SNPs of unigene RU05580
               1      -     51
RU05580        --> ACATTTTTCAGTATTTCCTCTTCAGACCTGGTTTCAAAGTGGATGGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ACATTTTTCAGTATTTCCTCTTCAGACCTGGTTTCAAAGTGGATGGGTGA
ET0125177      --> ACATTTTTCAGTATTTCCTCTTCAGACCTGGTTTCAAAGTGGATGGGTGA
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               51     -    101
RU05580        --> GAGTGAGAAGCTAGTTTCAAACCTTTTCCAAA-TGGCTCGAGATAGTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ......GAAGCTAGTTTCAAACCTTTTCCAAAATGGCTCGAGATAGTGCC
CT0118772      <-- ..........CTAGTTTCAAACCTTTTCCAAA-TGGCTCGAGATAGTGCC
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> GAGTGAGAAGCTAGTTTCAAACCTTTTCCAAA-TGGCTCGAGATAGTGCC
ET0125177      --> GAGTGAGAAGCTAGTTTCAAACCTTTTCCAAA-TGGCTCGAGATAGTGCC
CT0063595      --> ....................ACCTTTTCCAAA-TGGCTCGAGATAGTGCC
ET0033425      --> ......................CTTTTCCAAA-TGGCTCGAGATAGTGCC
CT0065136      --> ...................acctTTTTCCAAA-TGGCTCGAGATAGTGCC
ET0011291      --> ...................................GCTCGAGATAGTGCC
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               101    -    151
RU05580        --> CCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGACGCGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- CCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGACGCGTGG
CT0118772      <-- CCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGACGCGTGG
CT0096035      <-- ..........................................ACGCGTGG
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> CCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGACGCGTGG
ET0125177      --> CCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGACGCGTGG
CT0063595      --> CCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGACG.....
ET0033425      --> CCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGACGCGTGG
CT0065136      --> CCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGACGCGTGG
ET0011291      --> CCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGACGCGTGG
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               151    -    201
RU05580        --> AGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- AGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAG.............
CT0118772      <-- AGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTG
CT0096035      <-- AGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTG
CT0122327      <-- .............AGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTG
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> AGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTG
ET0125177      --> AGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTG
CT0063595      --> ..................................................
ET0033425      --> AGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTG
CT0065136      --> AGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTG
ET0011291      --> AGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTTTTG
CT0053816      --> .GAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTG
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               201    -    251
RU05580        --> TGCAGATGCAGGGTGTGGGAACCAATGACCAAAAAGTTCTTGTTCTTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- TGCAGATGCAGGGTGTGGGAACCAATGACCAAAAAGTTCTTGTTCTTGCA
CT0096035      <-- TGCAGATGCAGGGTGTGGGAACCAATGACCAAAAAGTTCTTGTTCTTGCA
CT0122327      <-- TGCAGATGCAGGGTGTGGGAACCAATGACCAAAAAGTTCTTGTTCTTGCA
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> TGCAGATGCAGGGTGTGGGAACCAATGACCAAAAAGTTCTTGTT......
ET0125177      --> TGCAGATGCAGGGTGTGGGAACCAATGACCAAAAAGTTCTTGTT......
CT0063595      --> ..................................................
ET0033425      --> TGCAGATGCAGGGTGTGGGAACCAATGACCAAAAAGTTCTTGTTCTTGCA
CT0065136      --> TGCAGATGCAGGGTGT..................................
ET0011291      --> gtcattggttcccacaccctgcatctg.......................
CT0053816      --> TGCAGATGCAGGGTGTGGGAACCAATGACCAAAAAGTTCTTGTTCTTGCA
ET0138214      --> ...............................AAAAGTTCTTGTTCTTGCA
CT0135660      --> ........................................TGTTCTTGCA
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               251    -    301
RU05580        --> GCGACAAATACTCCCTATGCATTAGACCAGGCCATTCGAAGACGTTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- GCGACAAATACTCCCTATGCATTAGACCAGGCCATTCGAAGACGTTTT..
