1 - 51
RU05559 --> TGTCGAGCGTCTTTTTTTGTATCCACTAAAA-TTTCTGGCTGCTTT-ATT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- ..................................................
CT0076012 <-- ..................................................
ET0144487 <-- ..................................................
ET0032844 --> TGTCGAGCGTCTTTTTTTTTATCCACTAAAAATTTCTGGCTGCTTT-ATT
CT0039528 --> .........ttTTTTTTTGTATCCACTAAAAATTTCTGGCTGCTTT-ATT
CT0104846 --> ..................GTATCCACTAAAA-TTTCTGGCTGCTTT-ATT
ET0137113 --> ......................CCACTAAAAATTTCTGGCTGCTTTTATT
CT0035042 --> ..................................................
CT0061227 --> ..................................................
CT0099664 --> ..................................................
CT0099590 --> ..................................................
51 - 101
RU05559 --> TT-ATATATTGCTATGGCAAAAGAACCACAATGACATTATAGAAAGTTAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- ..................................................
CT0076012 <-- ..................................................
ET0144487 <-- ..................................................
ET0032844 --> TT-ATATATTGCTATGGCAAAAGAACCACAATGACATTATAGAAAGTTAT
CT0039528 --> TT-ATATATTGCTATGGCAAAAGAACCACAATGACATTATAGAAAGTTAT
CT0104846 --> TT-ATATATTGCTATGGCAAAAGAACCACAATGACATTATAGAAAGTTAT
ET0137113 --> TTTATATATTGCTATGGCAAAAGAACCACAATGACATTATAGAAAGTTAT
CT0035042 --> .............ATGGCAAAAGAACCACAATGACATTATAGAAAGTTAT
CT0061227 --> .............ATGGCAAAAGAACCACAATGACATTATAGAAAGTTAT
CT0099664 --> ..................................................
CT0099590 --> ..................................................
101 - 151
RU05559 --> TGGATACATGCTCAAATAGAAAAGCAATGTGATAAAATGTGTAGCTTGAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- ..................................................
CT0076012 <-- ..................................................
ET0144487 <-- ..................................................
ET0032844 --> TGGATACATGCTCAAATAGAAAAGCAATGTGATAAAATGTGTAGCTTGAC
CT0039528 --> TGGATACATGCTCAAATAGAAAAGCAATGTGATAAAATGTGTAGCTTGAC
CT0104846 --> TGGATACATGCTCAAATAGAAAAGCAATGTGATAAAATGTGTAGCTTGAC
ET0137113 --> TGGATACATGCTCAAATAGAAAAGCAATGTGATAAAATGTGTAGCTTGAC
CT0035042 --> TGGATACATGCTCAAATAGAAAAGCAATGTGATAAAATGTGTAGCTTGAC
CT0061227 --> TGGATACATGCTCAAATAGAAAAGCAATGTGATAAAATGTGTAGCTTGAC
CT0099664 --> ..................................................
CT0099590 --> ..................................................
151 - 201
RU05559 --> CAAAAGAATGGGTACATACAAC---TATGATTATATTCTCCTCTGAGGAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- .......................................CCTCTGAGGAT Control
CT0076012 <-- .......................................CCTCTGAGGAT Control
ET0144487 <-- .................................................. Ethylene
ET0032844 --> CAAAAGAATGGGTACATACAACAACTATGATTATATTCTCCTCTGAGGAT Ethylene
CT0039528 --> CAAAAGAATGGGTACATACAAC---TATGATT.................. Control
CT0104846 --> CAAAAGAATGGGTACATACAAC---TATGATTATATTCTCCTCTGAGGAT Control
ET0137113 --> CAAAAGAATGGGTACATACAACAACTATGATTATATTCTCCTCTGAGGAT Ethylene
CT0035042 --> CAAAAGAATGGGTACATACAAC---TATGATT.................. Control
CT0061227 --> CAAAAGAATGGGTACATACAAC---TATGATT.................. Control
CT0099664 --> .................................................. Control
CT0099590 --> .................................................. Control
201 - 251
RU05559 --> GACTGATCATTCCTTTTTATAAACTAGTGTGGGGTATTCTGGAC-TCCAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- GACTGATCATTCCTTTTTATAAACTAGTGTGGGGTATTCTGGAC-TCCAC
CT0076012 <-- GACTGATCAT-CCTTTTTATAAACTAGTGTGGGGTATTCTGGAC-TCCAC
ET0144487 <-- ..................................................
ET0032844 --> GACTGATCATTCCTTTT-ATAAACTAGTGTGGGGTATTCTGGAC-TCCA.
CT0039528 --> ..................................................
CT0104846 --> GACTGATCATTCCTTTTTATAAACTAGTGTGGGGTATTCTGGAC-TCCAC
ET0137113 --> GACTGATCATTCCTTTTTATAAACTAGTGTGGGGTATTCTGGACCTCCAC
CT0035042 --> ..................................................
CT0061227 --> ..................................................
CT0099664 --> ..................................................
