1 - 51
RU05048 --> TTTTTTTTAAGAAAGAAATTAAACTAGGAAAATAAAAACCAA-GTAAAAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ..................................................
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> TTTTTTTTAAGAAAGAAATTAAACTAGGAAAATAAAAACCAAAGTAAAAA
CT0113448 --> .........tttttttttgagattactggAAATAAAAACCAAAGTAAAAA
CT0113481 --> ..................gagattactggAAATAAAAACCAAAGTAAAAA
CT0115081 --> ..........ttttttttgagattactggAAATAAAACCAAA-GTAAAAA
CT0113879 --> ..........tttttttttgagattactggAATAAAAACCAAAGTAAAAA
CT0114734 --> ..........tttttttttgagattactggAATAAAACCAAA-GTAAAAA
CT0114914 --> ......tttttttttagtaagattaactggAATAAAAACCAAAGTAAAAA
CT0115449 --> ...................gagattactggAATAAAACCAAA-GTAAAAA
CT0115513 --> .......tttttttttgtagatttacttggAATAAAAACCAA-GTAAAAA
CT0115666 --> ..........tttttttttgagattactggAATAAAACCAAA-GTAAAAA
CT0115802 --> ..........tttttttttgagattactggAATAAAACCAAA-GTAAAAA
CT0117059 --> ...................gagattactggAATAAAAACCAA-GTAAAAA
CT0110906 --> ..........tttttttttgtagattactggaatAAAACCAA-GTAAAAA
CT0111047 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0111541 --> ............ttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0111712 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0111965 --> .................gtagtatttactggaatAAAACCAA-GTAAAAA
CT0112496 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0112704 --> ...................gtagattactggaatAAAACCAA-GTAAAAA
CT0112807 --> ..........tttttttttgtagattactggaatAAAACCAA-GTAAAAA
CT0112916 --> ..................gtagtattactggaatAAAACCAA-GTAAAAA
CT0113005 --> ....................gagattactggaatAAAACCAA-GTAAAAA
CT0113110 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0113113 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0113173 --> ...................gtagattactggaatAAAACCAA-GTAAAAA
CT0113597 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0113718 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0113778 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0114061 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0114141 --> ..................agtatttacttggaatAAAACCAA-GTAAAAA
CT0114291 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0114355 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0114364 --> ....................gagattactggaatAAAACCAA-GTAAAAA
CT0114459 --> ..........tttttttttgtagattactggaatAAAACCAA-GTAAAAA
CT0114521 --> .................gtagtatttactggaatAAAACCAA-GTAAAAA
CT0114618 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0114724 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0114772 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0114803 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0114875 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0115018 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0115028 --> ....................gagattactggaatAAAACCAA-GTAAAAA
CT0115080 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0115106 --> ..........tttttttttgtagattactggaatAAAACCAA-GTAAAAA
CT0115198 --> ....................gagattactggaatAAAACCAA-GTAAAAA
CT0115464 --> ..........tttttttttgagattactggtaatAAAACCAA-GTAAAA-
CT0115557 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0115655 --> ....................gagattactggaatAAAACCAA-GTAAAAA
CT0115661 --> ............ttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0115665 --> ...............agtaagtatttactggaatAAAACCAA-GTAAAAA
CT0115683 --> .................gtagtatttactggaatAAAACCAA-GTAAAAA
CT0116089 --> ....................gagattactggaatAAAACCAA-GTAAAAA
CT0116197 --> .................gtagtatttactggaatAAAACCAA-GTAAAAA
CT0116203 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0116233 --> ..................................AAAACCAA-GTAAAAA
CT0116237 --> ..........tttttttttgtagattactggaatAAAACCAA-GTAAAAA
CT0116555 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0116749 --> .................agtatttacttggtaatAAAACCAA-GTAAAAA
CT0117049 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
CT0117249 --> ..................gtagatttactggaatAAAACCAA-GTAAAA-
CT0117377 --> ...........tttttttttgagattactggaatAAAACCAA-GTAAAAA
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
51 - 101
RU05048 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ..................................................
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ACCAAGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113448 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113481 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115081 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113879 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114734 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114914 --> ACCAAGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115449 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115513 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115666 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115802 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0117059 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0110906 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0111047 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0111541 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0111712 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0111965 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0112496 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0112704 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0112807 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0112916 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113005 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113110 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113113 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113173 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113597 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113718 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0113778 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114061 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114141 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114291 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114355 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114364 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTT-GGTG
CT0114459 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114521 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114618 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114724 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114772 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114803 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0114875 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115018 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115028 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115080 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115106 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115198 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115464 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115557 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115655 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115661 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115665 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0115683 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0116089 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0116197 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0116203 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0116233 --> ACC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0116237 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0116555 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0116749 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0117049 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0117249 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
CT0117377 --> -CC-AGGGTATCAACTGAGTGAGAGACAACAAGTTGTTGGCTCTTCGGTG
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
101 - 151
RU05048 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ..................................................