CT0096035      <-- GCGACAAATACTCCCTATGCATTAGACCAGGCCATcaagcaga.......
CT0122327      <-- GCGACAAATACTCCCTATGCATTAGACCAGGCCATTCGAAGACGTTTT..
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> GCGACAAATACTCCCTATGCATTAGACCAGGCCATTCGAAGACGTTTTGA
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> GCGACAAATACTCCCTATGCATTAGACCAGGCCATcaagcag........
ET0138214      --> GCGACAAATACTCCCTATGCATTAGACCAGGCCATTCGAAGACGTTTTGA
CT0135660      --> GCGACAAATACTCCCTATGCATTAGACCAGGCCATTCGAAGACGTTTTGA
CT0129972      --> .CGACAAATACTCCCTATGCATTAGACCAGGCCATTCGAAGACGTTTTGA
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               301    -    351
RU05580        --> CAAGCGTATTTACATTCCCCTTCCAGATGCAAAGGCTCGACAGCATATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> CAAGCGTt..........................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> CAAGCGTATTTACATTCCCCTTCCAGATGCAAAGGCTCGACAGCATATAT
CT0135660      --> CAAGCGTATTTACATTCCCCTTCCAGATGCAAAGGCTCGACAGCATATAT
CT0129972      --> CAAGCGTATTTACATTCCCCTTCCAGATGCAAAGGCTCGACAGCATATAT
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               351    -    401
RU05580        --> TCAAAGTCCACTTGGGAGATACTCCTCACAACTTGACAGAAAGTGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> TCAAAGTCCACTTGGGAGATACTCCTCACAACTTGACAGAAAGTGATTTT
CT0135660      --> TCAAAGTCCACTTGGGAGATACTCCTCACAACTTGACAGAAAGTGATTTT
CT0129972      --> TCAAAGTCCACTTGGGAGATACTCCTCACAACTTGACAGAAAGTGATTTT
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               401    -    451
RU05580        --> GAAAGCTTAGGTTTGAAAACTGAGGGATTTTCGGGTTCAGATATTTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> GAAAGCTTAGGTTTGAAAACTGAGGGATTTTCGGGTTCAGATATTTCTGT
CT0135660      --> GAAAGCTTAGGTTTGAAAACTGAGGGATTTTCGGGTTCAGATATTTTTGT
CT0129972      --> GAAAGCTTAGGTTTGAAAACTGAGGGATTTTCGGGTTCAGATATTTTTGT
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               451    -    501
RU05580        --> TTGTGTCAAGGATGTTCTTTTTG-AACCTGTACGCAAAACACAAGATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- .............tgTCTTTTTGTAACCTGTACGCAAAACACAAGATGCC
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> TTGTGTCAAGGATGTTCTTTT-G-AACCTGTACGCAAAACA.........
