SNPs of unigene RU05074
               1      -     51
RU05074        --> TGGACTTGCAGCTCTTACAAGTTTGACCAGATTGACGCACCTGGATCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..............................................CTGT
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> TGGACTTGCAGCTCTTACAAGTTTGACCAGATTGACGCACCTGGATCTGT
ET0128330      --> ................................................GT
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               51     -    101
RU05074        --> TTGGAGCCC-GAATTACAGATTCTGGAACAAACTATCTACGAAGCTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- TTGGAGCCC-GAATTACAGATTCTGGAACAAACTATCTACGAAGCTTTAA
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> TTGGAGCCCCGAATTACAGATTCTGGAACAAACTATCTACGAAGCTTTAA
ET0128330      --> TTGGAGCCC-GAATTACAGATTCTGGAACAAACTATCTACGAAGCTTTAA
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               101    -    151
RU05074        --> AAACTTGAGGTCCCTAGAAATATGCGGTGGAGGATTGACAGATGCTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- AAACTTGAGGTCCCTAGAAATATGCGGTGGAGGATTGACAGATGCTGGAG
RH21X20        <-- ................................GATTGACAGATGCTGGAG
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> AAACTTGAGGTCCCTAGAAATATGCGGTGGAGGATTGACAGATGCTGGAG
ET0128330      --> AAACTTGAGGTCCCTAGAAATATGCGGTGGAGGATTGACAGATGCTGGAG
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               151    -    201
RU05074        --> TAAAGAATATTAAAGATCTTTCATCCTTGACCCTATTGAATCTATCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- TAAAGAATATTAAAGATCTTTCATCCTTGACCCTATTGAATCTATCACAA
RH21X20        <-- TAAAGAATATTAAAGATCTTTCATCCTTGACCCTATTGAATCTATCACAA
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> TAAAGAATATTAAAGATCTTTCATCCTTGACCCTATTGAATCTATCACAA
ET0128330      --> TAAAGAATATTAAAGATCTTTCATCCTTGACCCTATTGAATCTATCACAA
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               201    -    251
RU05074        --> AACTGCAACCTAACAGATAAAACCTTGGAGTTGATTTCTGGGCTCACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- AACTGCAACCTAACAGATAAAACCTTGGAGTTGATTTCTGGGCTCACAGG
RH21X20        <-- AACTGCAACCTAACAGATAAAACCTTGGAGTTGATTTCTGGGCTCACAGG
CT0007083      <-- .....CAACCTAACAGATAAAACCTTGGAGTTGATTTCTGGGCTCACAGG
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> AACTGCAACCTAACAGATAAAACCTTGGAGTTGATTTCTGGGCTCACAG.
ET0128330      --> AACTGCAACCTAACAGATAAAACCTTGGAGTTGATTTCTGGGCTCACAGG
ET0118100      --> .ACTGCAACCTAACAGATAAAACCTTGGAGTTGATTTCTGGGCTCACAGG
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               251    -    301
RU05074        --> ATTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCCACTCAGGACTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ATTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCC-CTCAGG-CTGC
RH21X20        <-- ATTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCCACTCAGGACTGC
CT0007083      <-- ATTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCCACTCAGGACTGC
ET0128362      <-- ATTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCCACTCAGGACTGC
ET0131901      <-- ATTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCCACTCAGGACTGC
ET0127528      <-- .TTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCCACTCAGGACTGC
ET0128980      <-- .TTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCCACTCAGGACTGC
CT0101036      <-- ..................................................
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ATTGGTCTCTTT......................................
ET0118100      --> ATTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCCACTCAGGACTGC
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               301    -    351
RU05074        --> GTCATTTGAAACTACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- GTC...............................................
RH21X20        <-- GTCATTTGAAACTACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGC
CT0007083      <-- GTCATTTGAAACTACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGC
ET0128362      <-- GTCATTTGAAACTACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGC
ET0131901      <-- GTCATTTGAAACTACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGC
ET0127528      <-- GTCATTTGAAACTACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGC
ET0128980      <-- GTCATTTGAAACTACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGC
CT0101036      <-- ..CATTTGAAACTACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGC
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> GTCATTTGAAACTACTTAAGAATTTGAAGTCTCTGACCTTGGAAGCCTGC
CT0010761      --> .............ACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGC
CT0093676      --> ..................................................