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113448 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113481 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115081 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113879 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114734 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114914 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115449 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115513 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115666 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115802 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0117059 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0110906 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0111047 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0111541 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0111712 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0111965 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0112496 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0112704 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0112807 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0112916 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113005 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113110 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113113 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113173 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113597 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113718 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0113778 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114061 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114141 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114291 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114355 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114364 --> TTCAGGATCA-AGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114459 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAAACCTACATATATTAATAT
CT0114521 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114618 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114724 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114772 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114803 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0114875 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115018 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115028 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115080 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115106 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115198 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115464 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115557 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115655 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115661 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115665 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0115683 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0116089 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0116197 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0116203 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0116233 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0116237 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0116555 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0116749 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0117049 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0117249 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
CT0117377 --> TTCAGGATCACAGAGAATTATTGAAGCTCAAA-CCTACATATATTAATAT
ET0006322 --> .............tttttttTTGAAGCTCAAA-CCTACATATATTAATAT
ET0122587 --> .............tttttttTTGAAGCTCAAA-CCTACATATATTAATAT
ET0124993 --> ............atttttttTTGAAGCTCAAA-CCTACATATATTAATAT
ET0126760 --> .............tttttttTTGAAGCTCAAA-CCTACATATATTAATAT
CT0127485 --> ......................GAAGCTCAAA-CCTACATATATTAATAT
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
151 - 201
RU05048 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ..................................................
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113448 --> TTTTTGTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113481 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115081 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113879 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114734 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114914 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115449 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115513 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115666 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115802 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0117059 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0110906 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0111047 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0111541 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0111712 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0111965 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0112496 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0112704 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0112807 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0112916 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113005 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113110 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113113 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113173 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113597 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113718 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0113778 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114061 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114141 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114291 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114355 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114364 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114459 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTA............
CT0114521 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114618 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114724 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114772 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114803 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0114875 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115018 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115028 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115080 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115106 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTTTGT
CT0115198 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115464 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115557 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115655 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115661 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115665 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0115683 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0116089 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0116197 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0116203 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0116233 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0116237 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0116555 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0116749 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0117049 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0117249 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0117377 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
ET0006322 --> TTTT-GTCACAAGATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
ET0122587 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
ET0124993 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
ET0126760 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0127485 --> TTTT-GTCACAAAATATATAACAGTACAATGGTGCTTAGACCGATTT-GT
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
201 - 251
RU05048 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- .........................................ATGCTTCAA
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113448 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113481 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115081 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113879 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114734 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114914 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115449 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115513 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115666 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115802 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0117059 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0110906 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0111047 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0111541 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0111712 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0111965 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0112496 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0112704 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0112807 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0112916 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113005 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113110 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113113 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113173 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113597 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113718 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0113778 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114061 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114141 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114291 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114355 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114364 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114459 --> ..................................................
CT0114521 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114618 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114724 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114772 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114803 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0114875 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115018 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115028 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115080 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115106 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115198 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115464 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115557 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115655 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115661 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115665 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0115683 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0116089 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0116197 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0116203 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0116233 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0116237 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0116555 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0116749 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0117049 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0117249 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0117377 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
ET0006322 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
ET0122587 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
ET0124993 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
ET0126760 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0127485 --> GAATGATTCATTAGTGACCGGTATCTACAATTTCATCCTGGATGCTTCAA
CT0096566 --> ....................................CCTGGATGCTTCAA
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
251 - 301
RU05048 --> ACTTTAGACATTGTGTAGTCCATTGCATCCACAAGAAAATCTGCATCTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ACTTTAGACATTGTGTAGTCCATTGCATCCACAAGAAAATCTGCATCTTT
ET0128023 <-- ...................................AAAATCTGCATCTTC
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ACTTTAGACATTGTGTAG................................
CT0113448 --> ACTTTAGACATTGTGTAG................................
CT0113481 --> ACTTTAGACATTGTGTAGT...............................
CT0115081 --> ACTTTAGACATTGTGTAGT...............................
CT0113879 --> ACTTTAGACATTGTGTAGT...............................
CT0114734 --> ACTTTAGACATTGTGTAGT...............................
CT0114914 --> ACTTTAGACATTGTGTAGTC..............................
CT0115449 --> ACTTTAGACATTGTGTAGT...............................
CT0115513 --> ACTTTAGACATTGTGTAG................................
CT0115666 --> ACTTTAGACATTGTGTAGTC..............................
CT0115802 --> ACTTTAGACATTGTGTAGT...............................
CT0117059 --> ACTTTAGACATTGTGTAG................................
CT0110906 --> ACTTTAGACATTGTGTAGT...............................
CT0111047 --> ACTTTAGACATTGTGTAGT...............................
CT0111541 --> ACTTTAGACATTGTGTAGT...............................