CT0135660      --> TTGTGTCAAGGATGTTCTTTTTG-AACCTGTACGCAAAACACAAGATGCC
CT0129972      --> TTGTGTCAAGGATGTTCTTTTTG-AACCTGTACGCAAAACACAAGATGCC
ET0121319      --> ..........................CCTGTACGCAAAACACAAGATGCC
CT0133838      --> .................................GCAAAACACAAGATGCC
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               501    -    551
RU05580        --> ATGTTCTTTTTC-AAGAATTCTGATAATATGTTCATACCTTGTGGACCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ATGTTCTTTTTCTAAGAATTCTGATAATATGTTCATACCTTGTGGACCAA
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ATGTTCTTTTTC-AAGAATTCTGATAATATGTTCATACCTTGTGGACCAA
CT0129972      --> ATGTTCTTTTTC-AAGAATTCTGATAATATGTTCATACCTTGTGGACCAA
ET0121319      --> ATGTTCTTTTTC-AAGAATTCTGATAATATGTTCATACCTTGTGGACCAA
CT0133838      --> ATGTTCTTTTTC-AAGAATTCTGATAATATGTTCATACCTTGTGGACCAA
ET0086751      --> ................................................AA
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               551    -    601
RU05580        --> A-GCAACCGGGTGCTGTCCAAATCACCATGCAGG-GTTGGCAGCTCAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................  Control
CT0118772      <-- ..................................................  Control
CT0096035      <-- ..................................................  Control
CT0122327      <-- ..................................................  Control
CT0045552      <-- AAGCAACCGGGTGCTGTCCAAATCACCATGCAGGAGTTAGCAGCTCAAGG  Control
CT0083962      <-- ..................................................  Control
CT0088762      <-- ..................................................  Control
CT0087325      <-- ..................................................  Control
ET0057364      <-- ..................................................  Ethylene
CT0110705      <-- ..................................................  Control
CT0019756      <-- ..................................................  Control
CT0031676      <-- ..................................................  Control
ET0006121      <-- ..................................................  Ethylene
CT0030749      <-- ..................................................  Control
ET0123441      --> ..................................................  Ethylene
ET0125177      --> ..................................................  Ethylene
CT0063595      --> ..................................................  Control
ET0033425      --> ..................................................  Ethylene
CT0065136      --> ..................................................  Control
ET0011291      --> ..................................................  Ethylene
CT0053816      --> ..................................................  Control
ET0138214      --> ..................................................  Ethylene
CT0135660      --> A-GCAACCGGGT......................................  Control
CT0129972      --> A-GCAACCGGGT......................................  Control
ET0121319      --> A-GCAACCGGGTGCGGTCCAAATCACCATGCAGG-GTTGGCAGCTCAAGG  Ethylene
CT0133838      --> A-GCAACCGGGTGCTGTCCAAATCACCATGCAGGAGTTAGCAGCTCAAGG  Control
ET0086751      --> A-GCAACCGGGTGCTGTCCAAATCACCATGCAGGAGTTGGCAGCTCAAGG  Ethylene
CT0062950      --> ...........................................CTCAAGG  Control
ET0127305      --> ..................................................  Ethylene
ET0056157      --> ..................................................  Ethylene
CT0067628      --> ..................................................  Control
CT0070463      --> ..................................................  Control
CT0072115      --> ..................................................  Control
CT0077079      --> ..................................................  Control
ET0142306      --> ..................................................  Ethylene
ET0011128      --> ..................................................  Ethylene
ET0012610      --> ..................................................  Ethylene

               601    -    651
RU05580        --> ACTAGCTTCACAGATCCTTCCACCTCCCATCACAAAAACAGATTTTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ACTAGCTTCACAGATCCTTCCACCTCCCATCACAAAAACAGATTTTGATA
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ACTAGCTTCACAGATCCTTCCACCTCCCATCACAAAAACAGATTTTGATA
CT0133838      --> ACTAGCTTCACAGATCCTTCCACCTCCCATCACAAAAACAGATTTTGATA
ET0086751      --> ACTAGCTTCACAGATCCTTCCACCTCCCATCACAAAAACAGATTTTGATA
CT0062950      --> ACTAGCTTCACAGATCCTTCCACCTCCCATCACAAAAACAGATTTTGATA
ET0127305      --> .......................................AGATTTTGATA
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               651    -    701
RU05580        --> AGGTACTTGCTAGACAGAGGCCTACTGTGAGCAAAGGGGACCTTGAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- AGGTACTTGCTAGACAGAGGCCTACTGTGAGCAAAGGGGACCTTGAAGTC
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> AGGTACTTGCTAGACAGAGGCCTACTGTGAGCAAAGGGGACCTTGAAGTC
CT0133838      --> AGGTACTTGCTAGACAGAGGCCTACTGTGAGCAAAGGGGACCTTGAAGTC
ET0086751      --> AGGTACTTGCTAGACAGAGGCCTACTGTGAGCAAAGGGGACCTTGAAGTC
CT0062950      --> AGGTACTTGCTAGACAGAGGCCTACTGTGAGCAAAGGGGACCTTGAAGTC
ET0127305      --> AGGTACTTGCTAGACAGAGGCCTACTGTGAGCAAAGGGGACCTTGAAGTC
ET0056157      --> .....CTTGCTAGACAGAGGCCTACTGTGAGCAAAGGGGACCTTGAAGTC
CT0067628      --> ..................................AGGGGACCTTGAAGTC
CT0070463      --> ..................................AGGGGACCTTGAAGTC
CT0072115      --> ..................................AGGGGACCTTGAAGTC
CT0077079      --> ..................................AGGGGACCTTGAAGTC
ET0142306      --> ...........................................gaAAGTC
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               701    -    751
RU05580        --> CATGAAAGGTTCACGAAA-GAATTTGGAGAGGAAGGGTGATGAATTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- CAT...............................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> CACGAAAGGTTCAacg..................................