               351    -    401
RU05074        --> AAGGTGACTGCAAATGACATTAGGAAGCTTCAATTGACTGACCTTCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................  Control
RH21X20        <-- AAGGTGACTGCAAATGACATTAGGAAGCTTCAACTGACTGACCTTCCAAA  WaterDS
CT0007083      <-- AAGGTGACTGCAAATGAC................................  Control
ET0128362      <-- AAGGTGACTGCAAATGACATTAGGAAGCTTCAACTGACTGACCTTCCAAA  Ethylene
ET0131901      <-- AAGGTGACTGCAAATGACATTAGGAAGCTTCAACTGACTGACCTTCCAAA  Ethylene
ET0127528      <-- AAGGTGACTGCAAATGACATTAGGAAGCTTCAACTGACTGACCTTCCAAA  Ethylene
ET0128980      <-- AAGGTGACTGCAAATGACATTAGGAAGCTTCAACTGACTGACCTTCCAAA  Ethylene
CT0101036      <-- AAGGTGACTGCAAATGACATTAGGAAGCTTCAATTGACTGACCTTCCAAA  Control
RH22Y29        <-- ..................................................  WaterDS
ET0061196      <-- ..................................................  Ethylene
ET0123681      <-- ..................................................  Ethylene
CT0072607      <-- ..................................................  Control
ET0053784      <-- ..................................................  Ethylene
CT0078869      <-- ..................................................  Control
CT0037472      <-- ..................................................  Control
CT0097856      --> ..................................................  Control
ET0128330      --> ..................................................  Ethylene
ET0118100      --> AAGGTGACTGCAAATGACATTAGGAAGCTTCAACTGACTGACCTTCCAAA  Ethylene
CT0010761      --> AAGGTGACTGCAAATGACATTAGGAAGCTTCAATTGACTGACCTTCCAAA  Control
CT0093676      --> ..................................................  Control

               401    -    451
RU05074        --> TCTGGTAAGCTTCCGGCCTGAATAGTTGTGGAGGTAATTGAATCTGTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- TCTGGTAAGCTTCCGGCCTGAATAGTTGTGGAGGTAATTGAATCTGTAAC
CT0007083      <-- ..................................................
ET0128362      <-- TCTGGTAAGCTTCCGGCCTGAATAGTTGTGGAGGTAATTGAATCTGTAAC
ET0131901      <-- TCTGGTAAGCTTCCGGCCTGAATAGTTGTGGAGGTAATTGAATCTGTAAC
ET0127528      <-- TCTGGTAAGCTTCCGGCCTGAATAGTTGTGGAGGTAATTGAATCTGTAAC
ET0128980      <-- TCTGGTAAGCTTCCGGCCTGAATAGTTGTGGAGGTAATTGAATCTGTAAC
CT0101036      <-- TCTGGTAAGCTTCCGGCCTGAATAGTTGTGGAGGTAATTGAATCTGTAAC
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> TCTGGTAAGCTTCCGGCCTGAATAGTTGTGGAGGTAATTGA.........
CT0010761      --> TCTGGTAAGCTTCCGGCCTGAATAGTTGTGGAGGTAATTGAATCTGTAAC
CT0093676      --> ..................................................

