SNPs of unigene RU05427
               1      -     51
RU05427        --> TTTTTTTTCACAGTTTAAGAGCTTCAATTGAAATAA-CT-AAGGCTT-CA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- .........................ttTTGAAATAA-CT-AAGGCTT-CA
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> TTTTTTTTCACAGTTTAAGAGCTTCAATTGAAATAA-CT-AAGGCTT-CA
ET0064987      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0066062      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0072912      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0073666      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0080058      --> .............................GAAATAAACT-AAGGCTT-CA
ET0086678      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0088156      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0089272      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0089971      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0089997      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0091829      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0092244      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0093302      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0094282      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0095374      --> ............................aGAAATAA-CT-AAGGCTT-CA
ET0095470      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0096452      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0097793      --> ............................aGAAATAA-CT-AAGGCTT-CA
ET0097838      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0101639      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0102078      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0104757      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0105326      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0109179      --> .............................GAAATAA-CT-AAGGCTT-CA
ET0072653      --> ............................gaAAATAA-CT-AAGGCTT-CA
ET0100762      --> ...........................agaAAATAAACT-AAGGCTT-CA
ET0102423      --> ...........................agaAAATAA-CT-AAGGCTT-CA
ET0092922      --> ...........................gtaaatTAA-CTTAAGGCTT-CA
ET0098426      --> ...........................gtaaatTAA-CTTAAGGCTTTCA
ET0099691      --> .............................aaatTAA-CTTAAGGCTT-CA
ET0109185      --> .........................aagaaaataaactaaaggacttaCA
ET0070925      --> ..........................gtaaattaacttaaggtctttctA
ET0096416      --> .........................gtaaattaacttaaggtctttctat
ET0104454      --> .........................gtaaattaacttaaggtctttctat
ET0107177      --> .........................gtaaattaacttaaggtctttctat
CT0109563      --> ............................................tttttt
ET0099966      --> ......................gtaaattaacttaaggtctttctattag
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               51     -    101
RU05427        --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0111911      <-- ...............GTAGAATGACAATGATATATATAGAAGCAACAAGC
ET0112023      <-- ...............GTAGAATGACAATGATATATATAGAAGCAACAAGC
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0064987      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0066062      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0072912      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0073666      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0080058      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0086678      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0088156      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0089272      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0089971      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0089997      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0091829      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0092244      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0093302      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0094282      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0095374      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0095470      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0096452      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0097793      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0097838      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0101639      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0102078      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0104757      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0105326      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0109179      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0072653      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0100762      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0102423      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0092922      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0098426      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0099691      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0109185      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0070925      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0096416      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0104454      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
ET0107177      --> TAGAATCATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
CT0109563      --> tgtAATCATAAGCGTGTAGAATGACAATGATATATATAGAAGCAACAAGC
ET0099966      --> taattctATAAGCGTGTAGAATGACAATGATATATA--GAAGCAACAAGC
CT0007645      --> ..............ggttGAATGACAATGATATATATAGAAGCAACAAGC
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               101    -    151
RU05427        --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- TTAAACTAGTAACTACAGTTCACAACAAAACAAAAA-G-AAACACTGCTA
ET0111911      <-- TTAAACTAGTAACTACAGTTCACAACAAAACAAAAA-G-AAACACTGCTA
ET0112023      <-- TTAAACTAGTAACTACAGTTCACAACAAAACAAAAA-G-AAACACTGCTA
ET0068478      <-- .....................ACAACAAAACAAAAAAGAAAACACTGCTA
ET0071803      <-- ..........................................aACTGCTA
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> TTAAACTAGTAACTA...................................
