1 - 51
RU05699 --> TACATCGATCTTTCGAGAAA-GGCTCAGCCTTTGAAGTCTCGTGAAGCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- TACATCGATCCTTCGAGAAA-GGCTCAGCCTTTGAAGTCTCGTGAAGCAG
ET0071525 <-- ..................................................
CT0044953 <-- ..................................................
CT0074134 <-- ..................................................
ET0088939 <-- ..................................................
ET0112944 <-- ..................................................
ET0021824 <-- ..................................................
ET0136827 <-- ..................................................
ET0118806 <-- ..................................................
ET0119246 <-- ..................................................
ET0008792 <-- ..................................................
ET0132033 <-- ..................................................
ET0107368 --> .........CTTTCGAAAAAAGGCTCAGCCTTTGAAGTCTCGTGAAGCAG
CT0004635 --> ...........TTCGAGAAA-GGCTCAGCCTTTGAAGTCTCGTGAAGCAG
ET0002964 --> ...........................GCCTTTGAAGTCTCGTGAAGCAG
ET0060073 --> .........................................GTGAAGCAG
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> ..................................................
CT0083903 --> ..................................................
51 - 101
RU05699 --> CGAACGAAGAAAGACCAGCAAAACGCGAAGAATGGCGTCGTTTTT-GCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- CGAACGAAGAAAGACCAGCAAAACGCGAAGAATGGCGTCGTTTTT-GCAG
ET0071525 <-- ..................................................
CT0044953 <-- ..................................................
CT0074134 <-- ..................................................
ET0088939 <-- ..................................................
ET0112944 <-- ..................................................
ET0021824 <-- ..................................................
ET0136827 <-- ..................................................
ET0118806 <-- ..................................................
ET0119246 <-- ..................................................
ET0008792 <-- ..................................................
ET0132033 <-- ..................................................
ET0107368 --> CGAACGAAGAAAGACCAGCAAAACGCGAAGAATGGCGTCGTTTTT-GCAG
CT0004635 --> CGAACGAAGAAAGACCAGCAAAACGCGAAGAATGGCGTCGTTTTT-GCAG
ET0002964 --> CGAACGAAGAAAGACCAGCAAAACGCGAAGAATGGCGTCGTTTTTTGCAG
ET0060073 --> CGAACGAAGAAAGACCAGCAAAACGCGAAGAATGGCGTCGTTTTT-GCAG
ET0096947 --> ..................................................
ET0057132 --> ...............................................gtt
ET0077054 --> ..................................................
CT0083903 --> ..................................................
101 - 151
RU05699 --> TCGTTCATAGATCCAAGG-AAGAACTGGTTCGCCCGCCAGCACATGAAGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- TCGTTCATAGATCCAAGG-AAGAACTGGTTCGCCCGCCAGCACATGAAGG
ET0071525 <-- ..................................................
CT0044953 <-- ..................................................
CT0074134 <-- ..................................................
ET0088939 <-- ..................................................
ET0112944 <-- ..................................................
ET0021824 <-- ..................................................
ET0136827 <-- ..................................................
ET0118806 <-- ..................................................
ET0119246 <-- ..................................................
ET0008792 <-- ..................................................
ET0132033 <-- ..................................................
ET0107368 --> TCGTTCATAGATCCAAGG-AAGAACTGGTTCGCCCGCCAGCACATGAAGG
CT0004635 --> TCGTTCATAGATCCAAGG-AAGAACTGGTTCGCCCGCCAGCACATGAAGG
ET0002964 --> TCGTTCATAGATCCAAGG-AAGAACTGGTTCGCCCGCCAGCACATGAAGG
ET0060073 --> TCGTTCATAGATCCAAGG-AAGAACTGGTTCGCCCGCCAGCACATGAAGG
ET0096947 --> ..GTTCA-AGATCCAAGG-AAGAACTGGTTCGCCCGCCAGCACATGAAGG
ET0057132 --> tctattagtatTCCAAGGTAAGAACTGGTTCGCCCGCCAGCACATGAAGG
ET0077054 --> ..................................................
CT0083903 --> ..................................................
151 - 201
RU05699 --> CAATCTCCACGCGCCTCCGTCATTACGGGCTTCGATACGACGATCTGTAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- CAATCTCCACGCGCCTCCGTCATTACGGGCTTCGATACGACGATCTGTAC
ET0071525 <-- ..................................................
CT0044953 <-- ..................................................
CT0074134 <-- ..................................................
ET0088939 <-- ..................................................
ET0112944 <-- ..................................................
