487 - 537
RU05545 --> AGAGAGAGCGGTTGTGTGTGTTTGCTTCGGACGAGGAGGTAGAGAGATAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- AGAGAGAGCGGTTGTGTGTGTTTGCTTCGGACGAGGAGGTAGAGAGATAT
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
537 - 587
RU05545 --> ATCGGAGGAAAAGTTTGAATCTTCAATCCGGTGATGGTGTGACAGAGTAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ATCGGAGGAAAAGTTTGAATCTTCAATCCGGTGATGGTGTGACAGAGTAA
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
587 - 637
RU05545 --> AAGCCTAATCCTTCAATATATTTGATAGCTGCAAAGTATTCTTTGCCTCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- AAGCCTAATCCTTCAATATATTTGATAGCTGCAAAGTATTCTTTGCCTCC
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
637 - 687
RU05545 --> TCAAGTGGGAAGAAGTTGGGAAAATGAAAATCTCCATCAGAGTGTAGATT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- TCAAGTGGGAAGAAGTTGGGAAAATGAAAATCTCCATCAGAGTGTAGATT
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
687 - 737
RU05545 --> TCCGGGGTTTGACAAAAACCCAGAAATTCAAGCCCCACCAAGGTTGAATT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- TCCGGGGTTTGACAAAAACCCAGAAATTCAAGCCCCACCAAGGTTGAATT
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
737 - 787
RU05545 --> CCTGGATccgcccctgagtccaagtaggattaactggtagttacggaggc
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- CCTGGAT...........................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
787 - 837
RU05545 --> gccacactctgcttcaatggctgccgcagtgacatctcaggcctctctga
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
837 - 887
RU05545 --> aacaaccaaagctgctccctttctcacccaaaaccccgcaaaaccctcgc
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
887 - 937
RU05545 --> cccactttaatctatgtgccctctttcacgaactcaaaactgaaatctgg
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
937 - 987
RU05545 --> tctcAAATTGGGAAATGGGTTCGCTGCAAAAGCTTCAATGGTTGTCAATG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ....AAATTGGGAAATGGGTTCGCTGCAAAAGCTTCAATGGTTGTCAATG
CT0030999 <-- .....................CGCTGCAAAAGCTTCAATGGTTGTCAATG
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
987 - 1037
RU05545 --> AGAGCGATTCGAAGTCTTCAGTTTCTGAAAAGAGGGCCAACAGCCCCATC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- AGAGCGATTCGAAGTCTTCAGTTTCTGAAAAGAGGGCCAACAGCCCCATC
CT0030999 <-- AGAGCGATTCGAAGTCTTCAGTTTCTGAAAAGAGGGCCAACAGCCCCATC
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ......ATTCGAAGTCTTCAGTTTCTGAAAAGAGGGCCAACAGCACCATC
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1037 - 1087
RU05545 --> ATTGTTATTGACAATTATGATAGCTTCACCTACAATCTCTGCCAGTATAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ATTGTTATTGACAATTATGATAGCTTCACCTACAATCTCTGCCAGTATAT
CT0030999 <-- ATTGTTATTGACAATTATGATAGCTTCACCTACAATCTCTGCCAGTATAT
CT0048229 <-- ....TTATTGACAATTATGATAGCTTCACCTACAATCTCTGCCAGTATAT
ET0060297 <-- ........TGACAATTATGATAGCTTCACCTACAATCTCTGCCAGTATAT
ET0057949 <-- .........GACAATTATGATAGCTTCACCTACAATCTCTGCCAGTATAT
CT0138343 <-- ...................gTAGCTTCACCTACAATCTCTGCCAGTATAT
ET0121491 <-- ......................................CTGCCAGTATAT
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ATTGTTATTGACAATTATGATAGCTTCACCTACAATCTCTGCCAGTATAT
ET0006971 --> ...GTTATTGACAATTATGATAGCTTCACCTACAATCTCTGCCAGTATAT
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1087 - 1137
RU05545 --> GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
CT0030999 <-- GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
CT0048229 <-- GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
ET0060297 <-- GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
ET0057949 <-- GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
CT0138343 <-- GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
ET0121491 <-- GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
CT0097356 <-- ...........................................TTAACAG
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
ET0006971 --> GGGAGAGCTTGGATGTCACTTTGAAGTTTATCGCAATGATGAATTAACAG
CT0079196 --> ......................................ATGAATTAACAG
CT0080742 --> ......................................ATGAATTAACAG
ET0077524 --> .........................................AATTAACAG
ET0078826 --> .........................................AATTAACAG
ET0105637 --> .........................................AATTAACAG
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1137 - 1187
RU05545 --> TGGATGAA-CTAAAAA-GGAAAAA-TCCTAGAGGAGTCTTGATCTCCCCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- TGGATGAA-CTAAAAAAGGAAAAA-TCCTAGAGGAGTact..........
