1 - 51
RU05152 --> TTTTTTTTTGATCGAAAATTT-C-AAGTTTAA-C-ATTGTAGTCAAAAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ........TGATCGAAAATTTTC-AAGTTTAA-C-ATTGTAGTCAAAAGC
CT0109261 <-- .........................AGTTTAA-C-ATTGTAGTCAAAAGC
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- ..................................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- ..................................................
ET0038007 <-- ..................................................
ET0077223 <-- ..................................................
ET0017486 <-- ..................................................
CT0095177 <-- ..................................................
ET0027454 <-- ..................................................
ET0011815 <-- ..................................................
ET0124662 <-- ..................................................
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> TTTTTTTTTGATCGAAAATTTTC-AAGTTTAA-C-ATTGTAGTCAAAAGC
CT0052681 --> ...TTTTTTGATCGAAAATTT-C-AAGTTTAA-C-ATTGTAGTCAAAAGC
CT0062157 --> ...TTTTTTGATCGAAAATTT-C-AAGTTTAA-C-ATTGTAGTCAAAAGC
CT0077305 --> ...TTTTTTGATCGAAA-TTT-C-AAGTTTAA-C-ATTGTAGTCAAAAGC
CT0060472 --> ....TTTTTGATCGGAAATTT-CGAAGTTTAAACGATTGTAGTCAAAAGC
ET0003964 --> .......TTGATCGAAAATTTTC-AAGTTTAA-C-ATTGTAGTCAAAAGC
ET0007521 --> .....aaaaGATCGAAAATTTTC-AAGTTTAA-C-ATTGTAGTCAAAAGC
ET0065966 --> ..............................AA-C-ATTGTAGTCAAAAGC
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> ..................................................
CT0039816 --> ..................................................
CT0087951 --> ..................................................
ET0030047 --> ..................................................
CT0050836 --> ..................................................
ET0088848 --> ..................................................
51 - 101
RU05152 --> TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
CT0109261 <-- TCAAAATGGTTATGGTCATAGAAGGACAACAACGAATCAAGTCCTAGGTA
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- ..................................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- ..................................................
ET0038007 <-- ..................................................
ET0077223 <-- ..................................................
ET0017486 <-- ..................................................
CT0095177 <-- ..................................................
ET0027454 <-- ..................................................
ET0011815 <-- ..................................................
ET0124662 <-- ..................................................
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
CT0052681 --> TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
CT0062157 --> TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
CT0077305 --> TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
CT0060472 --> TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
ET0003964 --> TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
ET0007521 --> TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
ET0065966 --> TCAAAATGGTTATGGTCATTGAAGGACAACAACGAATCAAGTCCTAGGTA
ET0075028 --> ...............tttttttttggCAACAACGAATCAAGTCCTAGGTA
ET0076262 --> ........................ggCAACAACGAATCAAGTCCTAGGTA
ET0080098 --> ........................ggCAACAACGAATCAAGTCCTAGGTA
ET0102247 --> ........................ggCAACAACGAATCAAGTCCTAGGTA
ET0106358 --> ...............tttttttttggCAACAACGAATCAAGTCCTAGGTA
ET0107044 --> ...............tttttttttggCAACAACGAATCAAGTCCTAGGTA
ET0107700 --> ........................ggCAACAACGAATCAAGTCCTAGGTA
ET0108190 --> ...............tttttttttggCAACAACGAATCAAGTCCTAGGTA
ET0079503 --> ......................ggcaaacaAACGAATCAAGTCCTAGGTA
CT0095047 --> .....................................CAAGTCCTAGGTA
CT0039816 --> ..................................................
CT0087951 --> ..................................................
ET0030047 --> ..................................................
CT0050836 --> ..................................................
ET0088848 --> ..................................................
101 - 151
RU05152 --> TACATTAAGAATACCAAAATCTTACATAAGACAGAAATTTCAAATTCGAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
CT0109261 <-- TACATTAAGAATACCAAAATCTTACATAAGACAGAAATTTCAAATTCGAG
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- ..................................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- ..................................................
ET0038007 <-- ..................................................
ET0077223 <-- ..................................................
ET0017486 <-- ..................................................