CT0133838      --> CATGAAAGGTTCACGAAA-GAATTTGGAGAGGAAGGGTGATGAATTTTCT
ET0086751      --> CATGAAAGGTTCACGA..................................
CT0062950      --> CATGAAAGGTTCACGAAA-GAATTTGGAGAGGAAGGGTGATGAATTTTCT
ET0127305      --> CATGAAAGGTTCACGAAA-GAATTTGGAGAGGAAGGGTGATGAATTTTCT
ET0056157      --> CATGAAAGGTTCACGAAA-GAATTTGGAGAGGAAGGGTGATGAATTTTCT
CT0067628      --> CATGAAAGGTTCACGAAA-GAATTTGGAGAGGAAGGGTGATGAATTTTCT
CT0070463      --> CATGAAAGGTTCACGAAA-GAATTTGGAGAGGAAGGGTGATGAATTTTCT
CT0072115      --> CATGAAAGGTTCACGAAA-GAATTTGGAGAGGAAGGGTGATGAATTTTCT
CT0077079      --> CATGAAAGGTTCACGAAA-GAATTTGGAGAGGAAGGGTGATGAATTTTCT
ET0142306      --> CATGAAAGGTTCACGAAAAGAATTTGGAGAGGAAGGGTGATGAATTTTCT
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               751    -    801
RU05580        --> GTATCAA-TATCACATTGATCCACACTCGCCATCAGTGCAATTGCCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- .TATCAA-TATCACATTGATCCACACTAGCCATCAGTGCAATTGCCGTGA
CT0088762      <-- .TATCAA-TATCACATTGATCCACACTAGCCATCAGTGCAATTGCCGTGA
CT0087325      <-- ...TCAA-TATCACATTGATCCACACTAGCCATCAGTGCAATTGCCGTGA
ET0057364      <-- ........TATCACATTGATCCACACTCGCCATCAGTGCAATTGCCGTGA
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> GTATCAA-TATCACATTGATCCACACTCGCCATCAGT.............
ET0086751      --> ..................................................
CT0062950      --> GTATCAA-TATCACATTGATCCACACTAGCCATCAGTGCAATTGCCGTGA
ET0127305      --> GTATCAA-TATCACATTGATCCACACTCGCCATCAGTGCAATTGCCGT..
ET0056157      --> GTATCAA-TATCACATTGATCCACACTCGCCATCAGTGCAATT.......
CT0067628      --> GTATCAACTATCACATTGATCCACACTCGCCATCAGTGCAATTGCCGTGA
CT0070463      --> GTATCAA-TATCACATTGATCCACACTCGCCATCAGTGCAATTGCCGTGA
CT0072115      --> GTATCAA-TATCACATTGATCCACACTCGCCATCAGTGCAATTGCCGTGA
CT0077079      --> GTATCAA-TATCACATTGATCCACACTCGCCATCAGTGCAATTGCCGTGA
ET0142306      --> GTATCAA-TATCACATTGATCCACACTCGCCATCAGTGCAA.........