CT0030999 <-- TGGATGAA-CTA......................................
CT0048229 <-- TGGATGAA-CT.......................................
ET0060297 <-- TGGATGAA-CT.......................................
ET0057949 <-- Taggaatagaaact....................................
CT0138343 <-- TGGATGAA-CTAAAAA-GGAAAAA-TCCTAGAGGAGTCTTGATCTCCCCA
ET0121491 <-- TGGATGAA-CTAAAAA-GGAAAAA-TCCTAGAGGAGTCTTGATCTCCCCA
CT0097356 <-- TGGATGAA-CTAAAAA-GGAAAAAATCCTAGAGGAGTCTTGATCTCCCCA
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> TGGATGAA-CTAAAAA-GGAAAAA-TCCTAGAGGAGTCTTGATCTCCCCA
ET0006971 --> TGGATGAA-CTAAAAA-GGAAAAA-TCCTAGAGGAGTCTTGATCTCCCCA
CT0079196 --> TGGATGAA-CTAAAAA-GGAAAAA-TCCTAGAGGAGTCTTGATCTCCCCA
CT0080742 --> TGGATGAA-CTAAAAA-GGAAAAA-TCCTAGAGGAGTCTTGATCTCCCCA
ET0077524 --> TGGATGAA-CTAAAAAAGGAAAAA-TCCTAGAGGAGTCTTGATCTCCCCA
ET0078826 --> TGGATGAA-CTAAAAAAGGAAAAAATCCTAGAGGAGTCTTGATCTCCCCA
ET0105637 --> TGGATGAAACTAAAAAAGGAAAAAATCCTAGAGGAGTCTTGATCTCCCCA
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1187 - 1237
RU05545 --> GGG-CCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- GGG-CCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
ET0121491 <-- GGG-CCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
CT0097356 <-- GGGGCCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
ET0019727 <-- ......................TCTGGAATATCATTGCAAACTGTGTTGG
ET0022368 <-- ......................TCTGGAATATCATTGCAAACTGTGTTGG
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> GGG-CCAGGG........................................
ET0006971 --> GGG-CCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
CT0079196 --> GGG-CCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
CT0080742 --> GGG-CCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
ET0077524 --> GGG-CCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
ET0078826 --> GGG-CCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
ET0105637 --> GGG-CCAGGGGCACCCCAAGATTCTGGAATATCATTGCAAACTGTGTTGG
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1237 - 1287
RU05545 --> AGTTAGGACCCATTGTCCCCTTGTTTGGTGTGTGTATGGGTCTGCAGTGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- AGTTAGGACCCATTGTCCCCTTGTTTGGTGTGT.................
ET0121491 <-- AGTTAGGACCCATTGTCCCCTTGTTTGGTGTGTGTATGGGTCTGCAGTGC
CT0097356 <-- AGTTAGGACCCATTGTCCCCTTGTTTGGTGTGTGTATGGGTCTGCAGTGC
ET0019727 <-- AGTTAGGAACCATTGTCCCCTTATTTGGTGTGTGTATGGGTCTGCAGTGC
ET0022368 <-- AGTTAGGAACCATTGTCCCCTTATTTGGTGTGTGTATGGGTCTGCAGTGC
CT0020048 <-- ...........................................GCAGTGC
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> AGTTAGGACCCATTGTCCCCTTG...........................
CT0079196 --> AGTTAGGACCCATTGTCCCCTTG...........................
CT0080742 --> AGTTAGGACCCATTGTCCCCTTG...........................