CT0111712 --> ACTTTAGACATTGTGTAGT...............................
CT0111965 --> ACTTTAGACATTGTGTAGT...............................
CT0112496 --> ACTTTAGACATTGTGTAGT...............................
CT0112704 --> ACTTTAGACATTGTGTAGT...............................
CT0112807 --> ACTTTAGACATTGTGTAGT...............................
CT0112916 --> ACTTTAGACATTGTGTA.................................
CT0113005 --> ACTTTAGACATTGTGTAGT...............................
CT0113110 --> ACTTTAGACATTGTGTAGT...............................
CT0113113 --> ACTTTAGACATTGTGTAGTC..............................
CT0113173 --> ACTTTAGACATTGTGTAGT...............................
CT0113597 --> ACTTTAGACATTGTGTAGT...............................
CT0113718 --> ACTTTAGACATTGTGTAGT...............................
CT0113778 --> ACTTTAGACATTGTGTAGT...............................
CT0114061 --> ACTTTAGACATTGTGTAGT...............................
CT0114141 --> ACTTTAGACATTGTGTAGT...............................
CT0114291 --> ACTTT-GACATTGTGTAGT...............................
CT0114355 --> ACTTTAGACATTGTGTAGTC..............................
CT0114364 --> ACTTTAGACATTGTGTAGTC..............................
CT0114459 --> ..................................................
CT0114521 --> ACTTTAGACATTGTGTAG................................
CT0114618 --> ACTTTAGACATTGTGTAGT...............................
CT0114724 --> ACTTTAGACATTGTGTAGT...............................
CT0114772 --> ACTTTAGACATTGTGTAGT...............................
CT0114803 --> ACTTTAGACATTGTGTAGT...............................
CT0114875 --> ACTTTAGACATTGTGTAG................................
CT0115018 --> ACTTTAGACATTGTGTAGT...............................
CT0115028 --> ACTTTAGACATTGTGTAGT...............................
CT0115080 --> ACTTTAGACATTGTGTAGT...............................
CT0115106 --> ACTTTAGACATTGTGTA.................................
CT0115198 --> ACTTTAGACATTGTGTAGT...............................
CT0115464 --> ACTTTAGACATTGTGTAGT...............................
CT0115557 --> ACTTTAGACATTGTGTAGT...............................
CT0115655 --> ACTTTAGACATTGTGTAGT...............................
CT0115661 --> ACTTTAGACATTGTGTAGT...............................
CT0115665 --> ACTTTAGACATTGTGTAGT...............................
CT0115683 --> ACTTTAGACATTGTGTA.................................
CT0116089 --> ACTTTAGACATTGTGTAGT...............................
CT0116197 --> ACTTTAGACATTGTGTAGT...............................
CT0116203 --> ACTTTAGACATTGTGTAGT...............................
CT0116233 --> ACTTTAGACATTGTGTAGT...............................
CT0116237 --> ACTTTAGACATTGTGTAGT...............................
CT0116555 --> ACTTTAGACATTGTGTAGT...............................
CT0116749 --> ACTTTAGACATTGTGTAGT...............................
CT0117049 --> ACTTTAGACATTGTGTAGT...............................
CT0117249 --> ACTTTAGACATTGTGTAGT...............................
CT0117377 --> ACTTTAGACATTGTGTAGT...............................
ET0006322 --> ACTTTAGACATTGTGTAGTCCATTG.........................
ET0122587 --> ACTTTAGACATTGTGTAGTCCATTGCATCCACAAGAAAATCTGCATCTTT
ET0124993 --> ACTTTAGACATTGTGTAGTCCATTGCATCCACAAGAAAATCTGCATCTTT
ET0126760 --> ACTTTAG-CATTGTGTAGTCCATTGCATCCACAAGAAA-TCTGCATCTTT
CT0127485 --> ACTTTAGACATTGTGTAGTCCATTGCATCCACAAGAAAATCTGCATCTTT
CT0096566 --> ACTTTAGACATTGTGTAGTCCATTGCATCCACAAGAAAATCTGCATCTTC
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
301 - 351
RU05048 --> CTTAGTGAAGCACAAGGG--AGGTGTGATTCTGAAAA-CATTTCCATAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- CTTAGTGAAGCACAAGGG--AGGTGTGATTCTGAAAA-CATTTCCATAGA
ET0128023 <-- CTTAGTGAAGCACAAGGG--AGGTGTGATTCTGAAAAACATTTCCATAGA
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> CTTAGTGAAGCACAAGGG--AGGTGTGATTCTGAAAA-CATTTCCATAGA
ET0124993 --> CTTAGTGAAGCACAAGGG--AGGTGTGATTCTGAAAA-CATTTCCATAGA
ET0126760 --> CTTAGTGAAGCACAAGGGGTAGGTGTGATTCTGAAAA-CTTTTCCATAGA
CT0127485 --> CTTAGTGAAGCACAAGGG--AGGTGTGATTCTGAAAA-CATTTCCATAGA
CT0096566 --> CTTAGTGAAGCACAAGGG--AGGTGTGATTCTGAAAA-CATTTCCATAGA
CT0033604 --> ......................................CATTTCCATAGA
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
351 - 401
RU05048 --> ACCCACCTTTGCCGATCAAGACTCCCAAATCTTTCATTTTGTCCATCACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ACCCACCTTTGCCGATCAAGACTCCCAAATCTTTCATTTTGTCCATCACA
ET0128023 <-- ACCC..............................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ACCCACCTTTGCCGA...................................
