SNPs of unigene RU04986
               1      -     51
RU04986        --> TTGTCGCAGCAGGATGAAACCGTGATATGGAAAAAGACAAGTAAAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- TTGTCGCAGCAGGATGAAACCGTGATATGGAAAAAGACAAGTAAAAGAAA
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               51     -    101
RU04986        --> TTGTTACAGTTCACGGAAATCTGGTTCAGGGCCCTCTCTATGCAGTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- TTGTTACAGTTCACGGAAATCTGGTTCAGGGCCCTCTCTATGCAGTAAAG
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               101    -    151
RU04986        --> GCCATGATATTGAATCACCATATTACCGACCACTCCAAGCCTGCATTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- GCCATGATATTGAATCACCATATTACCGACCACTCCAAGCCTGCATTGGG
ET0028949      <-- ...ATGATATTGAATCACCATATTACCGACCACTCCAAGCCTGCATTGGG
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               151    -    201
RU04986        --> GGAACACAGAGCCGTCGATGGATTCCTATTGAACAGAGGACAACCTGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- GGAACACAGAGCCGTCGATG..............................
ET0028949      <-- GGAACACAGAGCCGTCGATGGATTCCTATTGAACAGAGGACAACCTGGCC
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................AGAGGACAACCTGGCC
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               201    -    251
RU04986        --> TTCTAGGGCTAACCTGAACAAGAGTGAACTTGCTATATATGGATTGCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- TTCTAGGGCTAACCTGAACAAGAGTGAACTTGCTATATATGGATTGCACC
ET0067603      <-- .......................................TGGATTGCACC
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> TTCTAGGGCTAACCTGAACAAGAGTGAACTTGCTATATATGGATTGCACC
CT0012585      --> ..................CAAGAGTGAACTTGCTATATATGGATTGCACC
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               251    -    301
RU04986        --> AACAAGAACTTGCTGAGGATGCTGAAACTTGGAAAATGGCAGTCCGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- AAC...............................................
ET0067603      <-- AACAAGAACTTGCTGAGGATGCTGAAACTTGGAAAATGGCAGTCCGTAAT
CT0016664      <-- ..........................................TCCGTAAT
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> AACAAGAACTTGCTGAGGATGCTGAAACTTGGAAAATGGCAGTCCGTAAT
CT0012585      --> AACAAGAACTTGCTGAGGATGCTGAAACTTGGAAAATGGCAGTCCGTAAT
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               301    -    351
RU04986        --> TATTGGTCTCTTCTGTCACCATTAATTTTCTCAGATCATCCAAAGAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- TATTGGTCTCTTCTGTCACCATTAATTTTCTCAGATCATCCAAAGAGGCC
CT0016664      <-- TATTGGTCTCTTCTGTCACCATTAATTTTCTCAGATCATCCAAAGAGGCC
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> TATTGGTCTCTTCTGTCACCATTAATTTTCTCAGATCATCCAAAGAGGCC
CT0012585      --> TATTGGTCTCTTCTGTCACCATTAATTTTCTCAGATCATCCAAAGAGGCC
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               351    -    401
RU04986        --> TGGTGATGAGGATCCTTCACCTCCATATAACATGCTTAGAAATGTACTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- TGGTGATGAGGATCCTTCACCTCCATATAACATGCTTAGAAATGTACTAG
CT0016664      <-- TGGTGATGAGGATCCTTCACCTCCATATAACATGCTTAGAAATGTACTAG
ET0027087      <-- ...........ATCCTTCACCTCCATATAACATGCTTAGAAATGTACTAG
CT0026312      <-- ..................................CTTAGAAATGTACTAG
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> TGGTGATGAGGATCCTTCACCTCCATATAACATGCTTAGAAATGTACTAG
CT0012585      --> TGGTGATGAGGATCCTTCA...............................
ET0130256      --> .........aGATCCTTCACCTCCATATAACATGCTTAGAAATGTACTAG
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               401    -    451
RU04986        --> ACATGAATGCACGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ACATGAATGCACGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
CT0016664      <-- ACATGAATGCACGATTTGGTGGTTTAA.......................
ET0027087      <-- ACATGAATGCACGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
CT0026312      <-- ACATGAATGCACGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ACATGAATGCACG.....................................
CT0012585      --> ..................................................