CT0095177 <-- ..................................................
ET0027454 <-- ..................................................
ET0011815 <-- ..................................................
ET0124662 <-- ..................................................
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
CT0052681 --> TACATTAAGAATACCAAAATCTTACATAAGACAGAAATTTAAAATTCGAG
CT0062157 --> TACATTAAGAATACCAAAATCTTACATAAGACAGAAATTTAAAATTCGAG
CT0077305 --> TACATTAAGAATACCAAAATCTTACATAAGACAGAAATTTAAAATTCGAG
CT0060472 --> TACATTAAGAATACCAAAATCTTACATAAGACAGAAATTTAAAATTCGAG
ET0003964 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0007521 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0065966 --> TACATTAAGAATACCAAAATCTTACATAAGACAGAAATTTAAAATTCGAG
ET0075028 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0076262 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0080098 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0102247 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0106358 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0107044 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0107700 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0108190 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
ET0079503 --> TACATTAAGAATACCAAAATCTTACATAAGACGGAAATTTCAAATTCGAG
CT0095047 --> TACATTAAGAATACCAAAATCTTACATAAGACAGAAATTTCAAATTCGAG
CT0039816 --> ..................................................
CT0087951 --> ..................................................
ET0030047 --> ..................................................
CT0050836 --> ..................................................
ET0088848 --> ..................................................
151 - 201
RU05152 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- CAAACAGCTTAATTATAAAAGTCCATGC......................
CT0109261 <-- CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCtagag
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- ..................................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- ..................................................
ET0038007 <-- ..................................................
ET0077223 <-- ..................................................
ET0017486 <-- ..................................................
CT0095177 <-- ..................................................
ET0027454 <-- ..................................................
ET0011815 <-- ..................................................
ET0124662 <-- ..................................................
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> CAAACAGCTTAATTATAAAAGTCCATGCA.....................
CT0052681 --> CAAACAGCTTAATTATAAAAGTCCATGCATCTGGCCAAGAGAACCCAAGC
CT0062157 --> CAAACAGCTTAATTATAAAAGTCCATGCATCTGGCCAAGAGAACCCAAGC
CT0077305 --> CAAACAGCTTAATTATAAAAGTCCATGCATCTGGCCAAGAGAACCCAAGC
CT0060472 --> CAAACAGCTTAATTATAAAAGTCCATGCATCTGGCCAAGAGAACCCAAGC
ET0003964 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGttct.............
ET0007521 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
ET0065966 --> CAAACAGCTTAATTATAAAAGTCCATGCATCTGGCCAAGAGAACCCAAGC
ET0075028 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
ET0076262 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
ET0080098 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
ET0102247 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
ET0106358 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
ET0107044 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
ET0107700 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
ET0108190 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
ET0079503 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
CT0095047 --> CAAACAGCTTAATTATAAAAGTCCATGCATCCGGCCAAGAGAACCCAAGC
CT0039816 --> ..................................................
CT0087951 --> ..................................................
ET0030047 --> ..................................................
CT0050836 --> ..................................................
ET0088848 --> ..................................................
201 - 251
RU05152 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAAGCAACAAGAGTGCTGGCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- aattt.............................................
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- ..................................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- ..................................................
ET0038007 <-- ..................................................
ET0077223 <-- ..................................................
ET0017486 <-- ..................................................
CT0095177 <-- ..................................................
ET0027454 <-- ..................................................
ET0011815 <-- ..................................................
ET0124662 <-- ..................................................
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> ..................................................
CT0052681 --> TAGCTA-TCCAGAGCTTCATTCCCCAACCTACGCAACAAGAGTGCTGGCA
CT0062157 --> TAGCTA-TCCAGAGCTTCATTCCCCAACCTACGCAACAAGAGTGCTGGCA
CT0077305 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTACGCAACAAGAGTGCTGGCA
CT0060472 --> TAGCTA-TCCAGAGCTTCATTCCCCAACCTACGCAACAAGAGTGCTGGCA
ET0003964 --> ..................................................
ET0007521 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAAGCAACAAGAGTGCTGGCA
ET0065966 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTACGCAACAAGAGTGCTGGCA
ET0075028 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAA..................