ET0064987      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0066062      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0072912      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0073666      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0080058      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0086678      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0088156      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0089272      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0089971      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0089997      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0091829      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0092244      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0093302      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0094282      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0095374      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0095470      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0096452      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0097793      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0097838      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0101639      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0102078      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0104757      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0105326      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0109179      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0072653      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0100762      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0102423      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0092922      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0098426      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0099691      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0109185      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0070925      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0096416      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0104454      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
ET0107177      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
CT0109563      --> TTAAACTAGTAACTACAGTTCACAACAAAACAAAAA-G-AAACACTGCTA
ET0099966      --> TTAAACTAGTAACTACAGTTCACAACAAA-CAAAAA-G-AAACACTGCTA
CT0007645      --> TTAAACTAGTAACTACAGTTCACAACAAAACAAAAA-G-AAACACTGCTA
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               151    -    201
RU05427        --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0111911      <-- TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0112023      <-- TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0068478      <-- TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0071803      <-- TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0066062      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0072912      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0073666      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0080058      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0086678      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0088156      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0089272      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0089971      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0089997      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0091829      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0092244      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0093302      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0094282      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0095374      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0095470      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0096452      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0097793      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0097838      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0101639      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0102078      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0104757      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0105326      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0109179      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0072653      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0100762      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0102423      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0092922      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0098426      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0099691      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0109185      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0070925      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0096416      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0104454      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0107177      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
CT0109563      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0099966      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
CT0007645      --> TGCTACAATAAACAGAATAGGTTCGGAAAATGTCCCTTTTATCATGGTAT
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               201    -    251
RU05427        --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- TG--TAA-GCCAATGTTCATACCC..........................
ET0111911      <-- TG--TAA-GCCAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0112023      <-- TG--TAA-GCCAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0068478      <-- TG--TAA-GCCAATGTTCATACCC-TTTTTGCTTCCTCATGCAGGCCTGA
ET0071803      <-- TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0144390      <-- ....................ACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0146878      <-- ....................ACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0147223      <-- ....................ACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0146019      <-- ......................................ATGCAGGCCTGA
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0066062      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0072912      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0073666      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0080058      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0086678      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0088156      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0089272      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0089971      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0089997      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0091829      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0092244      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0093302      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0094282      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0095374      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0095470      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0096452      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0097793      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0097838      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0101639      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0102078      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0104757      --> TGTGAAAAGCTAATGTTCATACCCCTTTT-GCTTCCTCATGCAGGCCTGA
ET0105326      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0109179      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0072653      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0100762      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0102423      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0092922      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0098426      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0099691      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0109185      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0070925      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0096416      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0104454      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0107177      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
CT0109563      --> TGT--AA-GCCAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0099966      --> TGTGAAA-GCTAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
CT0007645      --> TGT--AA-GCCAATGTTCATACCC-TTTT-GCTTCCTCATGCAGGCCTGA
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               251    -    301
RU05427        --> TTT-CTCAT-CTTTCATTCAACCTTCGACATCAAT-CTTTAGATCAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- TTT-CTCAT-CTTTCATTCAACCTTCGACATCAAT-CTTTAGATCAGTCA
ET0112023      <-- TTT-CTCAT-CTTTCATTCAACCTTCGACATCAAT-CTTTAGATCAGTCA
ET0068478      <-- TTT-CTCAT-CTTTCATTCAACCTTCGACATCAAT-CTTTAGATCAGTCA
ET0071803      <-- TTT-CTCAT-CTTTCATTCAACCTTCGACATCAAT-CTTTAGATCAGTCA
ET0144390      <-- TTT-CTCAT-CTTTCATTCAACCTTCGACATCAAT-CTTTAGATCAGTCA
ET0146878      <-- TTT-CTCAT-CTTTCATTCAACCTTCGACATCAAT-CTTTAGATCAGTCA
ET0147223      <-- TTT-CTCAT-CTTTCATTCAACCTTCGACATCAAT-CTTTAGATCAGTCA
ET0146019      <-- TTT-CTCAT-CTTTCATTCAACCTTCGACATCAAT-CTTTAGATCAGTCA
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0066062      --> TTT-CTCAT-CTTTCATTCAACCTTCGACATC..................
ET0072912      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0073666      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0080058      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0086678      --> TTT-CTCAT-CTTTCATTCAACCTTCGACA....................