ET0124993 --> ACCCAC-TTTGCCGA...................................
ET0126760 --> cc................................................
CT0127485 --> ACCCACCTTTGCC.....................................
CT0096566 --> ACCCACCTTTGCCGATCAAGACTCCCAAATCTTTCATTTTGTCCATCACA
CT0033604 --> ACCCACCTTTGCCGATCAAGACTCCCAAATCTTTCATTTTGTCCATCACA
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
401 - 451
RU05048 --> TGTATAGTTTCAGCCTTGGCTGGTGTTTTCAGTTGACGGTCAGTCACAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- TGTATAGTTTCAGCCTTGGCTGGTGTTTTCAGTTGACGGTCAGTCACAAG
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> TGTATAGTTTCAGCCTTGGCTGGTGTTTTCAGTTGACGGTCAGTCACAAG
CT0033604 --> TGTATAGTTTCAGCCTTGGCTGGTGTTTTCAGTTGACGGTCAGTCACAAG
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
451 - 501
RU05048 --> TTCAACTCCAAGCATAAATCCTTTTCCCCTCACATCCCCAATAAGTTCAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- TTCAACTCCAAGCATAAATCCTTTTCCCCTCACATCCCCAATAAGTTCAT
ET0128023 <-- ..................................................
CT0128754 <-- ..................TCCTTTTCCCCTCACATCCCCAATAAGTTCAT
CT0133867 <-- ..................TCCTTTTCCCCTCACATCCCCAATAAGTTCAT
CT0134130 <-- ..................TCCTTTTCCCCTCACATCCCCAATAAGTTCAT
CT0134388 <-- ..................TCCTTTTCCCCTCACATCCCCAATAAGTTCAT
CT0136311 <-- ..................TCCTTTTCCCCTCACATCCCCAATAAGTTCAT
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> TTCAACTCCAAGCATTAATCCTTTccc.......................
CT0033604 --> TTCAACTCCAAGCATAAATCCTTTTCCCCTCACATCCCCAATAAGTTCAT
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
501 - 551
RU05048 --> ATTTATCCTTAAGGGCAGTGAGTCTTTCTTTCAGATAAGAGCCCACAACG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ATTTATCCTTAAGGGCAGTGAGTCTTTCTTTCAGATAAGAGCCCACAACG
ET0128023 <-- ..................................................
CT0128754 <-- ATTTATCCTTAAGGGCAGTGAGTCTTTCTTTCAGATAAGAGCCCACAACG
CT0133867 <-- ATTTATCCTTAAGGGCAGTGAGTCTTTCTTTCAGATAAGAGCCCACAACG
CT0134130 <-- ATTTATCCTTAAGGGCAGTGAGTCTTTCTTTCAGATAAGAGCCCACAACG
CT0134388 <-- ATTTATCCTTAAGGGCAGTGAGTCTTTCTTTCAGATAAGAGCCCACAACG
CT0136311 <-- ATTTATCCTTAAGGGCAGTGAGTCTTTCTTTCAGATAAGAGCCCACAACG
CT0107386 <-- .................................................G
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ATTTATCCTTAAGGGCAGTGAGTCTTTCTTTCAGATAAGAG.........
ET0004642 --> ...........AGGGCAGTGAGTCTTTCTTTCAGATAAGAGCCCACAACG
ET0144059 --> ..............................TCAGATAAGAGCCCACAACG
ET0144887 --> ..............................TCAGATAAGAGCCCACAACG
ET0145106 --> ..............................TCAGATAAGAGCCCACAACG
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
551 - 601
RU05048 --> AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
ET0128023 <-- ..................................................
CT0128754 <-- AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
CT0133867 <-- AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
CT0134130 <-- AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
CT0134388 <-- AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
CT0136311 <-- AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
CT0107386 <-- AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
CT0006289 <-- .......TTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
ET0144059 --> AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
ET0144887 --> AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
ET0145106 --> AATGCATTTTCTTGAAGTCCTTCTTTCTCTATCACTTTCAGAACAGCCAG
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
601 - 651
RU05048 --> TCCTGCAGCTGTGCATACAGGATTGCCACCAAAGGTGTTAAAGTAATTGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- TCCTGCAGCTGTGCATACAGGATTGCCACCAAAGGTGTTAAAGTAATTGC
ET0128023 <-- ..................................................