ET0130256      --> ACATGAATGCACGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
CT0034823      --> ...........CGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
CT0035028      --> ...........CGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
CT0040242      --> ...........CGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
CT0040990      --> ...........CGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
CT0045511      --> ...........CGATTTGGTGGTTTAAA-TT-CTGCATTATTGGAAGCTG
CT0038575      --> ........cgaatttaggtaGGTTTAAAATTACTGCATTATTGGAAGCTG
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               451    -    501
RU04986        --> GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- GAAAGTCCGTGTGGGTAATGAATGT.........................
CT0016664      <-- ..................................................
ET0027087      <-- GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCGATTAT
CT0026312      <-- GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTAT
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTAT
CT0034823      --> GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTAT
CT0035028      --> GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTAT
CT0040242      --> GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTAT
CT0040990      --> GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTAT
CT0045511      --> GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTAT
CT0038575      --> GAAAGTCCGTGTGGGTAATGAATGTTGTCCCAACAAATGGTCCCAATTAT
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               501    -    551
RU04986        --> CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
CT0026312      <-- CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
ET0046253      <-- ..................................tttgtCACGATTGGTG
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
CT0034823      --> CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
CT0035028      --> CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
CT0040242      --> CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
CT0040990      --> CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
CT0045511      --> CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
CT0038575      --> CTGCCTTTGATCCTTGACAGGGGCTTTGTTGGAGTTTTGCACGATTGGTG
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               551    -    601
RU04986        --> TGAGCCCTTTCCAACATATCCAA-GAACTTATGATATGGTGCATGCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- TGAGCCCTTTCCAATATATCCAA-GAACTTATGATATGGTGCATGCACAA
CT0026312      <-- TGAGCCCTTTCCAATATATCCAA-GAACTTATGATATGGTGCAT......
ET0046253      <-- TGAGCC-TTTCCAACATATCCAA-GAACTTATGATATGGTGCATGCACAA
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> TGAGCCCTTTCCAATATATCCAA-GAACTTATGATATGGTG.........
CT0034823      --> TGAGCCCTTTCCAACATATCCAA-GAACTTAT..................
CT0035028      --> TGAGCCCTTTCCAACATATCCAA-GAACTTAT..................
CT0040242      --> TGAGCCCTTTCCAACATATCCAA-GAACTTAT..................
CT0040990      --> TGAGCCCTTTCCAACATATCCAA-GAACTTAT..................
CT0045511      --> TGAGCCCTTTCCAACATATCCAA-GAACTTAT..................
CT0038575      --> TGAGCCCTTTCCAACATATCCAA-GAACTTATGATATGGTGCAT......
ET0080664      --> ...........aAACATATCCAAAGAACTTATGATATGGTGCATGCACAA
CT0103778      --> ...........................................TGCACAA
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               601    -    651
RU04986        --> GGACTTCTTTCTGTTGAAACTGATCAACAGCGCAGGTGTACCATTCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- GGACTTCTTTCTGTTGAAACTGATCAACAGCGCAGGTGTACCATTCTTGA
CT0037883      <-- ..ACTTCTTTCTGTTGAAACTGATCAACAGCGCAGGTGTACCATTCTTGA
ET0144458      <-- .......TTTCTGTTGAAACTGATCAACAGCGCAGGTGTACCATTCTTGA
ET0126325      <-- ............................................TCTTGA
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> GGACTTCTTTCTGTTGAAACTGATCAACAGCGCAGGTGTACCATTCTTGA
CT0103778      --> GGACTTCTTTCTGTTGAAACTGATCAACAGCGCAGGTGTACCATTCTTGA
CT0068038      --> ............GTTGAAACTGATCAACAGCGCAGGTGTACCATTCTTGA
ET0109388      --> ..............TGAAACTGATCAACAGCGCAGGTGTACCATTCTTGA
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               651    -    701
RU04986        --> TTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- TTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
CT0037883      <-- TTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
ET0144458      <-- TTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
ET0126325      <-- TTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
ET0015631      <-- ...........AGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
CT0106962      <-- ..............TTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> TTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
CT0103778      --> TTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
CT0068038      --> TTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
ET0109388      --> TTTATTCACTGAGATTGATCGATTGCTTCGTCCAGAGGGCTGGGTGATCA
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               701    -    751
RU04986        --> TCCATGACAAAGCTTCTC--ATTGAATCAGCAAGAGCTTTGACAACAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- TCCATGACA.........................................