ET0088156      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0089272      --> TTT-CTCAT-CTTTCATTCAACCTTCGACATC..................
ET0089971      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0089997      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0091829      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0092244      --> TTT-CTCATTCTTTCATTCAACCTTCGACAT...................
ET0093302      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0094282      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0095374      --> TTT-C-CAT-CTTTCATTCAACCTTCGACAT...................
ET0095470      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0096452      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0097793      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0097838      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0101639      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0102078      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0104757      --> TTT-CTCAT-C.......................................
ET0105326      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0109179      --> TTT-C-CAT-CTTTCATTCAACCTTCGACATC..................
ET0072653      --> TTT-CTCAT-CTTTCATTCAACCTTCGACA....................
ET0100762      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0102423      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0092922      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0098426      --> TTT-CTCAT-CTTTCATTCAACCTTCGACA....................
ET0099691      --> TTTTCTCAT-CTTTCATTCAACCTTCGACAT...................
ET0109185      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0070925      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0096416      --> TTT-C-CAT-CTTTCATTCAACCTTCGACATC..................
ET0104454      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
ET0107177      --> TTT-CTCAT-CTTTCATTCAACCTTCGACAT...................
CT0109563      --> TTT-CTCAT-CTTTCATTCAACCTTCGACATCAATACTTTAGtatca...
ET0099966      --> TTT-CTCAT-CTTTCATTCAACCTTCGACA....................
CT0007645      --> TTT-CT............................................
ET0083509      --> ........................................AGATCAGTCA
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               301    -    351
RU05427        --> ATCTTCACAGAGGCGTAAATCTTCCGAACAAACCAGAAGCATGCATAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ATCTTCACA.........................................
ET0112023      <-- ATCTTCACA.........................................
ET0068478      <-- ATCTTCACAGAGGCGTAAATCTTCCGAACAAACCAGAAGCATGCATAGAA
ET0071803      <-- ATCTTCACAGAGGCGTAAATCTTCCGAACAAACCAGAAGCATGCATAGAA
ET0144390      <-- ATCTTCACAGAGGCGTAAATCTTCCGAACAAACCAGAAGCATGCATAGAA
ET0146878      <-- ATCTTCACAGAGGCGTAAATCTTCCGAACAAACCAGAAGCATGCATAGAA
ET0147223      <-- ATCTTCACAGAGGCGTAAATCTTCCGAACAAACCAGAAGCATGCATAGAA
ET0146019      <-- ATCTTCACAGAGGCGTAAATCTTCCGAACAAACCAGAAGCATGCATAGAA
CT0106589      <-- ......................ccgtAACAAACCAGAAGCATGCATAGAA
ET0005282      <-- ............................................ATAGAA
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ATCTTCACAGAGGCGTAAATCTTCCGAACAAACCAGAAGCATGCATAGAA
CT0001492      --> ..............................................AGAA
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               351    -    401
RU05427        --> ACCAATAGTTCCAGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ACCAATAGTTCCAGTCAAGACA............................
ET0071803      <-- ACCAATAGTTCCAGTCAAGACAAAGAAAGCATA.................
ET0144390      <-- ACCAATAGTTCCAGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
ET0146878      <-- ACCAATAGTTCCAGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
ET0147223      <-- ACCAATAGTTCCAGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
ET0146019      <-- ACCAATAGTTCCAGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
CT0106589      <-- ACCAATAGTTCCAGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
ET0005282      <-- ACCAATAGTTCCAGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ACCAATAGTTCCAGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
CT0001492      --> ACCAATAGTTCCAGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
CT0015142      --> ............AGTCAAGACAAAGAAAGCATACGAAACGATCAACATGT
CT0102374      --> ................................................GT
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               401    -    451
RU05427        --> ACCCAAAGTAGAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ACCCAAAGTAGAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
ET0146878      <-- ACCCAAAGTAGAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
ET0147223      <-- ACCCAAAGTAGAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
ET0146019      <-- ACCCAAAGTAGAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
CT0106589      <-- ACCCAAAGTAAAGGATGCCTGAAACAAACTTAGTGTATCTCCAACTTGGT
ET0005282      <-- ACCCAAAGTAAAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
RH43BL6        <-- ACCCAAAGTAGAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
RH44BK42       <-- ACCCAAAGTAGAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ACCCAAAGTAAAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
CT0001492      --> ACCCAAAGTAAAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
CT0015142      --> ACCCAAAGTAAAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACT....