ET0076262 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAA..................
ET0080098 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAA..................
ET0102247 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAAACAA..............
ET0106358 --> TAGCTAATCCAGAGCTTCATTCCC-AACCTAAACAA..............
ET0107044 --> TAGCTA-TCCAGAGCTTCATTCCC..........................
ET0107700 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAA..................
ET0108190 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAA..................
ET0079503 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAA..................
CT0095047 --> TAGCTA-TCCAGAGCTTCATTCCC-AACCTAAGCAACAAGAGTGCTGGCA
CT0039816 --> ..................................................
CT0087951 --> ..................................................
ET0030047 --> ..................................................
CT0050836 --> ..................................................
ET0088848 --> ..................................................
251 - 301
RU05152 --> GTGGTGGACTCGTATTTCCATACTGGGGGGAGCTTCTTTGTCTTCTTGTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- ..................................................
CT0026185 <-- ........................................TCTTCTTGTA
ET0034309 <-- ...............................................GTA
ET0040573 <-- ...............................................GTA
ET0054960 <-- ...............................................GTA
CT0066134 <-- ..................................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- ..................................................
ET0038007 <-- ..................................................
ET0077223 <-- ..................................................
ET0017486 <-- ..................................................
CT0095177 <-- ..................................................
ET0027454 <-- ..................................................
ET0011815 <-- ..................................................
ET0124662 <-- ..................................................
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> ..................................................
CT0052681 --> GTGGTGGACTCGT.....................................
CT0062157 --> GTGGTG............................................
CT0077305 --> GTGGTG............................................
CT0060472 --> GTGGTG............................................
ET0003964 --> ..................................................
ET0007521 --> GTGGTG............................................
ET0065966 --> GTGGTGGACTCGTATTTCCAGACTGGGGGGAGCTT...............
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> GTGGTGGACTCGTATTTCCAGACTGGGGGGAGCTTCTTTGTCTTCTTGTA
CT0039816 --> .......................................GTCTTCTTGTA
CT0087951 --> ..................................................
ET0030047 --> ..................................................
CT0050836 --> ..................................................
ET0088848 --> ..................................................
301 - 351
RU05152 --> GTAACGAGCAAGCCTGTGAATCCTGCTCTCCACAAGAATCAAACGGAA-C
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- ..................................................
CT0026185 <-- GTAACGAGCAAGCCTGTGAATCCTGCTCTCCACAAGAATCAAACGGAA-C
ET0034309 <-- GTAACGAGCAAGCCTGTGAATCCTGCTCTCCACAAGAATCAAACGGAA-C
ET0040573 <-- GTAACGAGCAAGCCTGTGAATCCTGCTCTCCACAAGAATCAAACGGAA-C
ET0054960 <-- GTAACGAGCAAGCCTGTGAATCCTGCTCTCCACAAGAATCAAACGGAAAC
CT0066134 <-- .........................CTCTCCACAAGAATCAAACGGAA-C
CT0082964 <-- .................................AAGAATCAAACGGAA-C
CT0002218 <-- ..................................................
ET0100505 <-- ..................................................
ET0038007 <-- ..................................................
ET0077223 <-- ..................................................
ET0017486 <-- ..................................................
CT0095177 <-- ..................................................
ET0027454 <-- ..................................................
ET0011815 <-- ..................................................
ET0124662 <-- ..................................................
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> ..................................................
CT0052681 --> ..................................................
CT0062157 --> ..................................................
CT0077305 --> ..................................................
CT0060472 --> ..................................................
ET0003964 --> ..................................................
ET0007521 --> ..................................................
ET0065966 --> ..................................................
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> GTAACGAGCAAGCCTGTGAATCCTGCTCTCCA..................
CT0039816 --> GTAACGAGCAAGCCTGTGAATCCTGCTCTCCACAAGAATCAAACGGAA-C
CT0087951 --> ............CCTGTGAATCCTGCTCTCCACAAGAATCAAACGGAA-C
ET0030047 --> ..................................................
CT0050836 --> ..................................................
ET0088848 --> ..................................................