CT0037883      <-- TCCATGACAAAGCTTCTC--ATTGAATCAGCAAGAGCTTTGACAACAGGG
ET0144458      <-- TCCATGACAAAGCTTCTCTCATTGAATCAGCAAGAGCTTTGACAACAGGG
ET0126325      <-- TCCATGACAAAGCTTCTCTCATTGAATCAGCAAGAGCTTTGACAACAGGG
ET0015631      <-- TCCATGACAAAGCTTCTCTCATTGAATCAGCAAGAGCTTTGACAACAGGG
CT0106962      <-- TCCATGACAAAGCTTCTCTCATTGAATCAGCAAGAGCTTTGACAACAGGG
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> TCCATGACAAAGCTTCTCTCATTGAATCAGCAAGAGCTTTGACAACAGGG
CT0103778      --> TCCATGACAAAGCTTCTCTCATTGAATCAGCAAGAGCTTTGACAACAGGG
CT0068038      --> TCCATGACAAAGCTTCTCTCATTGAATCAGCAAGAGCTTTGACAACAGGG
ET0109388      --> TCCATGACAAAGCTTCTCTCATTGAATCAGCAAGAGCTTTGACAACAGGG
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               751    -    801
RU04986        --> TTGAAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGA-GA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- TTGAAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGA-GA
ET0144458      <-- TTGAAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGA-GA
ET0126325      <-- TTGAAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGA-GA
ET0015631      <-- TTGAAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGA-GA
CT0106962      <-- TTGAAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGA-GA
ET0096101      <-- .TGAAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGA-GA
CT0028045      <-- ..........ATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGA-GA
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> TTGAAGTGGGATGCACGGGTGGTAGAGATTa...................
CT0103778      --> TTGAAGTGGGATGCACGG................................
CT0068038      --> TTGAAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGAAGA
ET0109388      --> TTGAAGTGGGATG.....................................
CT0071711      --> ...AAGTGGGATGCACGGGTGGTAGAGATTGAAAGTAACAGTGATGA-GA
ET0066430      --> ........................GAGATTGAAAGTAACAGTGATGA-GA
RH04C85        --> ..................................................
RH06C228       --> ..................................................
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               801    -    851
RU04986        --> AACTACTGATATG-CCAAAAGCCCTTCTTTAAGAAACAAGCAAACTAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- AACTACTGATATG-CCAAAAGCCCTTCTTTA...................
ET0144458      <-- AA................................................
ET0126325      <-- AACTACTGATATG-CCAAAAGCCCTTCTTTAAGAAACAAGCAAACAAATA
ET0015631      <-- AACTACTGATATG-CCAAAAGCCCTTCTTTAAGAAACAAGCAAACa....
CT0106962      <-- AACTACTGATATG-CCAAAAGCCCTTCTTTAAGAAACAAGCAAACAAATA
ET0096101      <-- AACTACTGATATG-CCAAAAGCCCTTCTTTAAGAAACAAGCAAACTAATA
CT0028045      <-- AACTACTGATATG-CCAAAAGCCCTTCTTTAAGAAACAAGCAAACAAATA
ET0021887      <-- ..............CCAAAAGCCCTTCTTTAAGAAACAAGCAAACTAATA
ET0010954      <-- .................AAAGCCCTTCTTTAAGAAACAAGCAAACTAATA
ET0027396      <-- .................AAAGCCCTTCTTTAAGAAACAAGCAAACTAATA
CT0008737      <-- ....................................CAAGCAAACAAATA
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> AACTACTGATATGACCAAAAcgtcccctttactttaaagaaacaaga...
ET0109388      --> ..................................................
CT0071711      --> AACTACTGATATG-CCAAAAGCCCTTCTTTAAGAAACAAGCAAACTAATA
ET0066430      --> AACTACTGATATG-CCAAAAGCCCTTCTTTAAGAAACAAGCAAACAAATA
RH04C85        --> ..........................CTTTAAGAAACAAGCAAACAAATA
RH06C228       --> ..........................CTTTAAGAAACAAGCAAACAAATA
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               851    -    901
RU04986        --> GTGAGGAGTTTCCAAAGGGAGCCTGGGATGGTGGTATATCACTTCATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- GTGAGG............................................
ET0015631      <-- ..................................................