ET0021824 <-- ..................................................
ET0136827 <-- ..................................................
ET0118806 <-- ..................................................
ET0119246 <-- ..................................................
ET0008792 <-- ..................................................
ET0132033 <-- ..................................................
ET0107368 --> CAATCTCCACGCGCCTCCGTCATTACGGGCTTCGATACGACGATCTGTAC
CT0004635 --> CAATCTCCACGCGCCTCCGTCATTACGGGCTTCGATACGACGATCTGTAC
ET0002964 --> CAATCTCCACGCGCCTCCGTCATTACGGGCTTCGATACGACGATCTGTAC
ET0060073 --> CAATCTCCACGCGCCTCCGTCATTACGGGCTTCGATACGACGATCTGTAC
ET0096947 --> CAATCTCCACGCGCCTCCGTCATTACGGGCTTCGATACGACGATCTGTAC
ET0057132 --> CAATCTCCACGCGCCTCCGTCATTACGGGCTTCGATACGACGATCTGTAC
ET0077054 --> ..................................................
CT0083903 --> ..................................................
201 - 251
RU05699 --> GATCCCTACTACGATTTGGATATCAAGGAGGCTCTGCATCGGCTGCCCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- GATCCCTACTACGATTTGGATATCAAGGAGGCTCTGCATCG......... Control
ET0071525 <-- .......................................CGGCTGCCCAG Ethylene
CT0044953 <-- .................................................. Control
CT0074134 <-- .................................................. Control
ET0088939 <-- .................................................. Ethylene
ET0112944 <-- .................................................. Ethylene
ET0021824 <-- .................................................. Ethylene
ET0136827 <-- .................................................. Ethylene
ET0118806 <-- .................................................. Ethylene
ET0119246 <-- .................................................. Ethylene
ET0008792 <-- .................................................. Ethylene
ET0132033 <-- .................................................. Ethylene
ET0107368 --> GATCCCTACTACGATTTGGATATCAAGGAGGCTCTGAATCGGCTGCCCAG Ethylene
CT0004635 --> GATCCCTACTACGATTTGGATATCAAGGAGGCTCTGCATCGGCT...... Control
ET0002964 --> GATCCCTACTACGATTTGGATATCAAGGAGGCTCTGAATCGGCTGCCCAG Ethylene
ET0060073 --> GATCCCTACTACGATTTGGATATCAAGGAGGCTCTGAATCGGCTGCCCAG Ethylene
ET0096947 --> GATCCCTACTACGATTTGGATATCAc........................ Ethylene
ET0057132 --> GATCCCTACTACGATTTGGATATCA......................... Ethylene
ET0077054 --> .................................................. Ethylene
CT0083903 --> .................................................. Control
251 - 301
RU05699 --> AGAGATAGTCGACGCGCGCAACCAGCGTTTGAAGCGCGCCATGGACCTCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ..................................................
ET0071525 <-- AGAGATAGTCGACGCGCGCAACCAGCGTTTGAAGCGCGCCATGGACCTCT
CT0044953 <-- ..................................................
CT0074134 <-- ..................................................
ET0088939 <-- ..................................................
ET0112944 <-- ..................................................
ET0021824 <-- ..................................................
ET0136827 <-- ..................................................
ET0118806 <-- ..................................................
ET0119246 <-- ..................................................
ET0008792 <-- ..................................................
ET0132033 <-- ..................................................
ET0107368 --> AGA...............................................
CT0004635 --> ..................................................
ET0002964 --> AGAGATAGTCGACGCGCG................................
ET0060073 --> AGAGATAGTCGACGCGCGCAACCAGCGTT.....................
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> ..................................................
CT0083903 --> ..................................................
301 - 351
RU05699 --> CCATGAAGCACGAGTACCTCCCCGAAGATCTTCAGGCTATGCAAACTCCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ..................................................
ET0071525 <-- CCATGAAGCACGAGTACCTCCCCGAAGATCTTCAGGCTATGCAAACTCCA
CT0044953 <-- ..................................................
CT0074134 <-- ..................................................
ET0088939 <-- ..................................................
ET0112944 <-- ..................................................
ET0021824 <-- ..................................................
ET0136827 <-- ..................................................
ET0118806 <-- ..................................................
ET0119246 <-- ..................................................
ET0008792 <-- ..................................................
ET0132033 <-- ..................................................
ET0107368 --> ..................................................
CT0004635 --> ..................................................
ET0002964 --> ..................................................
ET0060073 --> ..................................................
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> ..................................................
CT0083903 --> ..................................................