CT0128754 <-- TCCTGCAGCTGTGCATAC................................
CT0133867 <-- TCCTGCAGCTGTGCATAC................................
CT0134130 <-- TCCTGCAGCTGTGCATAC................................
CT0134388 <-- TCCTGCAGCTGTGCATAC................................
CT0136311 <-- TCCTGCAGCTGTGCATAC................................
CT0107386 <-- TCCTGCAGCTGTGCATACAGGATTGCCACCAAAGGTGTTAAAGTAATTGC
CT0006289 <-- TCCTGCAGCTGTGCATACAGGATTGCCACCAAAGGTGTTAAAGTAATTGC
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> TCCTGCAGCTGTGCATACAGG.............................
ET0144059 --> TCCTGCAGCTGTGCATACAGGATTGCCACCAAAGGTGTTAAAGTAATTGC
ET0144887 --> TCCTGCAGCTGTGCATACAGGATTGCCACCAAAGGTGTTAAAGTAATTGC
ET0145106 --> TCCTGCAGCTGTGCATACAGGATTGCCACCAAAGGTGTTAAAGTAATTGC
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
651 - 701
RU05048 --> GGCGGGTCAAGACCTCTGCAACCTCAGGAGTGGTTACCACAGCACCAAGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- GGCGCGTCAAGACCTCTGCAACCTCAGGAGTGGTTACCACAGCACCAAGG WaterDS
ET0128023 <-- .................................................. Ethylene
CT0128754 <-- .................................................. Control
CT0133867 <-- .................................................. Control
CT0134130 <-- .................................................. Control
CT0134388 <-- .................................................. Control
CT0136311 <-- .................................................. Control
CT0107386 <-- GGCGGGTCAAGACCTCTGCAACCTCAGGAGTGGTTACCACAGCACCAAGG Control
CT0006289 <-- GGCGGGTCAAGACCTCTGCAACCTCAGGAGTGGTTACCACAGCACCAAGG Control
CT0129437 <-- .................................................. Control
CT0136371 <-- .................................................. Control
ET0126720 <-- .................................................. Ethylene
CT0060210 <-- .................................................. Control
CT0115297 --> .................................................. Control
CT0113448 --> .................................................. Control
CT0113481 --> .................................................. Control
CT0115081 --> .................................................. Control
CT0113879 --> .................................................. Control
CT0114734 --> .................................................. Control
CT0114914 --> .................................................. Control
CT0115449 --> .................................................. Control
CT0115513 --> .................................................. Control
CT0115666 --> .................................................. Control
CT0115802 --> .................................................. Control
CT0117059 --> .................................................. Control
CT0110906 --> .................................................. Control
CT0111047 --> .................................................. Control
CT0111541 --> .................................................. Control
CT0111712 --> .................................................. Control
CT0111965 --> .................................................. Control
CT0112496 --> .................................................. Control
CT0112704 --> .................................................. Control
CT0112807 --> .................................................. Control
CT0112916 --> .................................................. Control
CT0113005 --> .................................................. Control
CT0113110 --> .................................................. Control
CT0113113 --> .................................................. Control
CT0113173 --> .................................................. Control
CT0113597 --> .................................................. Control
CT0113718 --> .................................................. Control
CT0113778 --> .................................................. Control
CT0114061 --> .................................................. Control
CT0114141 --> .................................................. Control
CT0114291 --> .................................................. Control
CT0114355 --> .................................................. Control
CT0114364 --> .................................................. Control
CT0114459 --> .................................................. Control
CT0114521 --> .................................................. Control
CT0114618 --> .................................................. Control
CT0114724 --> .................................................. Control
CT0114772 --> .................................................. Control
CT0114803 --> .................................................. Control
CT0114875 --> .................................................. Control
CT0115018 --> .................................................. Control
CT0115028 --> .................................................. Control
CT0115080 --> .................................................. Control
CT0115106 --> .................................................. Control
CT0115198 --> .................................................. Control
CT0115464 --> .................................................. Control
CT0115557 --> .................................................. Control
CT0115655 --> .................................................. Control
CT0115661 --> .................................................. Control
CT0115665 --> .................................................. Control
CT0115683 --> .................................................. Control
CT0116089 --> .................................................. Control
CT0116197 --> .................................................. Control
CT0116203 --> .................................................. Control
CT0116233 --> .................................................. Control
CT0116237 --> .................................................. Control
CT0116555 --> .................................................. Control
CT0116749 --> .................................................. Control
CT0117049 --> .................................................. Control
CT0117249 --> .................................................. Control
CT0117377 --> .................................................. Control
ET0006322 --> .................................................. Ethylene
ET0122587 --> .................................................. Ethylene
ET0124993 --> .................................................. Ethylene
ET0126760 --> .................................................. Ethylene
CT0127485 --> .................................................. Control
CT0096566 --> .................................................. Control
CT0033604 --> .................................................. Control
ET0004642 --> .................................................. Ethylene
ET0144059 --> GGCGCGTCAAGACCTCTGCAACCTCAGGAGTGGTT............... Ethylene
ET0144887 --> GGCGCGTCAAGACCTCTGCAACCTCAGGAGTGGTTA.............. Ethylene
ET0145106 --> GGCGCGTCAAGACCTCTGCAACCTCAGGAGTGGTTA.............. Ethylene
CT0088813 --> .................................................. Control
CT0017326 --> .................................................. Control
CT0056808 --> .................................................. Control
ET0083614 --> .................................................. Ethylene
ET0021427 --> .................................................. Ethylene
701 - 751
RU05048 --> GGAATGCCGTTTCCAATGCTCTTGGCCATTGTCACAATGTCAGGCACAAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- GGAATGCCGTTTCCAATGCTCTTGGCCATTGTCACAATGTCAGGCACAAC
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- GGAATGCCATTTCCAATGCTCTTGGCCATTGTCACAATGTCAGGCACAAC
CT0006289 <-- GGAATGCCATTTCCAATGCTCTTGGCCATTGTCACAATGTCAGGCACAAC
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> ..................................................