CT0106962      <-- GTGAGGAGTTTCCAAAGGGAGCCTGGGATGGTGGTATATCACTTCATTCA
ET0096101      <-- GTGAGGAGTTTCCAAAGGAAGCCTGGGATGGTGGTATATCACTTCATTCA
CT0028045      <-- GTGAGGAGTTTCCAAAGGGAGCCTGGGATGGTGGTATATCACTTCATTCA
ET0021887      <-- GTGAGGAGTTTCCAAAGGAAGCCTGGGATGGTGGTATATCACTTCATTCA
ET0010954      <-- GTGAGGAGTTTCCAAAGGAAGCCTGGGATGGTGGTATATCACTTCATTCA
ET0027396      <-- GTGAGGAGTTTCCAAAGGAAGCCTGGGATGGTGGTATATCACTTCATTCA
CT0008737      <-- GTGAGGAGTTTCCAAAGGGAGCCTGGGATGGTGGTATATCACTTCATTCA
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> GTGAGGAGTTTCCAAAGGAAGCCTGGGATGGTGGTATATCACTTCATTCA
ET0066430      --> GTGAGGAGTTTCCAAAGGGAGCCTGGGATGGTGGTATATCACTTCATTCA
RH04C85        --> GTGAGGAGTTTCCAAAGGGAGCCTGGGATGGTGGTATATCACTTCATTCA
RH06C228       --> GTGAGGAGTTTCCAAAGGGAGCCTGGGATGGTGGTATATCACTTCATTCA
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               901    -    951
RU04986        --> TATTCATTTACTTATTTTAATCAAATCATCATAAAGCTCCGCCATTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- TATTCATTTACTTATTTTAATCAAATCATCATAAAGCTCCGCCATTGAAG
CT0028045      <-- TATTCATTT.........................................
ET0021887      <-- TATTCATTTACTTATTTTAATCAAATCATCATAAAGCTCCGCCATTGAAG
ET0010954      <-- TATTCATTTACTTATTTTAATCAAATCATCATAAAGCTCCGCCATTGAAG
ET0027396      <-- TATTCATTTACTTATTTTAATCAAATCATCATAAAGCTCCGCCATTGAAG
CT0008737      <-- TATTCATTTACTTATTTTAATCAAATCATCATAAAGCTCCGCCATTGAAG
ET0107086      <-- ..................................................
CT0081111      <-- ..................................................
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> TATTCATTTACTTATTTTAATCAAATCATCATAAAGCTCCGCCATTGAAG
ET0066430      --> TATTCATTTACTTATTTTAATCAAATCATCATAAAGCT............
RH04C85        --> TATTCATTTACTTATTTTAATCAAATCATCATAAAGCTCCGCCATTGAAG
RH06C228       --> TATTCATTTACTTATTTTAATCAAATCATCATAAAGCTCCGCCATTGAAG
CT0044783      --> ..................................................
ET0071853      --> ..................................................
CT0042280      --> ..................................................

               951    -   1001
RU04986        --> TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCAAA-GAAACAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCA.............
CT0028045      <-- ..................................................
ET0021887      <-- TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCAAA-GAAACAGGCA
ET0010954      <-- TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCAAA-GAAACAGGCA
ET0027396      <-- TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCAAA-GAAACAGGCA
CT0008737      <-- TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCAAA-GAAACAGGCA
ET0107086      <-- ..................................caAAA-GAAACAGGCA
CT0081111      <-- .....................................AA-GAAACAGGCA
ET0129214      <-- ..................................................
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCAAAAGAAACAGGCA
ET0066430      --> ..................................................
RH04C85        --> TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCAAA-GAAACAGGCA
RH06C228       --> TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCAAA-GAAACAGGCA
CT0044783      --> TGGAGGAATCAAAAGTTTTGGACAGAAGAAGAAACCAAA-GAAACAGGCA
ET0071853      --> .............................AGAAACCAAA-GAAACAGGCA
CT0042280      --> ..................................................

               1001   -   1051
RU04986        --> AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGACACTACTCCTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGAC............
ET0010954      <-- AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGAC............
ET0027396      <-- AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGAC............
CT0008737      <-- AGGAAAGAAAATCA....................................
ET0107086      <-- AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGACACTACTCCTGTG
CT0081111      <-- AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGACACTACTCCTGTG
ET0129214      <-- .......AAAATCAGTTACCCAACTGGGTAAAAGCGACACTACTCCTGTG
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> A.................................................
ET0066430      --> ..................................................
RH04C85        --> AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGACACTACTCCTGTG
RH06C228       --> AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGACACTACTCCTGTG
CT0044783      --> AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGACACTACTCCTGTG
ET0071853      --> AGGAAAGAAAATCAGTTACCCAACTGGGTAAAAGCGACACTACTCCTGTG
CT0042280      --> ..................................................