351 - 401
RU05699 --> TTCAGAAGCTACCTTCAAGAAATGCTGGCTCTGGTGAAGAGGGAAAGGG-
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ..................................................
ET0071525 <-- TTCAGAAGCTACCTTCAAGAAATGCTGGCTCTGGTGAAGAGGGAAAGGG-
CT0044953 <-- .....AAGCTACCTTCAAGAAATGCTGGCTCTGGTGAAGAGGGAAAGGGG
CT0074134 <-- ..................................................
ET0088939 <-- ..................................................
ET0112944 <-- ..................................................
ET0021824 <-- ..................................................
ET0136827 <-- ..................................................
ET0118806 <-- ..................................................
ET0119246 <-- ..................................................
ET0008792 <-- ..................................................
ET0132033 <-- ..................................................
ET0107368 --> ..................................................
CT0004635 --> ..................................................
ET0002964 --> ..................................................
ET0060073 --> ..................................................
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> ...............................................GG-
CT0083903 --> ..................................................
401 - 451
RU05699 --> CAGAGCGTGAGGCTTTGGGAGCTCTGCCACTCTATCAGCGCACCATTCCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ..................................................
ET0071525 <-- CAGAGCGTGAGGCTTTGGGAGCTCTGCCACTCTATCAGCGCACCAatttc
CT0044953 <-- CAGAGCGTGAGGCTTTGGGAGCTCTCCCACTCTATCAGCGCACCATTCCA
CT0074134 <-- .......................................GCACCATTCCA
ET0088939 <-- ..................................................
ET0112944 <-- ..................................................
ET0021824 <-- ..................................................
ET0136827 <-- ..................................................
ET0118806 <-- ..................................................
ET0119246 <-- ..................................................
ET0008792 <-- ..................................................
ET0132033 <-- ..................................................
ET0107368 --> ..................................................
CT0004635 --> ..................................................
ET0002964 --> ..................................................
ET0060073 --> ..................................................
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> CAGAGCGTGAGGCTTTGGGAGCTCTCCCACTCTATCAGCGCACCATTCCA
CT0083903 --> ..................................................
451 - 501
RU05699 --> TAAGCATGCTATTGCTTCTTGT-AGCTAATTTTTATT-GG-AATGAATCT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ..................................................
ET0071525 <-- caataaagacaa......................................
CT0044953 <-- TAAGCATGCTATTGCTTCTTGT-AGCTAATTTTTATT-GG-AATGAATCT
CT0074134 <-- TAAGCATGATATTGCTTCTTGT-AGC-AATTTTTATTTGG-AATGAATCT
ET0088939 <-- ......TGCTATTGCTTCTTGTTAGCTAATTTTTATTTGGTAATGAATCT
ET0112944 <-- ......TGCTATTGCTTCTTGT-AGCTAATTTTTATT-GG-AATGAATCT
ET0021824 <-- ..............CTTCTTGT-AGCTAATTTTTATT-GG-AATGAATCT
ET0136827 <-- ...............TTCTTGT-AGCTAATTTT-ATT-GG-AATGAATCT
ET0118806 <-- ..................................ATT-GG-AATGAATCT
ET0119246 <-- ........................................tAATGAATCT
ET0008792 <-- .............................................AATCT
ET0132033 <-- ..................................................
ET0107368 --> ..................................................
CT0004635 --> ..................................................
ET0002964 --> ..................................................
ET0060073 --> ..................................................
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> TAAGCATGCTATTGCTTCTTGT-AGCTAATTTTTATT-GG-AATGAATCT
CT0083903 --> ..................................................
501 - 551
RU05699 --> TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ..................................................
ET0071525 <-- ..................................................
CT0044953 <-- TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCTATACCTTAAGG
CT0074134 <-- TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
ET0088939 <-- TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
ET0112944 <-- TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
ET0021824 <-- TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
ET0136827 <-- TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
ET0118806 <-- TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
ET0119246 <-- TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
ET0008792 <-- TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
ET0132033 <-- ............................................TTAAGG
ET0107368 --> ..................................................
CT0004635 --> ..................................................
ET0002964 --> ..................................................
ET0060073 --> ..................................................
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> TTGGATGAAATTATAGCAGTGTTTCTGGTAGATGCTTCCATACCTTAAGG
CT0083903 --> ..................................................
551 - 601
RU05699 --> GG-AATCTTTT-CCTGTTCTAG-AAGTTTTTCCCAATTATTGGGCACTTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ..................................................
ET0071525 <-- ..................................................
CT0044953 <-- GG-AATCTTTT-CCTGTTCTAG-AAGTTTTTCCCAATTATTGGGC.....