351 - 401
RU05152 --> TTGGAATCCTTGTCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGACAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- .................................................. Control
CT0109261 <-- .................................................. Control
CT0026185 <-- TTGGAATCCTTGTCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGACAC Control
ET0034309 <-- TTGGAATCCTTGTCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGAAAC Ethylene
ET0040573 <-- TTGGAATCCTTGTCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGAAAC Ethylene
ET0054960 <-- TTGGAATCCTTGTCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGAAAC Ethylene
CT0066134 <-- TTGGAATCCTTGTCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGACAC Control
CT0082964 <-- TTGGAATCCTTGTCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGACAC Control
CT0002218 <-- ............TCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGACAC Control
ET0100505 <-- .................................................. Ethylene
ET0038007 <-- .................................................. Ethylene
ET0077223 <-- .................................................. Ethylene
ET0017486 <-- .................................................. Ethylene
CT0095177 <-- .................................................. Control
ET0027454 <-- .................................................. Ethylene
ET0011815 <-- .................................................. Ethylene
ET0124662 <-- .................................................. Ethylene
ET0056364 <-- .................................................. Ethylene
ET0009170 <-- .................................................. Ethylene
CT0028071 --> .................................................. Control
CT0052681 --> .................................................. Control
CT0062157 --> .................................................. Control
CT0077305 --> .................................................. Control
CT0060472 --> .................................................. Control
ET0003964 --> .................................................. Ethylene
ET0007521 --> .................................................. Ethylene
ET0065966 --> .................................................. Ethylene
ET0075028 --> .................................................. Ethylene
ET0076262 --> .................................................. Ethylene
ET0080098 --> .................................................. Ethylene
ET0102247 --> .................................................. Ethylene
ET0106358 --> .................................................. Ethylene
ET0107044 --> .................................................. Ethylene
ET0107700 --> .................................................. Ethylene
ET0108190 --> .................................................. Ethylene
ET0079503 --> .................................................. Ethylene
CT0095047 --> .................................................. Control
CT0039816 --> TTGGAATCCTTGTCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGACAC Control
CT0087951 --> TTGGAATCCTTGTCCTTCCTGTTCCTCTCCAAATGCTTCCTGACTGACAC Control
ET0030047 --> .................................................. Ethylene
CT0050836 --> .................................................. Control
ET0088848 --> .................................................. Ethylene
401 - 451
RU05152 --> AGCCTTCTT-GATAAGGTGGTACAGATCCTCAGGAATTTCAGGAGCAAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- ..................................................
CT0026185 <-- AGCCTTCTT-GATAAGGTGGTACAGATCCTCAGGAATTTCAGGAGCAAGA
ET0034309 <-- AGCCTTCTT-GATAAGGTGGTACAGATCCTCAGGAATTTCAGGAGCAAGA
ET0040573 <-- AGCCTTCTT-GATAAGGTGGTACAGATCCTCAGGAATTTCAGGAGCAAGA
ET0054960 <-- AGCCTTCTT-GATAAGGTGGTACAGATCCTCAGGAATTTCAGGAGCAAGA
CT0066134 <-- AGCCTTCTTTGATAAGGTGGTACAGATCCTCAGGAATTTCAGGAGCAAGA
CT0082964 <-- AGCCTTCTT-GATAAGGTGGTACAGATCCTCAGGAATTTCAGGAGCAAGA
CT0002218 <-- AGCCTTCTT-GATAAGGTGGTACAGATCCTCAGGAATTTCAGGAGCAAGA
ET0100505 <-- ...........................................AGCAAGA
ET0038007 <-- ..................................................
ET0077223 <-- ..................................................
ET0017486 <-- ..................................................
CT0095177 <-- ..................................................
ET0027454 <-- ..................................................
ET0011815 <-- ..................................................
ET0124662 <-- ..................................................
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> ..................................................
CT0052681 --> ..................................................
CT0062157 --> ..................................................
CT0077305 --> ..................................................
CT0060472 --> ..................................................
ET0003964 --> ..................................................
ET0007521 --> ..................................................
ET0065966 --> ..................................................
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> ..................................................
CT0039816 --> AGCCTTCTT-GATAAGGTGGTACAGATCCTCAG.................