CT0102374      --> ACCCAAAGTAAAGGATGCCTGAAACAAACTTAGTG-ATCTCCAACTTGGT
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               451    -    501
RU05427        --> AAAAAA-GTAGAAGGCAGAGTAGAGAAGAAGGTAAAGGGCAGACGAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- AAAAAA-GTAGAAGGCAGAGTAGAGAAGAAGGTAAAGGGCAGACGAGCCT
ET0146878      <-- AAAAAA-GTAGAAGGCAGAGTAGAGAAGAAGGTAAAGGGCAGACGAGCCT
ET0147223      <-- AAAAAA-GTAGAAGGCAGAGTAGAGAAGAAGGTAAAGGGCAGACGAGCCT
ET0146019      <-- AAAAAA-GTAGAAGGCAGAGTAGAGAAGAAGGTAAAGGGCAGACGAGCCT
CT0106589      <-- AAAAAA-GTAGAAGGCAGAGTAGAGGAGAAGGTAAAGGGCAGACGAGCCT
ET0005282      <-- AAAAAA-GTAGAAGGCAGAGTAGAGGAGAAGGTAAAGGGCAGACGAGCCT
RH43BL6        <-- AAAAAA-GTAGAAGGCAGAGTAGAGAAGAAGGTAAAGGGCAGACGAGCCT
RH44BK42       <-- AAAAAA-GTAGAAGGCAGAGTAGAGAAGAAGGTAAAGGGCAGACGAGCCT
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> AAAAAAAGTAGAAGGCAGA...............................
CT0001492      --> AAAAAA-GTAGAAGGCAGAGTAGAGGAGAAGGTAAAGGGCAGACGAGCCT
CT0015142      --> ..................................................
CT0102374      --> AAAAAA-GTAGAAGGCAGAGTAGAGGAGAAGGTAAAGGGCAGACGAGCCT
CT0105984      --> ........................ggAGAAGGTAAAGGGCAGACGAGCCT
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               501    -    551
RU05427        --> GCGGTCAGGTATGATCTCCACCACCAGTGGTAATCTTC-ACTGCACAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- GCGGTCAGGTATGATCTCCACCACCAGTGGTAATC...............
ET0146878      <-- GCGGTCAGGTATGATCTCCACCACCAGTGGTAATC...............
ET0147223      <-- GCGGTCAGGTATGATCTCCACCACCAGTGGTAAat...............
ET0146019      <-- GCGGTCAGGTATGATactaccaaccaaccaagtaggtaaatac.......
CT0106589      <-- GCGGTCAGGTATGATCTCCACCACCAGTGGTAATCTTC-ACTGCACAACT
ET0005282      <-- GCGGTCAGGTATGATCTCCACCACCAGTGGTAATCTTC-ACTGCACAACT
RH43BL6        <-- GCGGTCAGGTATGATCTCCACCACCAGTGGTAATCTTC-ACTGCACAACT
RH44BK42       <-- GCGGTCAGGTATGATCTCCACCACCAGTGGTAATCTTC-ACTGCACAACT
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> GCGGTCAGGTATGATCTCCACCACCAGTGGTAATCTTCTACTGCACAACT
CT0015142      --> ..................................................
CT0102374      --> GCGGTCAGGTATGATCTCCACCACCAGTGGTAATCTTC-ACTGCACAACT
CT0105984      --> GCGGTCAGGTATGATCTCCACCACCAGTGGTAATCTTC-ACTGCACAACT
ET0119504      --> ..................CACCACCAGTGGTAATCTTC-ACTGCACAACT
ET0122395      --> ..................CACCACCAGTGGTAATCTTC-ACTGCACAACT
ET0069434      --> ..........................GTGGTAATCTTC-ACTGCACAACT
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               551    -    601
RU05427        --> -GGAAGTAGCAGAGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- -GGAAGTAGCAGAGCACCATCGTT..........................