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               801    -    851
RU05580        --> TTAGCATGTATTAGTGTTGGATCTAATGGACTAAATACTCTACATT-AGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- TTAGCATGTATTAGTGTTGGATCTAATGGACTAAATACTCTACATT-AGT
CT0088762      <-- TTAGCATGTATTAGTGTTGGATCTAATGGACTAAATACTCTACATT-AGT
CT0087325      <-- TTAGTATGTATTAGTGTTGGATCTAATGGACTAAATACTCTACATT-AGT
ET0057364      <-- TTAGCATGTATTAGTGTTGGATCTAATGGACTAAATACTCTACATT-AGT
CT0110705      <-- ..................................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> TTAGCATGTATTAGTGTTGGATCTAATG......................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> TTAGCATGTATTAGTGTTGGATCTAATGGACTAAATACTCTACATT-AGT
CT0070463      --> TTAGCATGTATTAGTGTTGGATCTAATGGACTAAATACTCTACATT-AGT
CT0072115      --> TTAGCATGTATTAGTGTTGGATCTAATGGACTAAATACTCTACATT-AGT
CT0077079      --> TTAGCATGTATTAGTGTTGGATCTAATGGACTAAATACTCTACATTTAGT
ET0142306      --> ..................................................
ET0011128      --> ..................................ATACTCTACATT-AGT
ET0012610      --> ..................................ATACTCTACATT-AGT

               851    -    901
RU05580        --> TTCTTCAATGTGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- TTCTTCAATGTGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA
CT0088762      <-- TTCTTCAATGTGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA
CT0087325      <-- TTCTTCAATGTGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA
ET0057364      <-- TTCTTCAATGTGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA
CT0110705      <-- .........GTGGAAGGTGATATGACT--CCCTTTTTCCTTGTATTGAAA
CT0019756      <-- ..........TGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA
CT0031676      <-- ..........TGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA
ET0006121      <-- ..................................................
CT0030749      <-- ..................................................
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> TTCTTCAATGTGGAAGGTGATATGACTTTCCCTTTTTC--TGTATTGAAA
CT0070463      --> TTCTTCAATGTGGAAGGTGATATGACTTTCCCTTTTTC--TGTATTGAAA
CT0072115      --> TTCTTCAATGTGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA
CT0077079      --> TTCTTCAATGTGGAAGGTGATATGACTTtcc...................
ET0142306      --> ..................................................
ET0011128      --> TTCTTCAATGTGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA
ET0012610      --> TTCTTCAATGTGGAAGGTGATATGACTT-CCCTTTTTC--TGTATTGAAA

               901    -    951
RU05580        --> TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA
CT0088762      <-- TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA
CT0087325      <-- TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA
ET0057364      <-- TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA
CT0110705      <-- TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA
CT0019756      <-- TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA
CT0031676      <-- TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA
ET0006121      <-- ....................ATCGAGTTGCTTCTTTTCAACTTCTGTAAA
CT0030749      <-- ..........................TTGCTTCTTTTCAACTTCTGTAAA
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> TGGAAATATTGGTGTTTGATATCGAGTT......................
CT0070463      --> TGGAAATATTGGTGTTTGATATCGAGTT......................
CT0072115      --> TGGAAATATTGGTGTTTGATATCGAGTTG.....................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA
ET0012610      --> TGGAAATATTGGTGTTTGATATCGAGTTGCTTCTTTTCAACTTCTGTAAA

               951    -   1001
RU05580        --> GTACAGTTTAACATATAT-TTT-TTCAAGTGTTGATACATCAAATAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- GTACAGTTTAACATATAT-TTT-ATCAAGTGTTGATACAcc.........
CT0088762      <-- GTACAGTTTAACATATAT-TTT-ATCAAGTGTTGATACAcc.........
CT0087325      <-- GTACAGTTTAACATATAT-CTT-Tcttcaa....................
ET0057364      <-- GTACAGTTTAACATATAT-TTT-ATCAA......................