               1051   -   1101
RU04986        --> AAGCCGTAAGGCTGTCATAGGTAC-ATAGGG-CATGTAATTATTATGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- AAGCCGTAAGGCTGTCATAGGTAC-ATAGGG-CATGTAATTATTATGGTA
CT0081111      <-- AAGCCGTAAGGCTGTCATAGGTAC-ATAGGG-CATGTAATTATTATGGTA
ET0129214      <-- AAGCCGTAAGGCTGTCATAGGTAC-ATAGGG-CATGTAATTATTATGGTA
ET0030944      <-- ..................................................
CT0000505      <-- ..................................................
ET0141242      <-- ..................................................
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> AAGCCGTAAGGCTGTCATAGGTAC-ATAGGG-CATGTAATTATTATGGTA
RH06C228       --> AAGCCGTAAGGCTGTCATAGGTAC-ATAGGG-CATGTAATTATTATGGTA
CT0044783      --> AAGCCGTAAGGCTGTCATAGGTAC-ATAGGG-CATGTAATTATTATGGTA
ET0071853      --> AAGCCGTAAGGCTGTCATAGGTAC-ATAGGG-CATGTAATTATTATGGTA
CT0042280      --> ...............CATAGGTACGATAGGGGCATGTAATTATTATGGTA

               1101   -   1151
RU04986        --> TTGAGGTCCGGAGCAATTGAGAGAGAAGTGTAGGATTAGATTT-AATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................  Control
ET0028949      <-- ..................................................  Ethylene
ET0067603      <-- ..................................................  Ethylene
CT0016664      <-- ..................................................  Control
ET0027087      <-- ..................................................  Ethylene
CT0026312      <-- ..................................................  Control
ET0046253      <-- ..................................................  Ethylene
CT0037883      <-- ..................................................  Control
ET0144458      <-- ..................................................  Ethylene
ET0126325      <-- ..................................................  Ethylene
ET0015631      <-- ..................................................  Ethylene
CT0106962      <-- ..................................................  Control
ET0096101      <-- ..................................................  Ethylene
CT0028045      <-- ..................................................  Control
ET0021887      <-- ..................................................  Ethylene
ET0010954      <-- ..................................................  Ethylene
ET0027396      <-- ..................................................  Ethylene
CT0008737      <-- ..................................................  Control
ET0107086      <-- TTGAGGTCCGGAGCAATTGAGAGAGAAGTGTAGGATTAGATTTTAATCTT  Ethylene
CT0081111      <-- TTGAGGTCCGGAGCAATTGAGAGAGAAGTGTAGGATTAAATTT-AATCTT  Control
ET0129214      <-- TTGAGGTCCGGAGCAATTGAGAGAGAAGTGTAGGATTAAATTT-AATCTT  Ethylene
ET0030944      <-- ......TCCGGAGCAATTGAGAGAGAAGTGTAGGATTAAATTT-AATCTT  Ethylene
CT0000505      <-- ...............ATTGAGAGAGAAGTGTAGGATTAAATTT-AATCTT  Control
ET0141242      <-- ..................................................  Ethylene
CT0069545      --> ..................................................  Control
CT0012585      --> ..................................................  Control
ET0130256      --> ..................................................  Ethylene
CT0034823      --> ..................................................  Control
CT0035028      --> ..................................................  Control
CT0040242      --> ..................................................  Control
CT0040990      --> ..................................................  Control
CT0045511      --> ..................................................  Control
CT0038575      --> ..................................................  Control
ET0080664      --> ..................................................  Ethylene
CT0103778      --> ..................................................  Control
CT0068038      --> ..................................................  Control
ET0109388      --> ..................................................  Ethylene
CT0071711      --> ..................................................  Control
ET0066430      --> ..................................................  Ethylene
RH04C85        --> TTGAGGTCCGGAGCAATTGAGAGAGAAGTGTAGGATTAGATTT-AATCTT  WaterDS
RH06C228       --> TTGAGGTCCGGAGCAATTGAGAGAGAAGTGTAGGATTAGATTT-AATCTT  WaterDS
CT0044783      --> TTGAGGTCCGGAGCAATTGAGAGAGAAGTGTAGGATTAAATTT-AATCTT  Control
ET0071853      --> TTGAGGTCCGGAGCAATTGAGAGAGAAGTGTAGGATTAAATTT-AATCTT  Ethylene
CT0042280      --> TTGAGGTCCGGAGCAATTGAGAGAGAAGTGTAGGATTAAATTT-AATCTT  Control

               1151   -   1201
RU04986        --> CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
CT0081111      <-- CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
ET0129214      <-- CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
ET0030944      <-- CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
CT0000505      <-- CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
ET0141242      <-- ..............ATTGTA-CTATACAACCACATGATTAAGATTGGAAG
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
RH06C228       --> CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
CT0044783      --> CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
ET0071853      --> CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG
CT0042280      --> CCATGTAATTTCTCATTGTAACTATACAACCACATGATTAAGATTGGAAG

               1201   -   1251
RU04986        --> ATGATTACAGAATAAACAAATGCAGTCAGTTTGCTATAGCCTATAAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ..................................................