CT0087951 --> AGCCTTCTT-GATAAGGTGGTACAGATCCTCAGGAATTTCAGGAGCAAGA
ET0030047 --> ......................CAGATCCTCAGGAATTTCAGGAGCAAGA
CT0050836 --> .........................ggtttttttAATTTCAGGAGCAAGA
ET0088848 --> ..................................................
451 - 501
RU05152 --> CCATGAGCTTTAAGAATTCGCAAGATCTTGCTTCCAGTAACGCTCTTAAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- ..................................................
CT0026185 <-- CCATGAGCTTTAAGAATCCGCAAGATCTTGCTTCCAGTAACGCT......
ET0034309 <-- CCATGAGCTTTAAGAATTCGCAAGATCTTGC...................
ET0040573 <-- CCATGAGCTTTAAGAATTCGCAAGATCTTGC...................
ET0054960 <-- CCATGAGCTTTAAGAATTCGCAAGATCTTGC...................
CT0066134 <-- CCATGAGCTTTAAGAATCCGCAAGATCTTGCTTCCAGTAACGCTCTTAAC
CT0082964 <-- CCATGAGCTTTAAGAATCCGCAAGATCTTGCTTCCAGTAACGCTCTTAAC
CT0002218 <-- CCATGAGCTTTAAGAATCCGCAAGATCTTGCTTCCAGTAACGCTCTTAAC
ET0100505 <-- CCATGAGCTTTAAGAATTCGCAAGATCTTGCTTCCAGTAACGCTCTTAAC
ET0038007 <-- .................................agaacggatgTCTAAAC
ET0077223 <-- ..............................................TAAC
ET0017486 <-- ..................................................
CT0095177 <-- ..................................................
ET0027454 <-- ..................................................
ET0011815 <-- ..................................................
ET0124662 <-- ..................................................
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> ..................................................
CT0052681 --> ..................................................
CT0062157 --> ..................................................
CT0077305 --> ..................................................
CT0060472 --> ..................................................
ET0003964 --> ..................................................
ET0007521 --> ..................................................
ET0065966 --> ..................................................
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> ..................................................
CT0039816 --> ..................................................
CT0087951 --> CCATGAGCTTTAAGAATCCGCAAGATCTTGCTTCCAGTAACGCTCTTAAC
ET0030047 --> CCATGAGCTTTAAGAATCCGCAAGATCTTGCTTCCAGTAACGCTCTTAAC
CT0050836 --> CCATGAGCTTTAAGAATCCGCAAGATCTTGCTTCCAGTAACGCTCTTAAC
ET0088848 --> ..................................................
501 - 551
RU05152 --> CTGAGCAATTCCATGAGAGTCACGAAGAA-TCACACCGATCTGAGACGGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- ..................................................
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- CTGAGCAATTCCATGAGAGTCACGAAGAA-TCACACCGATCTGAGACGGC
CT0082964 <-- CTGAGCAATTCCATGAGAGTCACGAAGAA-TCACACCGAT..........
CT0002218 <-- CTGAGCAA..........................................
ET0100505 <-- CTGAGCAATCCCATGAGAGTCACGAAGAA-TCACACCGATCTGAGACGGC
ET0038007 <-- CTGAGCAATTCCATGAGAGTCACGAAGAA-TCACACCGATCTGAGACGGC
ET0077223 <-- CTGAGCAATTCCATGAGAGTCACGAAGAA-TCACACCGATCTGAGACGGC
ET0017486 <-- .....CAATTCCATGAGAGTCACGAAGAA-TCACACCGATCTGAGACGGC
CT0095177 <-- ..........ctATGAGAGTCACGAAGAAATCACACCGATCTGAGACGGC
ET0027454 <-- .................AGTCACGAAGAA-TCACACCGATCTGAGACGGC
ET0011815 <-- .....................ACGAAGAA-TCACACCGATCTGAGACGGC
ET0124662 <-- .............................................ACGGC
ET0056364 <-- ..................................................
ET0009170 <-- ..................................................
CT0028071 --> ..................................................
CT0052681 --> ..................................................
CT0062157 --> ..................................................
CT0077305 --> ..................................................
CT0060472 --> ..................................................