ET0077524 --> AGTTAGGACCCATTGTCCCCTTGTTTGGTGTGTGTATGGGTCTGCAGTGC
ET0078826 --> AGTTAGGACCCATTGTCCCCTTGTTTGGTGTGTGTATGGGTCTGCAGTGC
ET0105637 --> AGTTAGGACCCATTGTCCCCTTGTTTGGTGTGTGTATGGGTCTGCAGTGC
ET0089737 --> .........................................CTGCAGTGC
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1287 - 1337
RU05545 --> ATTGGGGAGG-CTTTTGG--AGGG-AATGTTGTTCGTTCTCCTTATGGTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- .................................................. Control
ET0140039 <-- .................................................. Ethylene
CT0030999 <-- .................................................. Control
CT0048229 <-- .................................................. Control
ET0060297 <-- .................................................. Ethylene
ET0057949 <-- .................................................. Ethylene
CT0138343 <-- .................................................. Control
ET0121491 <-- ATTGGGGAGG-CTTTTGG--AGGG-AATGTTGTTCGTTCTCCTTATGGT. Ethylene
CT0097356 <-- ATTGGGGAGGGCTTTTGGTTAGGGTAATGTTGTTCGTTCTCCTTATGGTG Control
ET0019727 <-- ATTGGGGAGG-CTTTTGG--AGGG-AATGTTGTTCGTTCTCCTTATGGTG Ethylene
ET0022368 <-- ATTGGGGAGG-CTTTTGG--AGGG-AATGTTGTTCGTTCTCCTTATGGTG Ethylene
CT0020048 <-- ATTGGGGAGGGCTTTTGG--AGGG-AATGTTGTTCGTTCTCCTTATGGTG Control
ET0098803 <-- .................................................. Ethylene
CT0021598 <-- .................................................. Control
ET0059604 <-- .................................................. Ethylene
ET0021671 <-- .................................................. Ethylene
ET0088724 <-- .................................................. Ethylene
CT0017815 --> .................................................. Control
ET0006971 --> .................................................. Ethylene
CT0079196 --> .................................................. Control
CT0080742 --> .................................................. Control
ET0077524 --> ATTGGGGAGG-CTTTTGG--AGGG-AATGTTGTTCGTTCTCCTTATGGTG Ethylene
ET0078826 --> ATTGGGGAGG-CTTTTGG--AGGG-AATGTTGTTCGTTCTCCTTATGGTG Ethylene
ET0105637 --> ATTGGGGAGG-CTTTTGG--AGGG-AATGTTGTTCGTTCTCCTTATGGTG Ethylene
ET0089737 --> ATTGGGGAGG-CTTTTGG--AGGG-AATGTTGTTCGTTCTCCTTATGGTG Ethylene
CT0088702 --> .................................................. Control
ET0121589 --> .................................................. Ethylene
ET0032569 --> .................................................. Ethylene
ET0127093 --> .................................................. Ethylene
ET0053262 --> .................................................. Ethylene
1337 - 1387
RU05545 --> TTGTGCA-TGGGAAGAGCTCTCCCGTGTATTATAATGAGAAGGAGGAAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- TTGTGCA-Taagggaaaaagaaaa..........................
ET0019727 <-- TCGTGCA-TGGGAAGAGCTCTCCCGTGTAa....................
ET0022368 <-- TCGTGCA-TGGGAAGAGCTCTCCCGTGTA.....................
CT0020048 <-- TTGTGCA-TGGGAAGAGCTCTCCCGTGTATTATAATGAGAAGGAGGAAGA
ET0098803 <-- ...............AGCTCTCCCGTGTATTATAATGAGAAGGAGGAAGA
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> TTGTGCA-TGGGAAGAGCTCTCC...........................
ET0078826 --> TTGTGCA-TGGGAAGAGCTCTCCCGTGTATTATA................
ET0105637 --> TTGTGCAGTGGGAAGAGCTCTCC-GTGTAT....................