CT0099590 --> ..................................................
251 - 301
RU05559 --> ATGTTGTTCTGCACATATTCTTCAATTTCTTCCTGATTGAGTTTCTGGAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- ATGTTGTTCTGCACATATTCTTCAATTTCTTCCTGATTGAGTTTCTGGAG
CT0076012 <-- ATGTTGTTCTGCACATATTCTTCAATTTCTTCCTGATTGAGTTTCTGGAG
ET0144487 <-- ATGTTGTTCTGCACATATTCTTCAATTTCTTCCTGATTGAGTTTCTGGAG
ET0032844 --> ..................................................
CT0039528 --> ..................................................
CT0104846 --> ATGTTGTT..........................................
ET0137113 --> A.................................................
CT0035042 --> ..................................................
CT0061227 --> ..................................................
CT0099664 --> .........................TTTCTTCCTGATTGAGTTTCTGGAG
CT0099590 --> ..................................................
301 - 351
RU05559 --> CTCTCGGGCATCCATTTCACGGTACCCTTCTGCTAGATCCTCATCTAGGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- CTCTCGGGCATCCATTTCACGGTACCC.......................
CT0076012 <-- CTCTCGGGCATCCATT-CACGGTAaccc......................
ET0144487 <-- CTCTCGGGCATCCATTTCACGGTACCCTTCTGCTAGATCCTCATCTAGGG
ET0032844 --> ..................................................
CT0039528 --> ..................................................
CT0104846 --> ..................................................
ET0137113 --> ..................................................
CT0035042 --> ..................................................
CT0061227 --> ..................................................
CT0099664 --> CTCTCGGGCATCCATTTCACGGTACCCTTCTGCTAGATCCTCATCTAGGG
CT0099590 --> ..................................................
351 - 401
RU05559 --> CTTCTTTTATTACAGCCACAGCCACCTTCTTTGTTATATCTCGTATGCTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- ..................................................
CT0076012 <-- ..................................................
ET0144487 <-- CTTCTTTTATTACAGCCACAGCCACCTTCTTTGTTATATCTCGTATGCTA
ET0032844 --> ..................................................
CT0039528 --> ..................................................
CT0104846 --> ..................................................
ET0137113 --> ..................................................
CT0035042 --> ..................................................
CT0061227 --> ..................................................
CT0099664 --> CTTCTTTTATTACAGCCACAGCCACCTTCTTTGTTATATCTCGTATGCTA
CT0099590 --> ..................................................
401 - 451
RU05559 --> GATATTGAAGGGTATATAACCCCTTTTAGAACCTCCTCATCTGTCATATA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- ..................................................
CT0076012 <-- ..................................................
ET0144487 <-- GATATTGAAGGGTATATAACCCCTTTTAGAACCTCCTCATCTGTCATATA
ET0032844 --> ..................................................
CT0039528 --> ..................................................
CT0104846 --> ..................................................
ET0137113 --> ..................................................
CT0035042 --> ..................................................
CT0061227 --> ..................................................
CT0099664 --> GATATTGAAGGGTATATAACCCCTTTTAGAACCTCCTCATCTGTCATATA
CT0099590 --> .................................cttcatTCTGTCATATA
451 - 501
RU05559 --> TGCAGCTAGGCACTCTGCTGCCACCTGTAGCATCCCATCGGAGATAACTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- ..................................................
CT0076012 <-- ..................................................
ET0144487 <-- TGCAGCTAGGCACTCTGCTGCCACC.........................
ET0032844 --> ..................................................
CT0039528 --> ..................................................
CT0104846 --> ..................................................
ET0137113 --> ..................................................
CT0035042 --> ..................................................
CT0061227 --> ..................................................
CT0099664 --> TGCAGCTAGGCA......................................
CT0099590 --> TGCAGCTAGGCACTCTGCTGCCACCTGTAGCATCCCATCGGAGATAACTC
501 - 551
RU05559 --> TGGAACCAGATAAGAGAGTACCAAGTCCAATACCTGGGAAAAGGTACATG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0007570 <-- ..................................................
CT0076012 <-- ..................................................
ET0144487 <-- ..................................................
ET0032844 --> ..................................................
CT0039528 --> ..................................................
CT0104846 --> ..................................................
ET0137113 --> ..................................................
CT0035042 --> ..................................................
CT0061227 --> ..................................................
CT0099664 --> ..................................................
CT0099590 --> TGGAACCAGATAAGAGAGTACCAAGTCCAATACCTGGGAAAAGGTACATG
551 - 601
RU05559 --> TTGTTACCCTGGTTG
~~~~~~~~~~~~~~~
CT0007570 <-- ...............
CT0076012 <-- ...............
ET0144487 <-- ...............
ET0032844 --> ...............
CT0039528 --> ...............
CT0104846 --> ...............
ET0137113 --> ...............
CT0035042 --> ...............
CT0061227 --> ...............
CT0099664 --> ...............
CT0099590 --> TTGTTACCCTGGTTG
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