0053091 <-- ..................................................
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> GTATGAGACTGG--AAATGGAAGAGTTACTTTACTCTTGTGGCATTGATA
CT0106828 --> GTATGAGACTGG--AAATGGAAGAGTTACTTTACTCTTGTGGCATTGATA
CT0072206 --> GTATGAGACTGG--AAATGGAAGAGTTACTTTACTCTTATGGCGTTGATA
CT0062291 --> ...........................ctTTTACTCTTATGGCGTTGATA
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
451 - 501
RU04886 --> TAGTGTTCAGTGGACATGTTCATGCCTACGAGAGGTCAAATCGAGTTTAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- TAGTGTTCAGTGGACATGTCCATGCCTACGAGAGGTCAAATCGAGTTTAT
CT0031505 <-- ..........TGGACATGTTCATGCCTACGAGAGGTCAAATCGAGTTTAT
ET0053091 <-- ..................................................
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> TAGTGTTCAGTGGACATGTTCATGCCTACGAGAGGTCAAATCGAGTTTAT
CT0106828 --> TAGTGTTCAGTGGACATGTTCATGCCTACGAGAGGTCAAATCGAGTTTAT
CT0072206 --> TAGTGTTCAGTGGACATGTCCATGCCTACGAGAGGTCAAATCGAGTTTAT
CT0062291 --> TAGTGTTCAGTGGACATGTCCATGCCTACGAGAGGTCAAATCGAGTTTAT
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
501 - 551
RU04886 --> AATTACACATTAGATCCATGTGGTCCTGTGCATATCACTATTGGTGATGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- AAa...............................................
CT0031505 <-- AATTACACATTAGATCCATGTGGTCCTGTGCATATCACTATTGGTGATGG
ET0053091 <-- ..................................................
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> AA................................................
CT0106828 --> AA................................................
CT0072206 --> AATTACACATTAGATCCATGTG-TCCTGTGCATATCA.............
CT0062291 --> AATTACACATTAGATCCATGTGGTCCTGTGCATATCACTATTGGTGATGG
CT0091146 --> ..................................................
CT0092300 --> ..................................................
CT0097031 --> ..................................................
ET0028670 --> ..................................................
ET0055254 --> ..................................................
551 - 601
RU04886 --> AGGTAATCGAGAGAAGATGGCAGTCCAACATGCTGATGAACCTGGTCTGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- ..................................................
CT0031505 <-- AGGTAATCGAGAGAAGATGGCAATCCAACATGCTGATGAACCTGGTCTGT
ET0053091 <-- .......................aCCAACATGCTGATGAACCTGGTCTGT
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> ..................................................
CT0106828 --> ..................................................
CT0072206 --> ..................................................
CT0062291 --> AGGTAATCGAGAGAAGATGGCAGTCCAACATGCTGATGAACCTGGTCTGT
CT0091146 --> ......................aTCCAACATGCTGATGAACCTGGTCTGT
CT0092300 --> ......................aTCCAACATGCTGATGAACCTGGTCTGT
CT0097031 --> ......................aTCCAACATGCTGATGAACCTGGTCTGT
ET0028670 --> ..................................................
ET0055254 --> ..................................................
601 - 651
RU04886 --> GCCCAAAGCCAAGTGCTGATGAATACCTCGGCATGTGTGCAAGAAATTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- ..................................................
CT0031505 <-- GCCCAAAGCCAAGTGCTGATGAATACCTCGGCATGTGTGCAAGAAATTTT
ET0053091 <-- GCCCAAAGCCAAGTGCTGATGAATACCTCGGCATGTGTGCAAGAAATTTT
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> ..................................................
CT0106828 --> ..................................................
CT0072206 --> ..................................................
CT0062291 --> GCCCAACGCCAAGTGCTGATGAATACCTCGGCATGTGT............
CT0091146 --> GCCCAAAGCCAAGTGCTGATGAATACCTCGGCATGTGTGCAAGAAATTTT
CT0092300 --> GCCCAAAGCCAAGTGCTGATGAATACCTCGGCATGTGTGCAAGAAATTTT
CT0097031 --> GCCCAAAGCCAAGTGCTGATGAATACCTCGGCATGTGTGCAAGAAATTTT
ET0028670 --> ..................ATGAATACCTCGGCATGTGTGCAAGAAATTTT
ET0055254 --> ................attgtAATACCTCGGCATGTGTGCAAGAAATTTT
651 - 701
RU04886 --> ACATCCGGTCCAGCAGCTGGTAAATTTTGTTGGG-ATCGGCAACCAGATT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- ..................................................