CT0074134 <-- GG-ATTCTTTT-CCTGTTCTAG-AAGTTTTTCGCAATTATTGGGCACTTG
ET0088939 <-- GG-AATCTTTT-CCTGTTCTAG-AAGTTTTTCCCAATTATTGGGCACTTG
ET0112944 <-- GG-AATCTTTT-CCTGTTCTAG-AAGTTTTTCCCAATTATTGGGCACTTG
ET0021824 <-- GG-AATCTTTT-CCTGTTCTAG-AAGTTTTTCCCAATTATTGGGCACTTG
ET0136827 <-- GG-AATCTTTT-CCTGTTCTAG-AAGTTTTTCCCAATTATTGGGCACTTG
ET0118806 <-- GG-ATTCTTTT-CCTGTTCTAG-AAGTTTTTCGCAATTATTGGGCACTTG
ET0119246 <-- GG-ATTCTTTT-CCTGTTCTAG-AAGTTTTTCCCAATTATTGGGCACTTG
ET0008792 <-- GG-ATTCTTTT-CCTGTTCTAG-AAGTTTTTCGCAATTATTGGGCACTTG
ET0132033 <-- GGGAATCTTTTTCCTGTTCTAG-AAGTTTTTCCCAATTATTGGGCACTTG
ET0107368 --> ..................................................
CT0004635 --> ..................................................
ET0002964 --> ..................................................
ET0060073 --> ..................................................
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> GG-AATCTTTT-CCTGTTCTAGTAAGTTTTTCCCAATTATTGGGCACTTG
CT0083903 --> GG-ATTCTTTT-CCTGTTCTAG-AAGTTTTTCCCAATTATTGGGCACTTG
601 - 651
RU05699 --> AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ..................................................
ET0071525 <-- ..................................................
CT0044953 <-- ..................................................
CT0074134 <-- AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
ET0088939 <-- AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
ET0112944 <-- AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
ET0021824 <-- AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
ET0136827 <-- AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
ET0118806 <-- AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
ET0119246 <-- AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
ET0008792 <-- AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
ET0132033 <-- AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
ET0107368 --> ..................................................
CT0004635 --> ..................................................
ET0002964 --> ..................................................
ET0060073 --> ..................................................
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTC..........
CT0083903 --> AGGACCAGAATTAAAACTTCCTGGATTTGCTGTCATATTCTGGAAGAGTA
651 - 701
RU05699 --> CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ..................................................
ET0071525 <-- ..................................................
CT0044953 <-- ..................................................
CT0074134 <-- CTTTGTTTTTC.......................................
ET0088939 <-- CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
ET0112944 <-- CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
ET0021824 <-- CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
ET0136827 <-- CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
ET0118806 <-- CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
ET0119246 <-- CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
ET0008792 <-- CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
ET0132033 <-- CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
ET0107368 --> ..................................................
CT0004635 --> ..................................................
ET0002964 --> ..................................................
ET0060073 --> ..................................................
ET0096947 --> ..................................................
ET0057132 --> ..................................................
ET0077054 --> ..................................................
CT0083903 --> CTTTGTTTTTCAATAATAATGTATGATCCAACTTTTGACTTCTTCAATAT
701 - 751
RU05699 --> TCTTGATTGCAAATAAAGACTACAATTTAGTACTAATTAGGGTAGAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0054344 <-- ...............................................
ET0071525 <-- ...............................................
CT0044953 <-- ...............................................
CT0074134 <-- ...............................................
ET0088939 <-- TCTTGATTGCAAtt.................................
ET0112944 <-- TCTTGATTGC.....................................
ET0021824 <-- TCTTGATTGCAAtaagctcatttgtct....................
ET0136827 <-- TCTTGATTGCAAtaagctcatttgccaaaa.................
ET0118806 <-- TCTTGATTGCAAATAAAGACTACAATTTAGTACTAATTAGGGTAGAC
ET0119246 <-- TCTTGATaataagctcatttgtctattgggtgca.............
ET0008792 <-- TCTTGATTGCAAtaagctcatttgtctattgggtgca..........
ET0132033 <-- TCTTGATTGCAAtaagctcatttgccaaa..................
ET0107368 --> ...............................................
CT0004635 --> ...............................................
ET0002964 --> ...............................................
ET0060073 --> ...............................................
ET0096947 --> ...............................................
ET0057132 --> ...............................................
ET0077054 --> ...............................................
CT0083903 --> TCTTGATaataagctcatttgtctaaaaaaaa...............
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