1 - 51
RU05353 --> TTATATCAATGATCTGTGGCAATTACAACTTGTATCTGAATCAAA-TAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- TTATATCAATGATCTGTGGCAATTACAACTTGTATCTGAATCAAA-TA-G
ET0093553 <-- TTATATCAATGATCTGTGGCAATTACAACTTGTATCTGAATCAAA----T
ET0098332 <-- .TATATCAATGATCTGTGGCAATTACAACTTGTATCTGAATCAAA-TAAG
ET0098557 <-- ..ATATCAATGATCTGTGGCAATTACAACTTGTATCTGAATCAAAATAAG
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- ..................................................
ET0117455 --> ..................................................
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> ..................................................
CT0004629 --> ..................................................
51 - 101
RU05353 --> AGGGAAAAAAAAAAAAGGGAAAACACAACTCTGATAGACAGATCCAACAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- A---GGAAAAAAAAAAGGGA--ACACAACTCTGATAGACAGATCCAACAA
ET0093553 <-- AGGGAAAAAAAAAAA-GGGAAA-CACAACTCTGATAGACAGATCCAACAA
ET0098332 <-- AGGGAAAAAAAAAAAGGGGAAAACACAACTCTGATAGACAGATCCAACAA
ET0098557 <-- AGGGAAAAAAAAAAAAGGGGAAACACAACTCTGATAGACAGATCCAACAA
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- ..................................................
ET0117455 --> ..................................................
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> ..................................................
CT0004629 --> ..................................................
101 - 151
RU05353 --> AGAACAATGAGAATTTGAATTTGCTAACATCTAAATCAGAATTAAGGTAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- AGAACAATGAGAATTTGAATTTGCTAACATCTAAATCAGAATTAAGGTAC
ET0093553 <-- AGAACAATGAGAATTTGAATTTGCTAACATCTAAATCAGAATTAAGGTAC
ET0098332 <-- AGAACAATGAGAATTTGAATTTGCTAACATCTAAATCAGAATTAAGGTAC
ET0098557 <-- AGAACAATGAGAATTTGAATTTGCTAACATCTAAATCAGAATTAAGGTAC
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- ..................................................
ET0117455 --> ..................................................
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> ..................................................
CT0004629 --> ..................................................
151 - 201
RU05353 --> ACAGATCCATACAAATTGCACCAATAAAACCACCCTACACATATTTATAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ACAGATCCATACAAATTGCACCAATAAAACCACCCTACACATATTTATAA
ET0093553 <-- ACAGATCCATACAAATTGCACCAATAAAACCACCCTACACATATTTATAA
ET0098332 <-- ACAGATCCATACAAATTGCACCAATAAAACCACCCTACACATATTTATAA
ET0098557 <-- ACAGATCCATACAAATTGCACCAATAAAACCACCCTACACATATTTATAA
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- ..................................................
ET0117455 --> ..................................................
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> ..................................................
CT0004629 --> ..................................................
201 - 251
RU05353 --> GACAAAATTGTCAACTTATTTTCTTTTCTGGAAAACAAAAAAGAA-TCTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- GACAAAATTGTCAACTTATTTTCTTTTCTGGAAAACAAAAA-GAA-TCTA
ET0093553 <-- GACAAAATTGTCAACTTATTTTCTTTTCTGGAAAACAAAAAAGAA-TCTA
ET0098332 <-- GACAAAATTGTCAACTTATTTTCTTTTCTGGAAAACAAAAAAGAA-TCTA
ET0098557 <-- GACAAAATTGTCAACTTATTTTCTTTTCTGGAAAACAAAAAAGAA-TCTA
ET0038017 <-- ....................................AAAAAAGAAATCTA
ET0138962 <-- ..................................................
ET0041032 <-- ..................................................
ET0117455 --> ..............................................TCTA
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> ..................................................
CT0004629 --> ..................................................
251 - 301
RU05353 --> TATATGAATTAACTAATTATACCAATGGCGGAGAAGATCAACCGCGAGCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- TATATGAATTAAactaaat...............................
ET0093553 <-- TATATGAATTAACTAAT.................................
ET0098332 <-- TATATGAATTAACTAAT.................................
ET0098557 <-- TATATGAATTAACTAAT.................................