               451    -    501
RU05074        --> TTTAAGCTTCTGGCAGCTTGGACAGACAGATAAGTGCATATAAAAGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- TTTAAGCTTCTGGCAGCTTGGACAGACAGAgatgt...............
CT0007083      <-- ..................................................
ET0128362      <-- TTTAAGCTTCTagg....................................
ET0131901      <-- TTTAAGCTTactagg...................................
ET0127528      <-- TTTAAGacttactaagg.................................
ET0128980      <-- TTTAAGacttactaagg.................................
CT0101036      <-- TTTAAGCTTCTGGCAGCTTGGACAGACAGATAAGTGCATATAAAAGGGGA
RH22Y29        <-- ...................................aCATATAAAAGGGGA
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> TTTAAGCTTCTGGCAGCTTGGACAGACAGATAAGTGCATATAAAAGGGGA
CT0093676      --> ..........................CAGAGATGTACATATAAAAGGGGA

               501    -    551
RU05074        --> GAGTTTGGGTAAATTGTAGATATGGTTGGATGTGGATGTGGATGTGGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- GAGTTTGGG.........................................
RH22Y29        <-- GAGTTTGGGTAAATTGTAGATATGGTTGGATGTGGATGTGGATGTGGATG
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> GAGTTTGGGTAAATTGTAGATATGGTTGGATGTGGATGTGGATGTGGATt
CT0093676      --> GAGTTTGGGTAAATTGTAGATATGGTTGGATGTGGATGTGGATGTGGATG

               551    -    601
RU05074        --> TGGATTTCCAAATGTCTCTTGAACTAAAAGATTGGAAGTTCTCTCTGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- TGGATTTCCAAATGTCTCTTGAACTAAAAGATTGGAAGTTCTCTCTGTGC
ET0061196      <-- ............................................CTGTGC
ET0123681      <-- ...............................................TGC
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> tccaag............................................
CT0093676      --> TGGATTTCCAAATGTCTCTTGAACTAAAAGATTGGAAGTTCTCTCTGTGC

               601    -    651
RU05074        --> TTCATGTGAAGCTCTCTTCCATGGTTGATTTTTGG-CATGGGAGAAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- TTCATGTGAAGCTCTCTTCCATGGTTGATTTTTGG-CATGGGAGAAAATG
ET0061196      <-- TTCATGTGAAGCTCTCTTCCATGGTTGATTTTTGGTCATGGGAGAAAATG
ET0123681      <-- TTCATGTGAAGCTTTCTTCCATGGTTGATTTTTGG-CATGGGAGAAAATG
CT0072607      <-- .............................TTTTGG-CATGGG-GAAAATG
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> TTCATGTGAAGCTCTCTTCCATGGTTGATTTTTGG-CATGGGAGAAAATG

               651    -    701
RU05074        --> TGGATAAGCTTCCTAGGCATGAGTCTTCTATAT-CTTTTTAAGGGGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- TGGATAAGCTTCCTAGGCATGAGTCTTCTATAT-CTTTTTAAGGGGTTTG
ET0061196      <-- TGGATAAGCTTCCTAGGCATGAGTCTTCTATAT-CTTTTTAAGGGGTTTG
ET0123681      <-- TGGATAAGCTTCCTAGGCATGAGTCTTCTATAT-CTTTTTAAGGGGTTTG
CT0072607      <-- TGGATAAGCTTCCTAGGCATGAGTCTTCTATAT-CTTTTTAAGGGGTTTG
ET0053784      <-- .........TTCCTAGGCATGAGTCTTCTATAT-CTTTTTAAGGGGTTTG
CT0078869      <-- ..................................................
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> TGGATAAGCTTCCTAGGCATGAGTCTTCTATATTCTTTTTAAGGGGTTTG

               701    -    751
RU05074        --> GTATTCTATTAAAATAATTATTGTATATACATGCTGGAAGTTGGTGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- GTATTCTATTAAAATAATTATTGTATATACATGCTGGGAGTTGGTGCTTC
ET0061196      <-- GTATTCTATTAAAATAATTATTGTATATACATGCTGGAAGTTGGTGCTTC
ET0123681      <-- GTATTCTATTAAAATAATTATTGTATATACATGCTGGAAGTTGGAGCTTC
CT0072607      <-- GTATTCTATTAAAATAATTATTGTATATACATGCTGGAAGTTGGTGCTTC
ET0053784      <-- GTATTCTATTAAAATAATTATTGTATATACATGCTGGAAGTTGGTGCTTC
CT0078869      <-- GTATTCTATTAAAATAATTATTGTATATACATGCTGGAAGTTGGTGCTTC
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> -TATTCTATTAAAATAATTATTGT..........................

