SNPs of unigene RU05177
               1      -     51
RU05177        --> GCAAAACTATTCAAAGAATCATTGAATTTGAACTTTTGAAGGAAAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> GCAAAACTATTCAAAGAATCATTGAATTTGAACTTTTGAAGGAAAAGAAA
RH35AK80       --> GCAAAACTATTCAAAGAATCATTGAATTTGAACTTTTGAAGGAAAAGAAA
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               51     -    101
RU05177        --> AGGAGAGACAACCCATCAGTGCCATTGTTTTGCATTGCTCATTGTTCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> AGGAGAGACAACCCATCAGTGCCATTGTTTTGCATTGCTCATTGTTCTAT
RH35AK80       --> AGGAGAGACAACCCATCAGTGCCATTGTTTTGCATTGCTCATTGTTCTAT
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               101    -    151
RU05177        --> TCGGAAACTAGGATCCTGATATATATAGCCATTGTTTATATATATAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> TCGGAAACTAGGATCCTGATATATATAGCCATTGTTTATATATATAACAC
RH35AK80       --> TCGGAAACTAGGATCCTGATATATATAGCCATTGTTTATATATATAACAC
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               151    -    201
RU05177        --> CTTTGGTTGTGTGGTTTTTGTATATAGACCGAGGTGAAACGGGGTTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> CTTTGGTTGTGTGGTTTTTGTATATAGACCGAGGTGAAACGGGGTTTTGG
RH35AK80       --> CTTTGGTTGTGTGGTTTTTGTATATAGACCGAGGTGAAACGGGGTTTTGG
ET0012462      --> .........................................GGGTTTTGG
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               201    -    251
RU05177        --> TGATTTGGGTTGTAAAGGTTTTGATTGATTTGTGAGATTTGAGATGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> TGATTTGGGTTGTAAAGGTTTTGATTGATTTGTGAGATTTGAGATGGCTG
RH35AK80       --> TGATTTGGGTTGTAAAGGTTTTGATTGATTTGTGAGATTTGAGATGGCTG
ET0012462      --> TGATTTGGGTTGTAAAGGTTTTGATTGATTTGTGAGATTTGAGATGGCTG
ET0063577      --> ...................................GATTTGAGATGGCTG
ET0074911      --> ...................................GATTTGAGATGGCTG
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               251    -    301
RU05177        --> CTGCTGCTGCTGGTGTCATTGGAGGAAATGGG-TCTTCCTGGATTAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> CTGCTGCTGCTGGTGTCATTGGAGGAAATGGG-TCTTCCTGGATTAACCA
RH35AK80       --> CTGCTGCTGCTGGTGTCATTGGAGGAAATGGG-TCTTCCTGGATTAACCA
ET0012462      --> CTGCTGCTGCTGGTGTCATTGGAGGAAATGGGGTCTTCCTGGATTAACCA
ET0063577      --> CTGCTGCTGCTGGTGTCATTGGAGGAAATGGG-TCTTCCTGGATTAACCA
ET0074911      --> CTGCTGCTGCTGGTGTCATTGGAGGAAATGGG-TCTTCCTGGATTAACCA
CT0061884      --> .............TGTCATTGGAGGAAATGGG-TCTTCCTGGATTAACCA
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               301    -    351
RU05177        --> GTTTAAGGATAAGTCATCGAGGAAGAAGAAGACGGTGAACAGGGCTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................  Control
CT0079929      <-- ..................................................  Control
ET0115068      <-- ..................................................  Ethylene
CT0020090      <-- ..................................................  Control
CT0043315      <-- ..................................................  Control
CT0013078      <-- ..................................................  Control
RH34AJ42       --> GTTTAAGGATAAGTCATCGAGGAAGAAGAAGACGGTGAACAGGGCTATGG  WaterDS
RH35AK80       --> GTTTAAGGATAAGTCATCGAGGAAGAAGAAGACGGTGAACAGGGCTATGG  WaterDS
ET0012462      --> GTTTAAGGATAAGTCATCGAGGAAGAAGAAGACGGTGAACg.........  Ethylene
ET0063577      --> GTTTAAGGATAAGTCATCGAGGAAGAAGAAGACGGTGAACAAGGCTATGG  Ethylene
ET0074911      --> GTTTAAGGATAAGTCATCGAGGAAGAAGAAGACGGTGAACAAGGCTATGG  Ethylene
CT0061884      --> GGTTAAGGATAAGTCATCGAGGAAGAAGAAGACGGTGAACAGGGCTATGG  Control
ET0100883      --> ..................................................  Ethylene
ET0128299      --> ..................................................  Ethylene
ET0025464      --> ..................................................  Ethylene
ET0063614      --> ..................................................  Ethylene
ET0093136      --> ..................................................  Ethylene
CT0024700      --> ..................................................  Control
ET0000849      --> ..................................................  Ethylene