ET0089737 --> TTGTGCA-TGGGAAGAGCTCTCCCGTGTATTATAATGAGAAGGAGGAAGA
CT0088702 --> .cGTGCA-TGGGAAGAGCTCTCCCGTGTATTATAATGAGAAGGAGGAAGA
ET0121589 --> ................GCTCTCCCGTGTATTATAATGAGAAGGAGGAAGA
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1387 - 1437
RU05545 --> CAGCTTGTTTGCTGGACTATCAAACCCTTTCACTGCTGGCAGATATCACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- CAGCTTGTTTGCTGGACTATCAAACCCTTTCACTGCTGGCAGATATCACA
ET0098803 <-- CAGCTTGTTTGCTGGACTATCAAACCCTTTCACTGCTGGCAGATATCACA
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> CAGCTTGTTTGCTGGACTATCAAACCCTTTCACTGCTGGCAGATATCACA
CT0088702 --> CAGCTTGTTTGCTGGACTATCAAACCCTTTCACTGCTGGCAGATATCACA
ET0121589 --> CAGCTTGTTTGCTGGACTATCAAACCCTTTCACTGCTGGCAGATATCACA
ET0032569 --> ...tcgagcgtCTGGACTATCAAACCCTTTCACTGCTGGCAGATATCACA
ET0127093 --> ................................................CA
ET0053262 --> ..................................................
1437 - 1487
RU05545 --> GTCTTGTAATTGAAAAGGACAGTTTTCCTAGCGAAGAACTTGAAATTACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- GTCTTGTAATTGAAAAGGACAGTTTTCCTAG...................
ET0098803 <-- GTCTTGTAATTGAAAAGGACAGTTTTCCTAGCGAAGAACTTGAAATTACA
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> GTCTTGTAATTGAAAAGGACAGTTTTCCTA....................
CT0088702 --> GTCTTGTAATTGAAAAGGACAGTTTTCCTAGTGAAGTACTTGAGATTACA
ET0121589 --> GTCTTGTAATTGAAAAGGACAGTTTTCCTAGCGAAGAACTTGAAATTACA
ET0032569 --> GTCTTGTAATTGAAAAGGACAGTTTTCCTAGCGAAGAACTTGAAATTACA
ET0127093 --> GTCTTGTAATTGAAAAGGACAGTTTTCCTAGCGAAGAACTTGAAATTACA
ET0053262 --> .TCTTGTAATTGAAAAGGACAGTTT-CCTAGCGAAGAACTTGAAATTACA
1487 - 1537
RU05545 --> GCATGGACCGAGGATGGACTGATAATGGCTGCTCGTCACAAGAAATATAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- GCATGGACCGAGGATGGACTGATAATGGCTGCTCGTCACAAGAAATATAG
CT0021598 <-- ..................................................
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> GCATGGACCGAGGATGGACTGATAATGGCTGCTCGTCA............
ET0121589 --> GCATGGACCGAGGATGGACTGATAATGGCTGCTCGTCACAAGAAATATAG
ET0032569 --> GCATGGACCGAGGATGGACTGATAATGGCTGCTCGTCACAAGAAATATAG
ET0127093 --> GCATGGACCGAGGATGGACTGATAATGGCTGCTCGTCACAAGAAATATAG
ET0053262 --> GCATGGACCGAGGATGGACTGATAATGGCTGCTCGTCACAAGAAATATAG
1537 - 1587
RU05545 --> GTATCTTCAGGGTGTCCAGTTCCATCCTGAAAGTATCATCACTTCCGAAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- GTATCTTCAGGGTGTCCAGTTCCATCCTGAAAGTATCATCACTTCCGAAG
CT0021598 <-- ........................................ACTTCCGAAG
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> GTATCTTCAGGGTGTCCAGTTCCATCCTGAAAGTATCATCACTTCCGAAG
ET0032569 --> GTATCTTCAGGGTGTCCAGTTCCATCCTGAAAGTATCATCACTTCCGAAG
ET0127093 --> GTATCTTCAGGGTGTCCAGTTCCATCCTGAAAGTATCATCACTTCCGAAG
ET0053262 --> GTATCTTCAGGGTGTCCAGTTCCATCCTGAAAGTATCATCACTTCCGAAG
1587 - 1637
RU05545 --> GCAGGACAATCGTTCGCAACTTTGTAAAACTGATCGAGAAAAGTGAGTCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- G.................................................
CT0021598 <-- GCAGGACAATCGTTCGCAACTTTGTAAAACTGATCGAGAAAAGTGAGTCG
ET0059604 <-- ..................................................
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> GCAGGACAATCGTTCGCAACTTTag.........................
ET0127093 --> GCAGGACAATCGTTCGCAACTTTGTAAAACT...................