ET0038017 <-- TATATGAATTAACTAATTATACCAATGGCGGAGGAGATCAACCGCGAGCA
ET0138962 <-- ............CTAATTATACCAATGGCGGAGAAGATCAACCGCGAGCA
ET0041032 <-- ..................................................
ET0117455 --> TATATGAATTAACTAATTATACCAATGGCGGAAAAGATCAACCGCGAGCA
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> ..................................................
CT0004629 --> ..................................................
301 - 351
RU05353 --> GCGGCCATGGCCGGGGCGGTGGCGGCGGCGACATTGGAGGCTGCGCCGTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ..................................................
ET0093553 <-- ..................................................
ET0098332 <-- ..................................................
ET0098557 <-- ..................................................
ET0038017 <-- GCGGCCATGGCCGGGGCGGTGGCGGCGGCGACATTGGAGGCGGCGCCGTT
ET0138962 <-- GCGGCCATGGCCGGGGCGGTGGCGGCGGCGACATTGGAGGCTGCGCCGTT
ET0041032 <-- ..................................................
ET0117455 --> GCGGCCATGGCCGGGGCGGTGGCGGCGGCGACATTGGAGGCTGCGCCGTT
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> ..................................................
CT0004629 --> ..................................................
351 - 401
RU05353 --> GAGGAATGATAGGAATCCGGTGGAGGCGGAAGTGTCTTGCTCATCCAAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- .................................................. Ethylene
ET0093553 <-- .................................................. Ethylene
ET0098332 <-- .................................................. Ethylene
ET0098557 <-- .................................................. Ethylene
ET0038017 <-- GAGGAATGATAGGAATCCGGTGGAGGCGGAAGTGTCTTGCTCATCCAAGA Ethylene
ET0138962 <-- GAGGAATGATAGGAATCCGGTGGAGGCGGAAGTGTCTTGCTCATCCAAGA Ethylene
ET0041032 <-- .................................................. Ethylene
ET0117455 --> GAGGAATGATAGGAATCCGGTGGAGGCGGAAGTGTCTTGCTCATCCAAGA Ethylene
CT0012457 --> ........................GGCGGAAGTATCTTGCTCATCCAAGA Control
CT0046219 --> ........................GGCGGAAGTATCTTGCTCATCCAAGA Control
ET0027046 --> .................................................. Ethylene
CT0004629 --> .................................................. Control
401 - 451
RU05353 --> ACAGATCCTCGGGAACCC-TAA-TGGCACCGTGAACGAGGACGACGGCGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ..................................................
ET0093553 <-- ..................................................
ET0098332 <-- ..................................................
ET0098557 <-- ..................................................
ET0038017 <-- ACAGATCCTCGGGAACCC-TAA-TGGCACCGTGAACGAGGACGACGGCGA
ET0138962 <-- ACAGATCCTCGGGAACCC................................
ET0041032 <-- ..................................................
ET0117455 --> ACAGATCCTCGGGAACCCGTAACTGGCACCGTGAACGAGGACGACGGCGA
CT0012457 --> ACAGATCCTCGGGAACCC-TAA-TGGCACCGTGAACGAGGACGACGGCGA
CT0046219 --> ACAGATCCTCGGGAACCC-TAA-TGGCACCGTGAACGAGGACGACGGCGA
ET0027046 --> ..................................................
CT0004629 --> ..................................................
451 - 501
RU05353 --> CTCCGACCATGAGAGCGGAGATGAGGACGGATCCGACGGAGGTGAGGAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ..................................................
ET0093553 <-- ..................................................
ET0098332 <-- ..................................................
ET0098557 <-- ..................................................
ET0038017 <-- CTCCGACCATGAGAGCGGAGATGAG.........................
ET0138962 <-- ..................................................
ET0041032 <-- ..................................................
ET0117455 --> CTCCGACCATGAGAGCGGAGATGAGGACGGATCCGACGG...........
CT0012457 --> CTCCGACCATGAGAGCGGAGATGAGGACGGATCCGACGGAGGTGAGGAAG
CT0046219 --> CTCCGACCATGAGAGCGGAGATGAGGACGGATCCGACGGAGGTGAGGAAG
ET0027046 --> ..................................................
CT0004629 --> ..................................................
501 - 551
RU05353 --> ACGACGAAGACGCTGAGGCCGACGAGGCCCATTAGGGTTTGGGTGTCGGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ..................................................
ET0093553 <-- ..................................................
ET0098332 <-- ..................................................