CT0031505 <-- ACATCCGGTCCAGCAGCTGGTAAATTTTG.....................
ET0053091 <-- ACATCCGGTCCAGCAGCTGGTAAATTTTGTTGGGGATCGGCAACCAGATT
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> ..................................................
CT0106828 --> ..................................................
CT0072206 --> ..................................................
CT0062291 --> ..................................................
CT0091146 --> ACATCCGGTCCAGCAGCTGGTAAATTTTGTTGGG-ATCGGCAACCAGATT
CT0092300 --> ACATCCGGTCCAGCAGCTGGTAAATTTTGTTGGG-ATCGGCAACCAGATT
CT0097031 --> ACATCCGGTCCAGCAGCTGGTAAATTTTGTTGGG-ATCGGCAACCAGATT
ET0028670 --> ACATCCGGTCCAGCAGCTGGTAAATTTTGTTGGG-ATCGGCAACCAGATT
ET0055254 --> ACATCCGGTCCAGCAGCTGGTAAATTTTGTTGGG-ATCGGCAACCAGATT
701 - 751
RU04886 --> ACAGTGCTTTCAGAGAAAGCAGCTTTGGCCATGGGATCCTTGAGGTGAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- .................................................. Ethylene
ET0099896 <-- .................................................. Ethylene
CT0031505 <-- .................................................. Control
ET0053091 <-- ACAGTGCCTTCAGAGAAAGCAGCTTTGGCCATGGGATCCTTGAGGTGAAG Ethylene
ET0118145 --> .................................................. Ethylene
CT0081214 --> .................................................. Control
CT0041598 --> .................................................. Control
CT0056633 --> .................................................. Control
CT0106106 --> .................................................. Control
CT0106828 --> .................................................. Control
CT0072206 --> .................................................. Control
CT0062291 --> .................................................. Control
CT0091146 --> ACAGTGCTTTCAGAGAAAGCAGCTTTGGCCATGGGATCCTTGAGGTGAAG Control
CT0092300 --> ACAGTGCTTTCAGAGAAAGCAGCTTTGGCCATGGGATCCTTGAGGTGAAG Control
CT0097031 --> ACAGTGCTTTCAGAGAAAGCAGCTTTGGCCATGG-ATCCTTGAGGTGAAG Control
ET0028670 --> ACAGTGCCTTCAGAGAAAGCAGCTTTGGCCATGGGATCCTTGAGGTGAAG Ethylene
ET0055254 --> ACAGTGCCTTCAGAGAAAGCAGCTTTGGCCATGGGATCCTTGAGGTGAAG Ethylene
751 - 801
RU04886 --> AATGAGACTTGGGCTCTATGGACATGGTACCGAAATCAGGACTCTGAAgg
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0013104 <-- ..................................................
ET0099896 <-- ..................................................
CT0031505 <-- ..................................................
ET0053091 <-- AATGAGACTTGGGCTCTATGGACATGGTACCGAAATCAGGACaatacagg
ET0118145 --> ..................................................
CT0081214 --> ..................................................
CT0041598 --> ..................................................
CT0056633 --> ..................................................
CT0106106 --> ..................................................
CT0106828 --> ..................................................
CT0072206 --> ..................................................
CT0062291 --> ..................................................
CT0091146 --> AATGAGACTTGGGCTCTATGGACATGGTACCGAAATCAGGACT.......
CT0092300 --> AATGAGACTTGGGCTCTATGGACATGGTACCGAAATCAGGACT.......
CT0097031 --> AATGAGACTTGGGCTCTATGGACATGGTACCaa.................
ET0028670 --> AATGAGACTTGGGCTCTATGGACATGGTACCGAAATCAGGACTCTGAA..
ET0055254 --> AATGAGACTTGGGCTCTATGGACATGGTACCGAAATCAGGACTCTGA...
801 - 851
RU04886 --> ct
~~
ET0013104 <-- ..
ET0099896 <-- ..
CT0031505 <-- ..
ET0053091 <-- ct
ET0118145 --> ..
CT0081214 --> ..
CT0041598 --> ..
CT0056633 --> ..
CT0106106 --> ..
CT0106828 --> ..
CT0072206 --> ..
CT0062291 --> ..
CT0091146 --> ..
CT0092300 --> ..
CT0097031 --> ..
ET0028670 --> ..
ET0055254 --> ..
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