ET0053262 --> GCAGGACAATCGTTCGCAACTTTGTAAAACTGATCGAGAAAAGTGAGTCG
1637 - 1687
RU05545 --> GAATCTGAGAATAACTAG-AGGTTT-GGTTTGTCTACACAGTGTAATGTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- GAATCTGAGAATAACTAG-AGGTTT-GGTTTGTCTACACAGTGTAATGTA
ET0059604 <-- .........AATGACTAG-AGGTTT-GGTTTGTCTACACAGTGTAATGTA
ET0021671 <-- ..................................................
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> GAATCTGAGAATAACTAGTAGGTTTTGGTTTGTCTACACAGTGTAATGT.
1687 - 1737
RU05545 --> ATGTATCGGATCAATATATATTTATGGGCCTTTAAGTCAGCTCGCTAGTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ATGTATCGGATCAATATATATTTATGGGCCTTTAAGTCAGCTCGCTAGTG
ET0059604 <-- ATGTATCGGATCAATATATATTTATGGGCCTTTAAGTCAGCTCGCTAGTG
ET0021671 <-- ................TATATTTATGGGCCTTTAAGTCAGCTCGCTAGTG
ET0088724 <-- ..................................................
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1737 - 1787
RU05545 --> AATCAGAAGTTGATCATGTTTCTCGTCTACTCTTTCAATGTACTTCATCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- AATCAGAAGTTGAT....................................
ET0059604 <-- AATCAGAAGTTGATCATGTTTCTCGTCTACTCTTTCAATGTACTTCATCA
ET0021671 <-- AATCAGAAGTTGATCATGTTTCTCGTCTACTCTTTCAATGTACTTCATCA
ET0088724 <-- ............ATCATGTTTCTCGTCTACTCTTTCAATGTACTTCATCA
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1787 - 1837
RU05545 --> CATGTAGACATGTAGTATTTCAACTCTATTATAGTATTATCAATCCTTCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- ..................................................
ET0140039 <-- ..................................................
CT0030999 <-- ..................................................
CT0048229 <-- ..................................................
ET0060297 <-- ..................................................
ET0057949 <-- ..................................................
CT0138343 <-- ..................................................
ET0121491 <-- ..................................................
CT0097356 <-- ..................................................
ET0019727 <-- ..................................................
ET0022368 <-- ..................................................
CT0020048 <-- ..................................................
ET0098803 <-- ..................................................
CT0021598 <-- ..................................................
ET0059604 <-- CATGTAGACATGTAGTATTTCAACTCTATTATAGTATTATCAATCCTTCC
ET0021671 <-- CATGTAGACATGTAGTATTTCAACTCTATTATAGTATTATCAATCCTTCC
ET0088724 <-- CATGTAGACATGTAGTATTTCAACTCTATTATAGT...............
CT0017815 --> ..................................................
ET0006971 --> ..................................................
CT0079196 --> ..................................................
CT0080742 --> ..................................................
ET0077524 --> ..................................................
ET0078826 --> ..................................................
ET0105637 --> ..................................................
ET0089737 --> ..................................................
CT0088702 --> ..................................................
ET0121589 --> ..................................................
ET0032569 --> ..................................................
ET0127093 --> ..................................................
ET0053262 --> ..................................................
1837 - 1887
RU05545 --> ATAACTTCCTGAAGATAAAAAAAAA
~~~~~~~~~~~~~~~~~~~~~~~~~
CT0033529 <-- .........................
ET0140039 <-- .........................
CT0030999 <-- .........................
CT0048229 <-- .........................
ET0060297 <-- .........................
ET0057949 <-- .........................
CT0138343 <-- .........................
ET0121491 <-- .........................
CT0097356 <-- .........................
ET0019727 <-- .........................
ET0022368 <-- .........................
CT0020048 <-- .........................
ET0098803 <-- .........................
CT0021598 <-- .........................
ET0059604 <-- ATAACTTCCT...............
ET0021671 <-- ATAACTTCCTGAAGATAAAAAAAAA
ET0088724 <-- .........................
CT0017815 --> .........................
ET0006971 --> .........................
CT0079196 --> .........................
CT0080742 --> .........................
ET0077524 --> .........................
ET0078826 --> .........................
ET0105637 --> .........................
ET0089737 --> .........................
CT0088702 --> .........................
ET0121589 --> .........................
ET0032569 --> .........................
ET0127093 --> .........................
ET0053262 --> .........................
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