ET0005282      <-- -GGAAGTAGCAGAGCACCATCGTTATCT......................
RH43BL6        <-- -GGAAGTAGCAGAGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
RH44BK42       <-- -GGAAGTAGCAGAGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
CT0026459      <-- ............AGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> AGGAAG............................................
CT0015142      --> ..................................................
CT0102374      --> -GGAAGTAGCAGAGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
CT0105984      --> -GGAAGTAGCAGAGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
ET0119504      --> -GGAAGTAGCAGAGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
ET0122395      --> -GGAAGTAGCAGAGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
ET0069434      --> -GGAAGTAGCAGAGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
CT0013605      --> ......TAGCAGAGCACCATCGTTATCTCCGCACAAGTGATTAAAAGGAT
ET0111614      --> ...............................................GAT
CT0037198      --> ..................................................
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               601    -    651
RU05427        --> GACAAAAACAATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................  Control
ET0111911      <-- ..................................................  Ethylene
ET0112023      <-- ..................................................  Ethylene
ET0068478      <-- ..................................................  Ethylene
ET0071803      <-- ..................................................  Ethylene
ET0144390      <-- ..................................................  Ethylene
ET0146878      <-- ..................................................  Ethylene
ET0147223      <-- ..................................................  Ethylene
ET0146019      <-- ..................................................  Ethylene
CT0106589      <-- ..................................................  Control
ET0005282      <-- ..................................................  Ethylene
RH43BL6        <-- GACAAAAACAATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  WaterDS
RH44BK42       <-- GACAAAAACAATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  WaterDS
CT0026459      <-- GACAAAAACGATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  Control
CT0119793      <-- .............AAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  Control
CT0129602      <-- ...................................TAGAACTGGTTCAGC  Control
CT0131682      <-- ...................................TAGAACTGGTTCAGC  Control
CT0128782      <-- ..................................................  Control
CT0131685      <-- ..................................................  Control
CT0025430      --> ..................................................  Control
ET0064987      --> ..................................................  Ethylene
ET0066062      --> ..................................................  Ethylene
ET0072912      --> ..................................................  Ethylene
ET0073666      --> ..................................................  Ethylene
ET0080058      --> ..................................................  Ethylene
ET0086678      --> ..................................................  Ethylene
ET0088156      --> ..................................................  Ethylene
ET0089272      --> ..................................................  Ethylene
ET0089971      --> ..................................................  Ethylene
ET0089997      --> ..................................................  Ethylene
ET0091829      --> ..................................................  Ethylene
ET0092244      --> ..................................................  Ethylene
ET0093302      --> ..................................................  Ethylene
ET0094282      --> ..................................................  Ethylene
ET0095374      --> ..................................................  Ethylene
ET0095470      --> ..................................................  Ethylene
ET0096452      --> ..................................................  Ethylene
ET0097793      --> ..................................................  Ethylene
ET0097838      --> ..................................................  Ethylene
ET0101639      --> ..................................................  Ethylene
ET0102078      --> ..................................................  Ethylene
ET0104757      --> ..................................................  Ethylene
ET0105326      --> ..................................................  Ethylene
ET0109179      --> ..................................................  Ethylene
ET0072653      --> ..................................................  Ethylene
ET0100762      --> ..................................................  Ethylene
ET0102423      --> ..................................................  Ethylene
ET0092922      --> ..................................................  Ethylene
ET0098426      --> ..................................................  Ethylene
ET0099691      --> ..................................................  Ethylene
ET0109185      --> ..................................................  Ethylene