               351    -    401
RU05177        --> TTTCCTGTGTTTCTTCTTCTGTGATGGATCCGTATCAGACTTTGAGGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ........................TGGATCCGTATCAGACTTTGAGGATC
CT0079929      <-- ..............................CGTATCAGACTTTGAGGATC
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> TTTCCTGTGTTTCTTCTTCTGTGATGGATCCGTATCAGACTTTGAGGATC
RH35AK80       --> TTTCCTGTGTTTCTTCTTCTGTGATGGATCCGTATCAGACTTTGAGGATC
ET0012462      --> ..................................................
ET0063577      --> TTTCCTGTGTTTCTTCTTCTGTGATGGATCCGTATCAGACTTTGAGGATC
ET0074911      --> TTTCCTGTGTTTCTTCTTCTGTGATGGATCCGTATCAGACTTTGAGGATC
CT0061884      --> TTTCCTGTGTTTCTTCTTCTGTGATGGATCCGTATCAGACTTTGAGGATC
ET0100883      --> ...................................CAGACTTTGAGGATC
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               401    -    451
RU05177        --> CGACCCGGTGCCTCTGAAT-CTGAGGTCAGGAAGG-C-TTTTAG-ACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- CGACCCGGTGCCTCTGAAT-CTGAGGTCAGGAAGG-C-TTTTAG-ACAGC
CT0079929      <-- CGACCCGGTGCCTCTGAAT-CTGAGGTCAGGAAGG-C-TTTTAG-ACAGC
ET0115068      <-- .cccggtcgGCCTCTGAATACTGAGGTCAGGAAGG-CGTTTTAGTACAGC
CT0020090      <-- .......................AGGTCAGGAAGG-C-TTTTAG-ACAGC
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> CGACCCGGTGCCTCTGAAT-CTGAGGTCAGGAAGG-C-TTTTAG-ACAGC
RH35AK80       --> CGACCCGGTGCCTCTGAAT-CTGAGGTCAGGAAGG-C-TTTTAG-ACAGC
ET0012462      --> ..................................................
ET0063577      --> CGACCCGGTGCCTCTGAAT-CTGAGGTCAGGAAGG-C-TTTTAG-ACAGC
ET0074911      --> CGACCCGGTGCCTCTGAAT-CTGAGGTCAGGAAGGTC-TTTTAG-ACAGC
CT0061884      --> CGACCCGGT.........................................
ET0100883      --> CGACCCGGTGCCTCTGAAT-CTGAGGTCAGGAAGG-C-TTTTAG-ACAGC
ET0128299      --> ....................CTGAGGTCAGGAAGG-C-TTTTAG-ACAGC
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               451    -    501
RU05177        --> TTGCCTTGCAGTATCATCCAGACGTATGTAGAGGAAACAATTGTGGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- TTGCCTTGCAGTATCATCCAGACGTATGTAGAGGAAACAATTGTGGAGTT
CT0079929      <-- TTGCCTTGCAGTATCATCCAGACGTATGTAGAGGAAACAATTGTGGAGTT
ET0115068      <-- TTGCCTTGCAGTATCATCCAGACGTATGTAGAGGAAACAATTGTGGAGTT
CT0020090      <-- TTGCCTTGCAGTATCATCCAGACGTATGTAGAGGAAACAATTGTGGAGTT
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> TTGCCTTGCAGTATCATCCAGACGTATGTAGAGGAAACAATTGTGGAGTT
RH35AK80       --> TTGCCTTGCAGTATCATCCAGACGTATGTAGAGGAAACAATTGTGGAGTT
ET0012462      --> ..................................................
ET0063577      --> TTGCCTTGCAGTATCATCCAGtacg.........................
ET0074911      --> TTGCCTTGCAGTATCATCCAG.............................
CT0061884      --> ..................................................
ET0100883      --> TTGCCTTGCAGTATCATCCAGACGTATGTAGAGGAAACAATTGTGGAGTT
ET0128299      --> TTGCCTTGCAGTATCATCCAGACGTATGTAGAGGAAACAATTGTGGAGTT
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               501    -    551
RU05177        --> CAGTTTCACGAAATCAATGAAGCTTATGATATTGTCATGACCAATTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- CAGTTTCACGAAA.....................................
CT0079929      <-- CAGTTTCACGAAATCAATGAAGCTTATGATATTGTCATGACCAATTTGAG
ET0115068      <-- CAGTTTCACGAAATCAATGAAGCTTATGATATTGTCATGACCAATTTGAG
CT0020090      <-- CAGTTTCACGAAATCAATGAAGCTTATGATATTGTCATGACCAATTTG..
CT0043315      <-- ..................................................
CT0013078      <-- ..................................................
RH34AJ42       --> CAGTTTCACGAAATCAATGAAGCTTATGATATTGTCATGACCAATTTGAG
RH35AK80       --> CAGTTTCACGAAATCAATGAAGCTTATGATATTGTCATGACCAATTTGAG
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> CAGTTTCACGAAATCAATGAAGCTTATGATATTGTCATGACCAATTTGAG
ET0128299      --> CAGTTTCACGAAATCAATGAAGCTTATGATATTGTCATGACCAATTTGAG
ET0025464      --> .........................ATGATATTGTCATGACCAATTTGAG
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> ..................................................
ET0000849      --> ..................................................