ET0028949      <-- ..................................................
ET0067603      <-- ..................................................
CT0016664      <-- ..................................................
ET0027087      <-- ..................................................
CT0026312      <-- ..................................................
ET0046253      <-- ..................................................
CT0037883      <-- ..................................................
ET0144458      <-- ..................................................
ET0126325      <-- ..................................................
ET0015631      <-- ..................................................
CT0106962      <-- ..................................................
ET0096101      <-- ..................................................
CT0028045      <-- ..................................................
ET0021887      <-- ..................................................
ET0010954      <-- ..................................................
ET0027396      <-- ..................................................
CT0008737      <-- ..................................................
ET0107086      <-- ATGATTACAGAATAAACAAATGCAGTCAGTTTtagacta...........
CT0081111      <-- ATGATTACAGAATAAAAAAAa.............................
ET0129214      <-- ATGATTACAGAATt....................................
ET0030944      <-- ATGATTACAG........................................
CT0000505      <-- ATGATTACAGAATAAACAAATGCAGTCAGTTTGCTATAGTCTAT......
ET0141242      <-- ATGATTACAGAATAAACAAATGCAGTCAGTTTGCTATAGCCaaa......
CT0069545      --> ..................................................
CT0012585      --> ..................................................
ET0130256      --> ..................................................
CT0034823      --> ..................................................
CT0035028      --> ..................................................
CT0040242      --> ..................................................
CT0040990      --> ..................................................
CT0045511      --> ..................................................
CT0038575      --> ..................................................
ET0080664      --> ..................................................
CT0103778      --> ..................................................
CT0068038      --> ..................................................
ET0109388      --> ..................................................
CT0071711      --> ..................................................
ET0066430      --> ..................................................
RH04C85        --> ATGATTACAGAATAAACAAATGCAGTCAGTTTGCTATAGTCTATc.....
RH06C228       --> ATGATTACAGAATAAACAAATGCAGTCAGTTTGCTATAGTCTATc.....
CT0044783      --> ATGATTACAGAAa.....................................
ET0071853      --> ATGATTACAGAATAAACAAATGCAGTCAGTTTGCTA..............
CT0042280      --> ATGATTACAGAATAAACAAATGCAGTCAGTTTGCTATAGCCTATAAAATG

               1251   -   1301
RU04986        --> TGCTTGGCAATGCATTTATTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~
CT0108533      <-- ........................
ET0028949      <-- ........................
ET0067603      <-- ........................
CT0016664      <-- ........................
ET0027087      <-- ........................
CT0026312      <-- ........................
ET0046253      <-- ........................
CT0037883      <-- ........................
ET0144458      <-- ........................
ET0126325      <-- ........................
ET0015631      <-- ........................
CT0106962      <-- ........................
ET0096101      <-- ........................
CT0028045      <-- ........................
ET0021887      <-- ........................
ET0010954      <-- ........................
ET0027396      <-- ........................
CT0008737      <-- ........................
ET0107086      <-- ........................
CT0081111      <-- ........................
ET0129214      <-- ........................
ET0030944      <-- ........................
CT0000505      <-- ........................
ET0141242      <-- ........................
CT0069545      --> ........................
CT0012585      --> ........................
ET0130256      --> ........................
CT0034823      --> ........................
CT0035028      --> ........................
CT0040242      --> ........................
CT0040990      --> ........................
CT0045511      --> ........................
CT0038575      --> ........................
ET0080664      --> ........................
CT0103778      --> ........................
CT0068038      --> ........................
ET0109388      --> ........................
CT0071711      --> ........................
ET0066430      --> ........................
RH04C85        --> ........................
RH06C228       --> ........................
CT0044783      --> ........................
ET0071853      --> ........................
CT0042280      --> TGCTTGGCAATGCATTTATTAAAA