ET0070925      --> ..................................................  Ethylene
ET0096416      --> ..................................................  Ethylene
ET0104454      --> ..................................................  Ethylene
ET0107177      --> ..................................................  Ethylene
CT0109563      --> ..................................................  Control
ET0099966      --> ..................................................  Ethylene
CT0007645      --> ..................................................  Control
ET0083509      --> ..................................................  Ethylene
CT0001492      --> ..................................................  Control
CT0015142      --> ..................................................  Control
CT0102374      --> GACAAAAACGATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  Control
CT0105984      --> GACAAAAACGATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  Control
ET0119504      --> GACAAAAACGATGAAAAAGGAACCCGAATATGTAATAGAACTGGTTCAGC  Ethylene
ET0122395      --> GACAAAAACGATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  Ethylene
ET0069434      --> GACAAAAACAATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  Ethylene
CT0013605      --> GACAAAAACGATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  Control
ET0111614      --> GACAAAAACGATGAAAA-GGAACCCGAATATGTAATAGAACTGGTTCAGC  Ethylene
CT0037198      --> ..................................................  Control
ET0051670      --> ..................................................  Ethylene
ET0056855      --> ..................................................  Ethylene
ET0084699      --> ..................................................  Ethylene

               651    -    701
RU05427        --> CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
RH44BK42       <-- CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
CT0026459      <-- CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
CT0119793      <-- CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
CT0129602      <-- CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
CT0131682      <-- CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> CAAA..............................................
CT0105984      --> CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
ET0119504      --> CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
ET0122395      --> CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
ET0069434      --> CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAAATG
CT0013605      --> CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
ET0111614      --> CAAATTGATGTCAAGATAAAGAACAGCTCAATGAAAACAGCTCCAAA-TG
CT0037198      --> ..........................CTCAATGAAAACAGCTCCAAA-TG
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               701    -    751
RU05427        --> GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
RH44BK42       <-- GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
CT0026459      <-- GAA...............................................
CT0119793      <-- GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
CT0129602      <-- GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
CT0131682      <-- GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> GAAGGATGCCTCCAATAAG...............................
ET0119504      --> GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
ET0122395      --> GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
ET0069434      --> GAAGGATGCCTCCAAT..................................
CT0013605      --> GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
ET0111614      --> GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
CT0037198      --> GAAGGATGCCTCCAATAAGTATTGAGAAGACTGGTTTCATATACCATGCC
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               751    -    801
RU05427        --> TGTTCTGGTACCTGCCGTGGAATTTTGTTAGTCTTTACAGGGTCTTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- TGTTCTGGT.........................................
RH44BK42       <-- TGTTCTGGT.........................................
CT0026459      <-- ..................................................
CT0119793      <-- TGTTCTGGTACCTGCCGTGGAATTTTGTTAGTCTTTACAGGGTCTTCAAC
CT0129602      <-- TGTTCTGGTACCTGCCGTGGAATTTTGTTAGTCTTTACAGGGTCTTCAAC
CT0131682      <-- TGTTCTGGTACCTGCCGTGGAATTTTGTTAGTCTTTACAGGGTCTTCAAC
CT0128782      <-- TGTTCTGGTACCTGCCGTGGAATTTTGTTAGTCTTTACAGGGTCTTCAAC
CT0131685      <-- .......................TTTGTTAGTCTTTACAGGGTCTTCAAC
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> TGTTCTGGTA........................................
ET0122395      --> TGTTCTGGTA........................................
ET0069434      --> ..................................................
CT0013605      --> TGTTCTGGTACCTGCCGTGGAATTTTGTTAGTCTTTACAGGGTCTTCAAC
ET0111614      --> TGTTCTGGTACCTGCCGTGGAATTTTGTTAGTCTTTACAGGGTCTTCA..
CT0037198      --> TGTTCTGGTACCTGCCGTGGAATTTTGTTAGTCTTTACAGGGTCTTCAAC
ET0051670      --> ..................................................
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               801    -    851
RU05427        --> AGCTGGCTTTTT-GAACCCTAAATAACTACCCACAAAGACCAAAGGCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- AGCTGGCTTTTT-GAACCCTAAATAACTACCCACAAAGACCAAAGGCACT
CT0129602      <-- AGCTGGCTTTTT-GAACCCTAAATAA........................