ET0098557 <-- ..................................................
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- ..........................acccaaaccctaaTGGGTGTCGGA
ET0117455 --> ..................................................
CT0012457 --> ACGACGAAGACGCTGAGGCCGACGAGGCCCATTAGGGTTTGGGTGTCGGA
CT0046219 --> ACGACGAAGACGCTGAGGCCGACGAGGCCCATTAGGGTTTGGGTGTCGGA
ET0027046 --> ..................................................
CT0004629 --> ..................................................
551 - 601
RU05353 --> GAAAGTCCGGCCGAAGATAACGAGGGGCTGATCGGAGGGGCGGAAGAGGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ..................................................
ET0093553 <-- ..................................................
ET0098332 <-- ..................................................
ET0098557 <-- ..................................................
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- GAAAGTGCGGCCGAAGATAACGAGGGGCTGATCGGAGGGGCGGAAGAGGT
ET0117455 --> ..................................................
CT0012457 --> GAAAGTCCGGCCGAAGATAACGAGGGGCTGATCGGAGGGGCGGAAGAG..
CT0046219 --> GAAAGTCCGGCCGAAGATAACGAGGGGCTGATCGGAGGG...........
ET0027046 --> ........gtttgggggaaatGAGGGGCTGATCGGAGGGGCGGAAGAGGT
CT0004629 --> ..............................ATCGGAGGGGCGGAAGAGGT
601 - 651
RU05353 --> AGAGGAAGAGCCAGGCGGCGAGGAGGCCGAGGAGGACGACGAGGGAGAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ..................................................
ET0093553 <-- ..................................................
ET0098332 <-- ..................................................
ET0098557 <-- ..................................................
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- AGAGGAAGAGCCAGGCGGCGAGGAGGCCGAGGAGGACGACGAGGGAGAAG
ET0117455 --> ..................................................
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> AGAGGAAGAGCCAGGCGGCGAGGAGGCCGAGGAGGACGACGAGGGAGAAG
CT0004629 --> AGAGGAAGAGCCAGGCGGCGAGGAGGCCGAGGAGGACGACGAGGGAGAAG
651 - 701
RU05353 --> GGGTGGGTGAAGAGGGAGACGGCGACGATGAGGGCGACGGCGGCGAGGTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ..................................................
ET0093553 <-- ..................................................
ET0098332 <-- ..................................................
ET0098557 <-- ..................................................
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- GGGTGGGTGAAGAGGGAGACGGCGACGATGAGGGCGACG...........
ET0117455 --> ..................................................
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> GGGTGGGTGAAGAGGGAGACGGCGACGATGAGGGCGACGGCGGCGAGGTA
CT0004629 --> GGGTGGGTGAAGAGGGAGACGGCGACGATGAG..................
701 - 751
RU05353 --> GTTGACGCGGAAGTAGGAGTAGTTCTTGCGGCGGCTTCTGAAGATGAGAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ..................................................
ET0093553 <-- ..................................................
ET0098332 <-- ..................................................
ET0098557 <-- ..................................................
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- ..................................................
ET0117455 --> ..................................................
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> GTTGACGCGGAAGTAGGAGTAGTTCTTGCGGCGGCTTCTGAAGATGAGAG
CT0004629 --> ..................................................
751 - 801
RU05353 --> ACTTCCACCATGGGAGGCTTGTGGATGGGTGGTTTGTGGTGGTCTGCGGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0087080 <-- ..................................................
ET0093553 <-- ..................................................
ET0098332 <-- ..................................................
ET0098557 <-- ..................................................
ET0038017 <-- ..................................................
ET0138962 <-- ..................................................
ET0041032 <-- ..................................................
ET0117455 --> ..................................................
CT0012457 --> ..................................................
CT0046219 --> ..................................................
ET0027046 --> ACTTCCACCATGGGAGGCTTGTGGATGGGTGGTTTGTGGTGGTCTGCGGG
CT0004629 --> ..................................................
801 - 851
RU05353 --> ATGGGTAG
~~~~~~~~
ET0087080 <-- ........
ET0093553 <-- ........
ET0098332 <-- ........
ET0098557 <-- ........
ET0038017 <-- ........
ET0138962 <-- ........
ET0041032 <-- ........
ET0117455 --> ........
CT0012457 --> ........
CT0046219 --> ........
ET0027046 --> ATGGGTAG
CT0004629 --> ........
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