               551    -    601
RU05177        --> AGAAGAAATGACTCCATTACAGATGTATGAGACATATGATGAAGGAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................  Control
CT0079929      <-- AGAAGAAACGACTCCATTACAGATGTATGA....................  Control
ET0115068      <-- AGAAGAAACGACTCCATTACAGATGTATGAGACATATGATGAgcagg...  Ethylene
CT0020090      <-- ..................................................  Control
CT0043315      <-- .............................................AGAGG  Control
CT0013078      <-- ..................................................  Control
RH34AJ42       --> AGAAGAAATGACTCCATTACAGATGTATGAGACATATGATGAAGGAGAGG  WaterDS
RH35AK80       --> AGAAGAAATGACTCCATTACAGATGTATGAGACATATGATGAAGGAGAGG  WaterDS
ET0012462      --> ..................................................  Ethylene
ET0063577      --> ..................................................  Ethylene
ET0074911      --> ..................................................  Ethylene
CT0061884      --> ..................................................  Control
ET0100883      --> AGAAGAAACGACTCCATTACAGATGTATGAGACATATGATGAAGGAGAGG  Ethylene
ET0128299      --> AGAAGAAACGACTCCATTACAGATGTATGAGACATATGATGAAGGAGAGG  Ethylene
ET0025464      --> AGAAGAAACGACTCCATTACAGATGTATGAGACATATGATGAAGGAGAGG  Ethylene
ET0063614      --> .....AAACGACTCCATTACAGATGTATGAGACATATGATGAAGGAGAGG  Ethylene
ET0093136      --> .....AAACGACTCCATTACAGATGTATGAGACATATGATGAAGGAGAGG  Ethylene
CT0024700      --> ..................................................  Control
ET0000849      --> ..................................................  Ethylene

               601    -    651
RU05177        --> ATGATTCGATGAGAGGAATGAACGATCCAGATTATGATATGTGGGAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ATGATTCGATGAGAGGAATGAACGATCCAGATTATGATATGTGGGAGGAA
CT0013078      <-- ..................................................
RH34AJ42       --> ATGATTCGATGAGAGGAATGAACGATCCAGATTATGATATGTGGGAGGAA
RH35AK80       --> ATGATTCGATGAGAGGAATGAACGATCCAGATTATGATATGTGGGAGGAA
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ATGATTCGAT........................................
ET0128299      --> ATGATTCGATGAGAGGAATGAACGATCCAGATTATGATA...........
ET0025464      --> ATGATTCGATGAGAGGAATGAACGATCCAGATTATGATATGTGGGAGGAA
ET0063614      --> ATGATTCGATGAGAGGAATGAACGATCCAGATTATGATATGTGGGAGGAA
ET0093136      --> ATGATTCGATGAGAGGAATGAACGATCCAGATTATGATATGTGGGAGGAA
CT0024700      --> ...................GAACGATCCAGATTATGATATGTGGGAGGAA
ET0000849      --> ..................................................