               751    -    801
RU05074        --> CCATTTGCTTTTTTGTACAGAATGTAAAAAACATGGATACTTTGTTCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- CCATTTGCTTTTTTGT..................................
ET0061196      <-- CCATTTGCTTTTTTGTACAGAATGTAAAAAACATGGATACTTTGTTCATA
ET0123681      <-- CCATTTGCTTTTTTGTACAGAATGTAAAAAACATGGATACTTTGTTCATA
CT0072607      <-- CCATTTGCTTTTTTGTACAGAATGTAAAAAACATGGATTCTTTGTTCATA
ET0053784      <-- CCATTTGCTTTTTTGTACAGAATGTAAAAAACATGGATTCTTTGTTCATA
CT0078869      <-- CCATTTGCTTTTTTGTACAGAATGTAAAAAACATGGATTCTTTGTTCATA
CT0037472      <-- ..................................................
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               801    -    851
RU05074        --> CCTAATATTCAGTGATCTGGGATGCATA-TTATTTGTAGAAAAAAATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- ..................................................
ET0061196      <-- GCTAATATTCAGTGATCTGGGATGCATA-TTATgttaaac..........
ET0123681      <-- CTTAATATTCAGTGATCTGGGATGCATA-TTATTTGTAG...........
CT0072607      <-- GTTAATATTCAATGATCTGGGATGCATA-TTATTTGTAGAAAAAAAatag
ET0053784      <-- GTTAATATTCAATGATCTGGGATGCATACTTATTTGTAaaa.........
CT0078869      <-- GTTAATATTCAATGATCTGGGATGCATA-TTATTTGTAGAAAAAAAaa..
CT0037472      <-- .........CAGTGATCTGGGATGCATA-TTATTTGTAGAAAAAAATGGT
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               851    -    901
RU05074        --> CTGCTCCGGAGTGTGGTCTACTGAAATAGTTATCTGTGTTTCCCTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- gtctgactaccgg.....................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- CTGCTCCGGAGTGTGGTCTACTGAAATAGTTATCTGTGTTTCCCTTTTCT
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               901    -    951
RU05074        --> TTATTTTTTTAATTTATTAATTTTAATTTATTTATTTATTTATTAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034659      <-- ..................................................
RH21X20        <-- ..................................................
CT0007083      <-- ..................................................
ET0128362      <-- ..................................................
ET0131901      <-- ..................................................
ET0127528      <-- ..................................................
ET0128980      <-- ..................................................
CT0101036      <-- ..................................................
RH22Y29        <-- ..................................................
ET0061196      <-- ..................................................
ET0123681      <-- ..................................................
CT0072607      <-- ..................................................
ET0053784      <-- ..................................................
CT0078869      <-- ..................................................
CT0037472      <-- TTATTTTTTTAATTTATTAATTTTAATTTATTTATTTATTTATTAAGAAA
CT0097856      --> ..................................................
ET0128330      --> ..................................................
ET0118100      --> ..................................................
CT0010761      --> ..................................................
CT0093676      --> ..................................................

               951    -   1001
RU05074        --> AA
                   ~~
CT0034659      <-- ..
RH21X20        <-- ..
CT0007083      <-- ..
ET0128362      <-- ..
ET0131901      <-- ..
ET0127528      <-- ..
ET0128980      <-- ..
CT0101036      <-- ..
RH22Y29        <-- ..
ET0061196      <-- ..
ET0123681      <-- ..
CT0072607      <-- ..
ET0053784      <-- ..
CT0078869      <-- ..
CT0037472      <-- AA
CT0097856      --> ..
ET0128330      --> ..
ET0118100      --> ..
CT0010761      --> ..
CT0093676      --> ..