751 - 801
RU05048 --> ACCATGGCCCTCAAAACCCCAGAAGTTGCTTCCT-GTGCGAGCAAAACCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ACCATGGCCCTCAAAACCCCAGAAGTTGCTTCCT-GTGCGAGCAAAACCA
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ACCATGGCCCTCAAAAC.................................
CT0006289 <-- ACCATGGCCCTCAAAACCCCAGAAGTTGCTTCCTCGTGCGAG........
CT0129437 <-- .................................T-GTGCGAGCAAAACCA
CT0136371 <-- ...................................GTGCGAGCAAAACCA
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> .CCATGGCCCTCAAAACCCCAGAAGTTGCTTCCT-GTGCGAGCAAAACCA
CT0017326 --> ............................CTTCCT-GTGCGAGCAAAACCA
CT0056808 --> ............................CTTCCT-GTGCGAGCAAAACCA
ET0083614 --> ..................................................
ET0021427 --> ..................................................
801 - 851
RU05048 --> GACTGGACCTCATCAGCGATGAAAAGGCCTCCTG-CTTTTTTTACACTAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- GACTGGACCTCATCAGCGATGAAAAGGCCTCCTG-CTTTTTTTACACTAT
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- GACTGGACCTCATCAGCGATGAAAAGGCCTCCTG-CTTTTTTTACACTAT
CT0136371 <-- GACTGGACCTCATCAGCGATGAAAAGGCCTCCTG-CTTTTTTTACACTAT
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> GACTGGACCTCATCAGCGATGAAAAGGCCTCCTGTCTTTTTTTACACTAT
CT0017326 --> GACTGGACCTCATCAGCGATGAAAAGGCCTCCTG-CTTTTTTTACACTAT
CT0056808 --> GACTGGACCTCATCAGCGATGAAAAGGCCTCCTG-CTTTTTTTACACTAT
ET0083614 --> ..................................................
ET0021427 --> ..................................................
851 - 901
RU05048 --> TATAAACTGCTGGCAAATAACCTGGGGCCAATTCTACAATTCCCCC-TAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- TATAAACTGCTGGCAAATAACCTGGGGCCAATTCTACAATTCCCCC-TAC
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- TATAAACTGCTGGCAAATAACCTGGGGCCAATTCTACAATTCCCCC-TAC
CT0136371 <-- TATAAACTGCTGGCAAATAACCTGGGGCCAATTCTACAATTCCCCC-TAC
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> TATAAACGGCTGGCAAATAACCCGGGGCCAATTCTACAATTCCCCC-TAC
CT0017326 --> TATAAACTGCTGGCAAATAACCTGGGGCCAATTCTACAATTCCCCC-TAC
CT0056808 --> TATAAACTGCTGGCAAATAACCTGGGGCCAATTCTACAATTCCCCC-TAC
ET0083614 --> ..............................ATTCTACAATTCCCCCCTAC
ET0021427 --> ..................................................
901 - 951
RU05048 --> TCCC-TGTATGGCTTCAGATATAAAGGCAGCAACATGGCCAGAAGTTCCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- TCTC-TGTATGGCTTCAGATATAAAGGCAGCAACATGGCCAGAA......
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- TCCC-TGTATGGCTTCAGATATAAAGGCAGCAACATGGCCAGAAGTTCCA
CT0136371 <-- TCCC-TGTATGGCTTCAGATATAAAGGCAGCAACATGGCCAGAAGTTCCA
ET0126720 <-- ..................................................