ET0003964 --> ..................................................
ET0007521 --> ..................................................
ET0065966 --> ..................................................
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> ..................................................
CT0039816 --> ..................................................
CT0087951 --> CTGAGCAATTCCATGAGAGTCACGAAGAA-TCACACCGAT..........
ET0030047 --> CTGAGCAATTCCATGAGAGTCACGAAGAA-TCACACCGATCTGAGACGGC
CT0050836 --> CTGAGCAATTCCATGAGAGTCACGAAGAA-TCACACCGATCTGAGACGGC
ET0088848 --> ................................................GC
551 - 601
RU05152 --> GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- ..................................................
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- GTCATACCCT........................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
ET0038007 <-- GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
ET0077223 <-- GTCATACCCTTCTTCGCAAACTTGGAAATG-CTATCCTCCACA-TCGGGG
ET0017486 <-- GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
CT0095177 <-- GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
ET0027454 <-- GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
ET0011815 <-- GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
ET0124662 <-- GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
ET0056364 <-- .........TTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
ET0009170 <-- ..................................................
CT0028071 --> ..................................................
CT0052681 --> ..................................................
CT0062157 --> ..................................................
CT0077305 --> ..................................................
CT0060472 --> ..................................................
ET0003964 --> ..................................................
ET0007521 --> ..................................................
ET0065966 --> ..................................................
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> ..................................................
CT0039816 --> ..................................................
CT0087951 --> ..................................................
ET0030047 --> GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
CT0050836 --> GTCATACCCTTCTTCGCAAACTTGCAAATGTCTATCCTCCACAGTCGGGG
ET0088848 --> GTCATACCCTTCTTCGCAAACTTGCAAATG-CTATCCTCCACA-TCGGGG
601 - 651
RU05152 --> GTAGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- ..................................................
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- ..................................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- GTAGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
ET0038007 <-- GTAGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
ET0077223 <-- GTAGAGATCTTCAACCAGCTCGGTGGGGGTTCTCTTGTAGGGCAGAGCCG
ET0017486 <-- GTGGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
CT0095177 <-- GTAGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
ET0027454 <-- GTAGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
ET0011815 <-- GTAGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
ET0124662 <-- GTAGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
ET0056364 <-- GTAGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
ET0009170 <-- ..............cctGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
CT0028071 --> ..................................................
CT0052681 --> ..................................................
CT0062157 --> ..................................................
CT0077305 --> ..................................................
CT0060472 --> ..................................................
ET0003964 --> ..................................................
ET0007521 --> ..................................................
ET0065966 --> ..................................................
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> ..................................................
CT0039816 --> ..................................................
CT0087951 --> ..................................................
ET0030047 --> GTA-AGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
CT0050836 --> GGTGAGATCTTCAACCAGCTCGG...........................
ET0088848 --> GTGGAGATCTTCAACCAGCTCGGTGGGG-TTCTCTTGTAGGGCAGAGCCG
651 - 701
RU05152 --> AAGCTGACATACCCTTACCATGGCTGTGCATGCGCCCCATGATTGCAGCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- ..................................................
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- ..................................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- AAGCTGACATACCCTTACCATGGCTtgttgt...................
ET0038007 <-- AAGCTGACATACCCTTACCATGGCTGTGCAT...................
ET0077223 <-- AAGCTGACATACCCTTACCATGGCTGTGCATGCGCCCCATGATTGCAGCG
ET0017486 <-- AAGCTGACATACCCTTACCATGGCTGTGCATACGCCCCATGATTGCAGCG
CT0095177 <-- AAGCTGACATACCCTTACCATGGCTGTGCATGCGCCCCATGATTGCAGCG
ET0027454 <-- AAGCTGACATACCCTTACCATGGCTGTGCATGCGCCCCATGATTGCAGCG
ET0011815 <-- AAGCTGACATACCCTTACCATGGCTGTGCATGCGCCCCATGATTGCAGCG
ET0124662 <-- AAGCTGACATACCCTTACCATGGCTGTGCATACGCCCCATGATTGCAGCG
ET0056364 <-- AAGCTGACATACCCTTACCATGGCTGTGCATACGCCCCATGATTGCAGCG
ET0009170 <-- AAGCTGACATACCCTTACCATGGCTGTGCATACGCCCCATGATTGCAGCG
CT0028071 --> ..................................................