CT0131682      <-- AGCTGGCTTTTT-GAACCCTAAATAA........................
CT0128782      <-- AGCTGGCTTTTT-GAACCCTAAATAACTACCCACAAAGACCAAAGGCACT
CT0131685      <-- AGCTGGCTTTTT-GAACCCTAAATAA........................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> AG................................................
ET0111614      --> ..................................................
CT0037198      --> AGCTGGCTTTTT-GAACCCTAAATAACTA.....................
ET0051670      --> ..CTGGCTTTTTTGAACCCTAAATAACTACCCACAAAGACCAAAGGCACT
ET0056855      --> ..................................................
ET0084699      --> ..................................................

               851    -    901
RU05427        --> GAAATTCCAAACCATAAGCAAACCAAAGCAATCATTGTCCCAAAGGGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- GAAATTCCAAACCATAAGCAAACCAAAGC.....................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- GAAATTCCAAACCATAAGCAAACCAAAGCAATCATTGTCCCAAAGGG...
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> GAAATTCCAAACCATAAGCAAACCAAAGCAATCATTGTCCCAAAGGGCAC
ET0056855      --> ...............AAGCAAACCAAAGCAATCATTGTCCCAAAGGGCAC
ET0084699      --> ...............AAGCAAACCAAAGCAATCATTGTCCCAAAGGGCAC

               901    -    951
RU05427        --> GGCTCCAGAAGATTTCTCCCCCCAAATTAGGGCATTTAGCACAAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> GGCTCCAGAAGATTTCTCCCCCCAAATTAGGGCATTTAGCACAAAGAAGA
ET0056855      --> GGCTCCAGAAGATTTCTCCCCCCAAATTAGGGCATTTAGCACAAAGAAGA
ET0084699      --> GGCTCCAGAAGATTTCTCCCCCCAAATTAGGGCATTTAGCACAAAGAAGA

               951    -   1001
RU05427        --> CAGCAAACAGAATTCCTGGGAACATAAATGCAGTCTTCAAAGTATTCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> CAGCAAACAGAATTCCTGGGAACATAAATGCAGTCTTCAAAGTATTCCTC
ET0056855      --> CAGCAAACAGAATTCCTGGGAACATAAATGCAGTCTTCAAAGTATTCCTC
ET0084699      --> CAGCAAACAGAATTCCTGGGAACATAAATGCAGTCTTCAAAGTATTCCTC

               1001   -   1051
RU05427        --> TTCCACTCTGTACCCTTGAACATCTTGTACAATCGTGCAGAAGAATAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ..................................................
ET0111911      <-- ..................................................
ET0112023      <-- ..................................................
ET0068478      <-- ..................................................
ET0071803      <-- ..................................................
ET0144390      <-- ..................................................
ET0146878      <-- ..................................................
ET0147223      <-- ..................................................
ET0146019      <-- ..................................................
CT0106589      <-- ..................................................
ET0005282      <-- ..................................................
RH43BL6        <-- ..................................................
RH44BK42       <-- ..................................................
CT0026459      <-- ..................................................
CT0119793      <-- ..................................................
CT0129602      <-- ..................................................
CT0131682      <-- ..................................................
CT0128782      <-- ..................................................
CT0131685      <-- ..................................................
CT0025430      --> ..................................................
ET0064987      --> ..................................................
ET0066062      --> ..................................................
ET0072912      --> ..................................................
ET0073666      --> ..................................................
ET0080058      --> ..................................................
ET0086678      --> ..................................................
ET0088156      --> ..................................................
ET0089272      --> ..................................................
ET0089971      --> ..................................................
ET0089997      --> ..................................................
ET0091829      --> ..................................................
ET0092244      --> ..................................................
ET0093302      --> ..................................................
ET0094282      --> ..................................................
ET0095374      --> ..................................................