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> TCCC-TGTATGGCTTCAGATATAAAGGCAGCAACACGGCCAGAAGTTCCA
CT0017326 --> TCCC-TGTATGGCTTCAGATATAAAGGCAG....................
CT0056808 --> TCCC-TGTATGGCTTCAGATATAAAGGCAG....................
ET0083614 --> TCCCCTGTATGGCTTCAGATATAAAGGCAGCAACATGGCCAGAAGTTCCA
ET0021427 --> ..................................................
951 - 1001
RU05048 --> AAGTCAATGAGATCTTGGACATCTTT--GGCATACTTCTCACCATCTGAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ..................................................
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- AAGTCAATGAGATCTTGGACATCTT.........................
CT0136371 <-- AAGTCAATGAGATCTTGGACATtc..........................
ET0126720 <-- .............CTTGGACATCTTTTGGGCATACTTCTCACCATCTGAA
CT0060210 <-- ..................................................
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> AAGTCAATGAGATCTTGGACATCTTT--GGCATACTTCTCACCATCTGAA
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> AAATCAATGAGATCTTGGACATCTTT--GGCATACTTCTCACCATCTGAA
ET0021427 --> ..................................................
1001 - 1051
RU05048 --> CCAAATACACCTCTGTATGGGTCTGGATTCATGGCATGATGAACTCCACT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ..................................................
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- CCAAATACACCTCTGTATGGGTCTGGATTCATGGCATGATGAACTCCACT
CT0060210 <-- .....................cgTGGATTCATGGCATGATGAACTCCACT
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> CCAAATACA.........................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> CCAAATACACCTCTGTATGGGTCTGGATTCATGGCATGATGAACTCCACT
ET0021427 --> ..................................................
1051 - 1101
RU05048 --> CTGAATGACGTTAAATTTCCAGTTGGCCTGGGCAGTGGCTCCCATAGTGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ..................................................
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- CTGAATGACGTTAAATTTCCAGTTGGCCTGGGCAGTGGCTCCCATAGTGC
CT0060210 <-- CTGAATGACGTTAAATTTCCAGTTGGCCTGGGCAGTGGCGCCCATAGTGC
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> CTGAATGACGTTAAATTTCCAGTTGGCCTGGGCAGTGGCGCCCATAGTGC
ET0021427 --> ..................................................
1101 - 1151
RU05048 --> CAGCAGCGTTGCCATGATATGCGTTTCTCAAAGAGATTATGTCATGGCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ..................................................
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- CAGCAGCGTTGCCATGATA...............................
CT0060210 <-- CAGCAGCGTTGCCATGATATGCGTTTCTCAAAGAGATTATGTCATGGCAG
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> CAGCAGCGT.........................................
ET0021427 --> ...................TGCGTTTCTCAAAGAGATTATGTCATGGCAG
1151 - 1201
RU05048 --> CCAGTGTACAACCTCGCTATCAACATCGCCAACTCGTTTGCTTCCGTCCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ..................................................
ET0128023 <-- ..................................................
CT0128754 <-- ..................................................
CT0133867 <-- ..................................................
CT0134130 <-- ..................................................
CT0134388 <-- ..................................................
CT0136311 <-- ..................................................
CT0107386 <-- ..................................................
CT0006289 <-- ..................................................
CT0129437 <-- ..................................................
CT0136371 <-- ..................................................
ET0126720 <-- ..................................................
CT0060210 <-- CCAGTGTACAACCTCGCTATCAACATCGCCAACTCGTTTGCTTCCGTCCC
CT0115297 --> ..................................................
CT0113448 --> ..................................................
CT0113481 --> ..................................................
CT0115081 --> ..................................................
CT0113879 --> ..................................................
CT0114734 --> ..................................................
CT0114914 --> ..................................................
CT0115449 --> ..................................................
CT0115513 --> ..................................................
CT0115666 --> ..................................................
CT0115802 --> ..................................................
CT0117059 --> ..................................................
CT0110906 --> ..................................................
CT0111047 --> ..................................................
CT0111541 --> ..................................................
CT0111712 --> ..................................................
CT0111965 --> ..................................................
CT0112496 --> ..................................................
CT0112704 --> ..................................................
CT0112807 --> ..................................................
CT0112916 --> ..................................................
CT0113005 --> ..................................................
CT0113110 --> ..................................................
CT0113113 --> ..................................................
CT0113173 --> ..................................................
CT0113597 --> ..................................................
CT0113718 --> ..................................................
CT0113778 --> ..................................................
CT0114061 --> ..................................................
CT0114141 --> ..................................................
CT0114291 --> ..................................................
CT0114355 --> ..................................................
CT0114364 --> ..................................................
CT0114459 --> ..................................................
CT0114521 --> ..................................................
CT0114618 --> ..................................................
CT0114724 --> ..................................................
CT0114772 --> ..................................................
CT0114803 --> ..................................................
CT0114875 --> ..................................................