CT0052681 --> ..................................................
CT0062157 --> ..................................................
CT0077305 --> ..................................................
CT0060472 --> ..................................................
ET0003964 --> ..................................................
ET0007521 --> ..................................................
ET0065966 --> ..................................................
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> ..................................................
CT0039816 --> ..................................................
CT0087951 --> ..................................................
ET0030047 --> AAGC..............................................
CT0050836 --> ..................................................
ET0088848 --> AAGCTGACATACCCTTACCATGGCTGTGCATACGCCCCATGATTGCAGCG
701 - 751
RU05152 --> AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGGTTTCACTGAGAGAGCGGCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ..................................................
CT0109261 <-- ..................................................
CT0026185 <-- ..................................................
ET0034309 <-- ..................................................
ET0040573 <-- ..................................................
ET0054960 <-- ..................................................
CT0066134 <-- ..................................................
CT0082964 <-- ..................................................
CT0002218 <-- ..................................................
ET0100505 <-- ..................................................
ET0038007 <-- ..................................................
ET0077223 <-- AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGG...................
ET0017486 <-- AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGGTTTCAC.............
CT0095177 <-- AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGGTTTCACTGAGAG.......
ET0027454 <-- AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGGTTTCACTGAGAGAGC....
ET0011815 <-- AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGGTTTCACTGAGAGAGCGGCA
ET0124662 <-- AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGGTTTCACTGAGAGAGCGGCA
ET0056364 <-- AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGGTTTCACTGAGAGAGCGGCA
ET0009170 <-- AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGGTTTCACTGAGAGAGCG...
CT0028071 --> ..................................................
CT0052681 --> ..................................................
CT0062157 --> ..................................................
CT0077305 --> ..................................................
CT0060472 --> ..................................................
ET0003964 --> ..................................................
ET0007521 --> ..................................................
ET0065966 --> ..................................................
ET0075028 --> ..................................................
ET0076262 --> ..................................................
ET0080098 --> ..................................................
ET0102247 --> ..................................................
ET0106358 --> ..................................................
ET0107044 --> ..................................................
ET0107700 --> ..................................................
ET0108190 --> ..................................................
ET0079503 --> ..................................................
CT0095047 --> ..................................................
CT0039816 --> ..................................................
CT0087951 --> ..................................................
ET0030047 --> ..................................................
CT0050836 --> ..................................................
ET0088848 --> AAGCTCTCTGCGTTTTGGTCTCTGGTTAGGGTTTCACTGAG.........
751 - 801
RU05152 --> GAGGGTCAAGGTGTTCTGCGATGAGGTTTTCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0034289 <-- ................................
CT0109261 <-- ................................
CT0026185 <-- ................................
ET0034309 <-- ................................
ET0040573 <-- ................................
ET0054960 <-- ................................
CT0066134 <-- ................................
CT0082964 <-- ................................
CT0002218 <-- ................................
ET0100505 <-- ................................
ET0038007 <-- ................................
ET0077223 <-- ................................
ET0017486 <-- ................................
CT0095177 <-- ................................
ET0027454 <-- ................................
ET0011815 <-- GAG.............................
ET0124662 <-- GAGGGTCAAGGTGTTCGGAGATGAGGTTTTCG
ET0056364 <-- GAG.............................
ET0009170 <-- ................................
CT0028071 --> ................................
CT0052681 --> ................................
CT0062157 --> ................................
CT0077305 --> ................................
CT0060472 --> ................................
ET0003964 --> ................................
ET0007521 --> ................................
ET0065966 --> ................................
ET0075028 --> ................................
ET0076262 --> ................................
ET0080098 --> ................................
ET0102247 --> ................................
ET0106358 --> ................................
ET0107044 --> ................................
ET0107700 --> ................................
ET0108190 --> ................................
ET0079503 --> ................................
CT0095047 --> ................................
CT0039816 --> ................................
CT0087951 --> ................................
ET0030047 --> ................................
CT0050836 --> ................................
ET0088848 --> ................................
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