               651    -    701
RU05177        --> TGGATGGGATGGGAAGGAGCTGG-TATTAGGGACTACACATCTCATATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- TGGATGGGATGGGAAGGAGCTGG-TATTAGGGACTACACATCTCATATCA
CT0013078      <-- ..................................................
RH34AJ42       --> TGGATGGGATGGGAAGGAGCTGGGTATTAGGGACTACACATCTCATAT..
RH35AK80       --> TGGATGGGATGGGAAAGAGCTGG-TATTAGGGACTACACATCTCATATtc
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> TGGATGGGATGGGAAGGAGCTGG-TATTAGGGACTACACATCTCATATCA
ET0063614      --> TGGATGGGATGGGAAGGAGCTGG-TATTAGGGACTACACATCTCATATCA
ET0093136      --> TGGATGGGATGGGAAGGAGCTGG-TATTAGGGACTACACATCTCATATCA
CT0024700      --> TGGATGGGATGGGAAGGAGCTGG-TATTAGGGACTACACATCTCATATCA
ET0000849      --> ..................................................

               701    -    751
RU05177        --> ATCCCTACATTTAAAGAAGAATCAATTGTAATTAATCAATAGATGGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ATCCCTACATTTAAAGAAGAATCAATTGTAATTAATCAATAGATGGTTCA
CT0013078      <-- ..................................ATCAATAGATGGTTCA
RH34AJ42       --> ..................................................
RH35AK80       --> aattc.............................................
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ATCCCTACATTTAAAGAAGAATCAATTGTAATT.................
ET0063614      --> ATCCCTACATTTAAAGAAGAATCAATTGTAATTAATCAATAGATGGTTCA
ET0093136      --> ATCCCTACATTTAAAGAAGAATCAATTGTAATTAATCAATAGATGGTTCA
CT0024700      --> ATCCCTACATTTAAAGAAGAATCAATTGTAATTAATCAATAGATGGTTCA
ET0000849      --> ..................................................

               751    -    801
RU05177        --> AGCTTTACCCAAATCCTTTACAACCTGAATGGTTGTTCCTGTATATAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- AGCTTTACCCAAATCCTTTACAACCTGAATGGTTGTT.............
CT0013078      <-- AGCTTTACCCAAATCCTTTACAACCTGAATGGTTGCTCCTGTATATAATG
RH34AJ42       --> ..................................................
RH35AK80       --> ..................................................
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> AGCTTTACCCAAATCCTTTACAACCTGAATGGTTGT..............
ET0093136      --> AGCTTaccaatcttacac................................
CT0024700      --> AGCTTTACCCAAATCCTTTACAACCTGAATGGTTGTTCCTGTATATAATG
ET0000849      --> ..........................................ATATAATC

               801    -    851
RU05177        --> GAAGCAAGGATATATATATCCTTTTTGTACATATATCATGCTAGAGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ..................................................
CT0013078      <-- GAAGCAAGGATATATATATCCTTCTTGTACATATATCATGCTAGAGGTGA
RH34AJ42       --> ..................................................
RH35AK80       --> ..................................................
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> GAAGCAAGGATATATATATCCTTCTTGTACATATATCATGCTAGAGGTGA
ET0000849      --> GAAGCAAGGATATATATATCCTTTTTGTACATATATCATGCTAGAGGTGA

               851    -    901
RU05177        --> TCCTCGGGCATTTTACAAATGAAAAGTTCTCAAGAGTT-GCCTTCTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0022779      <-- ..................................................
CT0079929      <-- ..................................................
ET0115068      <-- ..................................................
CT0020090      <-- ..................................................
CT0043315      <-- ..................................................
CT0013078      <-- TCCCCGGGCATTTTACAAATGAAAAGTTCTCAAGAGTT-GCCTTCTTAAA
RH34AJ42       --> ..................................................
RH35AK80       --> ..................................................
ET0012462      --> ..................................................
ET0063577      --> ..................................................
ET0074911      --> ..................................................
CT0061884      --> ..................................................
ET0100883      --> ..................................................
ET0128299      --> ..................................................
ET0025464      --> ..................................................
ET0063614      --> ..................................................
ET0093136      --> ..................................................
CT0024700      --> TCCCCGGG..........................................
ET0000849      --> TCCTCGGGCATTTTACAAATGAAAAGTTCTCAAGAGTTTGCCTTCTTAAA

               901    -    951
RU05177        --> AAAAAA
                   ~~~~~~
CT0022779      <-- ......
CT0079929      <-- ......
ET0115068      <-- ......
CT0020090      <-- ......
CT0043315      <-- ......
CT0013078      <-- AAAAA.
RH34AJ42       --> ......
RH35AK80       --> ......
ET0012462      --> ......
ET0063577      --> ......
ET0074911      --> ......
CT0061884      --> ......
ET0100883      --> ......
ET0128299      --> ......
ET0025464      --> ......
ET0063614      --> ......
ET0093136      --> ......
CT0024700      --> ......
ET0000849      --> AAAAAA