ET0095470      --> ..................................................
ET0096452      --> ..................................................
ET0097793      --> ..................................................
ET0097838      --> ..................................................
ET0101639      --> ..................................................
ET0102078      --> ..................................................
ET0104757      --> ..................................................
ET0105326      --> ..................................................
ET0109179      --> ..................................................
ET0072653      --> ..................................................
ET0100762      --> ..................................................
ET0102423      --> ..................................................
ET0092922      --> ..................................................
ET0098426      --> ..................................................
ET0099691      --> ..................................................
ET0109185      --> ..................................................
ET0070925      --> ..................................................
ET0096416      --> ..................................................
ET0104454      --> ..................................................
ET0107177      --> ..................................................
CT0109563      --> ..................................................
ET0099966      --> ..................................................
CT0007645      --> ..................................................
ET0083509      --> ..................................................
CT0001492      --> ..................................................
CT0015142      --> ..................................................
CT0102374      --> ..................................................
CT0105984      --> ..................................................
ET0119504      --> ..................................................
ET0122395      --> ..................................................
ET0069434      --> ..................................................
CT0013605      --> ..................................................
ET0111614      --> ..................................................
CT0037198      --> ..................................................
ET0051670      --> TTCCACTCTGTACCCTTGAACATCTTGTACAATCGTGCAGAAGAATAACC
ET0056855      --> TTCCACTCTGTACCCTTGAACATCTTGTACAATCGTGCAGAAGAATAA..
ET0084699      --> TTCCACTCTGTACCCTTGAACATCTTGTACAATCGTGCAGAAGAATAA..

               1051   -   1101
RU05427        --> GGCAAATAAGCCCATGAAAA
                   ~~~~~~~~~~~~~~~~~~~~
CT0053088      <-- ....................
ET0111911      <-- ....................
ET0112023      <-- ....................
ET0068478      <-- ....................
ET0071803      <-- ....................
ET0144390      <-- ....................
ET0146878      <-- ....................
ET0147223      <-- ....................
ET0146019      <-- ....................
CT0106589      <-- ....................
ET0005282      <-- ....................
RH43BL6        <-- ....................
RH44BK42       <-- ....................
CT0026459      <-- ....................
CT0119793      <-- ....................
CT0129602      <-- ....................
CT0131682      <-- ....................
CT0128782      <-- ....................
CT0131685      <-- ....................
CT0025430      --> ....................
ET0064987      --> ....................
ET0066062      --> ....................
ET0072912      --> ....................
ET0073666      --> ....................
ET0080058      --> ....................
ET0086678      --> ....................
ET0088156      --> ....................
ET0089272      --> ....................
ET0089971      --> ....................
ET0089997      --> ....................
ET0091829      --> ....................
ET0092244      --> ....................
ET0093302      --> ....................
ET0094282      --> ....................
ET0095374      --> ....................
ET0095470      --> ....................
ET0096452      --> ....................
ET0097793      --> ....................
ET0097838      --> ....................
ET0101639      --> ....................
ET0102078      --> ....................
ET0104757      --> ....................
ET0105326      --> ....................
ET0109179      --> ....................
ET0072653      --> ....................
ET0100762      --> ....................
ET0102423      --> ....................
ET0092922      --> ....................
ET0098426      --> ....................
ET0099691      --> ....................
ET0109185      --> ....................
ET0070925      --> ....................
ET0096416      --> ....................
ET0104454      --> ....................
ET0107177      --> ....................
CT0109563      --> ....................
ET0099966      --> ....................
CT0007645      --> ....................
ET0083509      --> ....................
CT0001492      --> ....................
CT0015142      --> ....................
CT0102374      --> ....................
CT0105984      --> ....................
ET0119504      --> ....................
ET0122395      --> ....................
ET0069434      --> ....................
CT0013605      --> ....................
ET0111614      --> ....................
CT0037198      --> ....................
ET0051670      --> GGCAAATAAGCCCATGAAAA
ET0056855      --> ....................
ET0084699      --> ....................