CT0110705      <-- GTACAGTTTAACATATATCTTTCTTCAAGTGTTGATACATCAAATAATGT
CT0019756      <-- GTACAGTTTAACATATAT-TTT-ATCAA......................
CT0031676      <-- GTACAGTTTAACATATAT-TTT-ATCAA......................
ET0006121      <-- GTACAGTTTAACATATAT-TTT-ATCAAGTGTTGATACATCAAATAATGT
CT0030749      <-- GTACAGTTTAACATATATCTTTCTTCAAGTGTTGATACATCAAATAATGT
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> GTACAGTTTAACATATAT-TTT-ATCAAGTGTTGATACATCAAAaaaaaa
ET0012610      --> GTACAGTTTAACATATAT-TTT-ATCAAGTGTTGATACATCAAAaaaaaa

               1001   -   1051
RU05580        --> TTGTCGCTCACATTGGTAGCTTCTCGAAACAGTAGTTGACCAACAGTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- TTGTCGCTCACATTGGTAGCTTCTCGAAACAGTAGTTGACCAACAattat
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- TTGTCGCT..........................................
CT0030749      <-- TTGTCGCTCACATTGGTAGCTTCTCGAAACAGTAGTTGACCAACAGTCAT
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               1051   -   1101
RU05580        --> CGAGGGAAGTAACACAAGACAAAGCACTTGTAATCTAACCAGATAATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0037698      <-- ..................................................
CT0118772      <-- ..................................................
CT0096035      <-- ..................................................
CT0122327      <-- ..................................................
CT0045552      <-- ..................................................
CT0083962      <-- ..................................................
CT0088762      <-- ..................................................
CT0087325      <-- ..................................................
ET0057364      <-- ..................................................
CT0110705      <-- ctggttagattac.....................................
CT0019756      <-- ..................................................
CT0031676      <-- ..................................................
ET0006121      <-- ..................................................
CT0030749      <-- CGAGGGAAGTAACACAAGACAAAGCACTTGTAATCTAACCAGATAATTGT
ET0123441      --> ..................................................
ET0125177      --> ..................................................
CT0063595      --> ..................................................
ET0033425      --> ..................................................
CT0065136      --> ..................................................
ET0011291      --> ..................................................
CT0053816      --> ..................................................
ET0138214      --> ..................................................
CT0135660      --> ..................................................
CT0129972      --> ..................................................
ET0121319      --> ..................................................
CT0133838      --> ..................................................
ET0086751      --> ..................................................
CT0062950      --> ..................................................
ET0127305      --> ..................................................
ET0056157      --> ..................................................
CT0067628      --> ..................................................
CT0070463      --> ..................................................
CT0072115      --> ..................................................
CT0077079      --> ..................................................
ET0142306      --> ..................................................
ET0011128      --> ..................................................
ET0012610      --> ..................................................

               1101   -   1151
RU05580        --> TG
                   ~~
CT0037698      <-- ..
CT0118772      <-- ..
CT0096035      <-- ..
CT0122327      <-- ..
CT0045552      <-- ..
CT0083962      <-- ..
CT0088762      <-- ..
CT0087325      <-- ..
ET0057364      <-- ..
CT0110705      <-- ..
CT0019756      <-- ..
CT0031676      <-- ..
ET0006121      <-- ..
CT0030749      <-- TG
ET0123441      --> ..
ET0125177      --> ..
CT0063595      --> ..
ET0033425      --> ..
CT0065136      --> ..
ET0011291      --> ..
CT0053816      --> ..
ET0138214      --> ..
CT0135660      --> ..
CT0129972      --> ..
ET0121319      --> ..
CT0133838      --> ..
ET0086751      --> ..
CT0062950      --> ..
ET0127305      --> ..
ET0056157      --> ..
CT0067628      --> ..
CT0070463      --> ..
CT0072115      --> ..
CT0077079      --> ..
ET0142306      --> ..
ET0011128      --> ..
ET0012610      --> ..