CT0115018 --> ..................................................
CT0115028 --> ..................................................
CT0115080 --> ..................................................
CT0115106 --> ..................................................
CT0115198 --> ..................................................
CT0115464 --> ..................................................
CT0115557 --> ..................................................
CT0115655 --> ..................................................
CT0115661 --> ..................................................
CT0115665 --> ..................................................
CT0115683 --> ..................................................
CT0116089 --> ..................................................
CT0116197 --> ..................................................
CT0116203 --> ..................................................
CT0116233 --> ..................................................
CT0116237 --> ..................................................
CT0116555 --> ..................................................
CT0116749 --> ..................................................
CT0117049 --> ..................................................
CT0117249 --> ..................................................
CT0117377 --> ..................................................
ET0006322 --> ..................................................
ET0122587 --> ..................................................
ET0124993 --> ..................................................
ET0126760 --> ..................................................
CT0127485 --> ..................................................
CT0096566 --> ..................................................
CT0033604 --> ..................................................
ET0004642 --> ..................................................
ET0144059 --> ..................................................
ET0144887 --> ..................................................
ET0145106 --> ..................................................
CT0088813 --> ..................................................
CT0017326 --> ..................................................
CT0056808 --> ..................................................
ET0083614 --> ..................................................
ET0021427 --> CCAGTGTACAACCTCGCTATCAACATCGCCAACTCGTTTGCTTCCGTCCC
1201 - 1251
RU05048 --> TGAATTAGTGAAGAACACTACCTTGAGATTGGCGGGCAACTTGGAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH33AK35 <-- ...............................................
ET0128023 <-- ...............................................
CT0128754 <-- ...............................................
CT0133867 <-- ...............................................
CT0134130 <-- ...............................................
CT0134388 <-- ...............................................
CT0136311 <-- ...............................................
CT0107386 <-- ...............................................
CT0006289 <-- ...............................................
CT0129437 <-- ...............................................
CT0136371 <-- ...............................................
ET0126720 <-- ...............................................
CT0060210 <-- TGAATTAGTGAAGAACACTACCTTGAGATTGGCGGGCAACTTGGAAG
CT0115297 --> ...............................................
CT0113448 --> ...............................................
CT0113481 --> ...............................................
CT0115081 --> ...............................................
CT0113879 --> ...............................................
CT0114734 --> ...............................................
CT0114914 --> ...............................................
CT0115449 --> ...............................................
CT0115513 --> ...............................................
CT0115666 --> ...............................................
CT0115802 --> ...............................................
CT0117059 --> ...............................................
CT0110906 --> ...............................................
CT0111047 --> ...............................................
CT0111541 --> ...............................................
CT0111712 --> ...............................................
CT0111965 --> ...............................................
CT0112496 --> ...............................................
CT0112704 --> ...............................................
CT0112807 --> ...............................................
CT0112916 --> ...............................................
CT0113005 --> ...............................................
CT0113110 --> ...............................................
CT0113113 --> ...............................................
CT0113173 --> ...............................................
CT0113597 --> ...............................................
CT0113718 --> ...............................................
CT0113778 --> ...............................................
CT0114061 --> ...............................................
CT0114141 --> ...............................................
CT0114291 --> ...............................................
CT0114355 --> ...............................................
CT0114364 --> ...............................................
CT0114459 --> ...............................................
CT0114521 --> ...............................................
CT0114618 --> ...............................................
CT0114724 --> ...............................................
CT0114772 --> ...............................................
CT0114803 --> ...............................................
CT0114875 --> ...............................................
CT0115018 --> ...............................................
CT0115028 --> ...............................................
CT0115080 --> ...............................................
CT0115106 --> ...............................................
CT0115198 --> ...............................................
CT0115464 --> ...............................................
CT0115557 --> ...............................................
CT0115655 --> ...............................................
CT0115661 --> ...............................................
CT0115665 --> ...............................................
CT0115683 --> ...............................................
CT0116089 --> ...............................................
CT0116197 --> ...............................................
CT0116203 --> ...............................................
CT0116233 --> ...............................................
CT0116237 --> ...............................................
CT0116555 --> ...............................................
CT0116749 --> ...............................................
CT0117049 --> ...............................................
CT0117249 --> ...............................................
CT0117377 --> ...............................................
ET0006322 --> ...............................................
ET0122587 --> ...............................................
ET0124993 --> ...............................................
ET0126760 --> ...............................................
CT0127485 --> ...............................................
CT0096566 --> ...............................................
CT0033604 --> ...............................................
ET0004642 --> ...............................................
ET0144059 --> ...............................................
ET0144887 --> ...............................................
ET0145106 --> ...............................................
CT0088813 --> ...............................................
CT0017326 --> ...............................................
CT0056808 --> ...............................................
ET0083614 --> ...............................................
ET0021427 --> TGAATTAGTGAAGAACACTA...........................
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