1 - 51
RU05786 --> ATGGCACAGATTGAAGTGTTAAGGAAGAAAGGGCATTCCTACTCAGAGAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- ATGGCACAGATTGAAGTGTTAAGGAAGAAAGGGCACTCCTACTCAGAGAT
CT0063081 <-- .................................cacTCCTACTCAGAGAT
ET0025687 <-- ..................................................
CT0089351 <-- ..................................................
ET0065378 <-- ..................................................
ET0089255 <-- ..................................................
CT0024046 <-- ..................................................
ET0083788 <-- ..................................................
CT0113789 --> ........GATTGAAGTGTTAAGGAAGAAAGGGCATTCCTACTCAGAGAT
CT0018865 --> ..................................................
CT0013652 --> ..................................................
ET0000140 --> ..................................................
CT0056563 --> ..................................................
CT0068115 --> ..................................................
CT0110932 --> ..................................................
ET0009351 --> ..................................................
CT0065240 --> ..................................................
ET0114863 --> ..................................................
CT0014054 --> ..................................................
CT0045433 --> ..................................................
ET0082645 --> ..................................................
ET0012409 --> ..................................................
51 - 101
RU05786 --> AATCAACGAAAGTGTAATCGAGTCGGTGGATTCTTTGAATCCTTTTATGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- AATCAACGAAAGTGTAATCGAGTCGGTGGATTCTTTGAATCCTTTTATGC
CT0063081 <-- AATCAACGAAAGTGTAATCGAGTCGGTGGATTCTTTGAATCCTTTTATGC
ET0025687 <-- ........AAAGTGTAATCGAGTCGGTGGATTCTTTGAATCCTTTTATGC
CT0089351 <-- .................................TTTGAATCCTTTTATGC
ET0065378 <-- ..................................................
ET0089255 <-- ..................................................
CT0024046 <-- ..................................................
ET0083788 <-- ..................................................
CT0113789 --> AATCAACGAAAGTGTAATCGAGTCGGTGGATTCTTTGAATCCTTTTATGC
CT0018865 --> ..................................................
CT0013652 --> ................................................ga
ET0000140 --> ..................................................
CT0056563 --> ..................................................
CT0068115 --> ..................................................
CT0110932 --> ..................................................
ET0009351 --> ..................................................
CT0065240 --> ..................................................
ET0114863 --> ..................................................
CT0014054 --> ..................................................
CT0045433 --> ..................................................
ET0082645 --> ..................................................
ET0012409 --> ..................................................
101 - 151
RU05786 --> ATGCTAGGGGAGTTTCTTTCATGGTTGATAATTGC-CAACAACAGCGCGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- ATGCTAGGGGAGTTTCTTTCATGGTTGATAATTGCTCAACAACAGCGCGG
CT0063081 <-- ATGCTAGGGGAGTTTCTTTCATGGTTGATAATTGC-CAACAACAGCGCGG
ET0025687 <-- ATGCTAGGGGAGTTTCTTTCATGGTTGATAATTGCTCAACAACAGCGCGG
CT0089351 <-- ATGCTAGGGGAGTTTCTTTCATGGTTGATAATTGCTCAACAACAGCGCGG
ET0065378 <-- ..................................................
ET0089255 <-- ..................................................
CT0024046 <-- ..................................................
ET0083788 <-- ..................................................
CT0113789 --> ATGCTAGGGGAGTTTCTTTCATGGTTGATAATTGCTCAACAACAGCGCGG
CT0018865 --> ...CTAGGGGAGTTTCTTTCATGGTTGATAATTGCTCAACAACAGCGCGG
CT0013652 --> acaaatgaggtatgatgctgaatGTTGATAATTGCTCAACAACAGCGCGG
ET0000140 --> ..................................................
CT0056563 --> ..................................................
CT0068115 --> ..................................................
CT0110932 --> ..................................................
ET0009351 --> ..................................................
CT0065240 --> ..................................................
ET0114863 --> ..................................................
CT0014054 --> ..................................................
CT0045433 --> ..................................................
ET0082645 --> ..................................................
ET0012409 --> ..................................................
151 - 201
RU05786 --> TTGGGATCAAGGAAATGGGCTCCAAGATTTGATTATATTCTAACTCAGCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- TTGGGATCAAGGAAATGGGCTCCAAGATTTGATTATATTCTAACTCAGCA
CT0063081 <-- TTGGGATCAAGGAAATGGGCTCCAAGATTTGATTATATTCTAACTCAGCA
ET0025687 <-- TTGGGATCAAGGAAATGGGCTCCAAGATTTGATTATATTCTAACTCAGCA
CT0089351 <-- TTGGGATCAAGGAAATGGGCTCCAAGATTTGATTATATTCTAACTCAGCA
ET0065378 <-- ..................................................
ET0089255 <-- ..................................................
CT0024046 <-- ..................................................
ET0083788 <-- ..................................................
CT0113789 --> TTGGGATCAAGGAAATGGGCTCCAAGATTTGATTATATTCTAACTCAGCA
CT0018865 --> TTGGGATCAAGGAAATGGGCTCCAAGATTTGATTATATTCTAACTCAGCA
CT0013652 --> TTGGGATCAAGGAAATGGGCTCCAAGATTTGATTATATTCTAACTCAGCA
ET0000140 --> ................GGGCTCCAAGATTTGATTATATTCTAACTCAGCA
CT0056563 --> .........................................AACTCAGCA
CT0068115 --> ..................................................
CT0110932 --> ..................................................
ET0009351 --> ..................................................
CT0065240 --> ..................................................
ET0114863 --> ..................................................
CT0014054 --> ..................................................
CT0045433 --> ..................................................
ET0082645 --> ..................................................
ET0012409 --> ..................................................
201 - 251
RU05786 --> AGCTTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACCTCATTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- AGCTTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGAC.......
CT0063081 <-- AGCCTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACaatacag
ET0025687 <-- AGCTTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACCTCATTA
CT0089351 <-- AGCCTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACCTCAT..
ET0065378 <-- ..................................................
ET0089255 <-- ..................................................
CT0024046 <-- ..................................................
ET0083788 <-- ..................................................
CT0113789 --> AGCCTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACCTCATTA
CT0018865 --> AGCCTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACCTCATTA
CT0013652 --> AGCCTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACCTCATTA
ET0000140 --> AGCCTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACCTCATTA
CT0056563 --> AGCCTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACCTCATTA
CT0068115 --> ...cTTGGTTGCCGTGGACAACGGTACACCCATCAATCAGGACCTCATTA
CT0110932 --> ...........................ACCCATCAATCAGGACCTCATTA
ET0009351 --> ..................................................
CT0065240 --> ..................................................
ET0114863 --> ..................................................
CT0014054 --> ..................................................
CT0045433 --> ..................................................
ET0082645 --> ..................................................
ET0012409 --> ..................................................
251 - 301
RU05786 --> GCAACTTCATGTCAGATCCAGTGCAT-GGAGCCATTGAAGTATGTGCTCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- ..................................................
CT0063081 <-- gc................................................
ET0025687 <-- GCAACTTCATGTCAGATCCAGTGCAT-GGAGCCATTGAAGTA........
CT0089351 <-- ..................................................
ET0065378 <-- ..................CAGTGCAT-GGAGCCATTGAAGTATGTGCTCA
ET0089255 <-- ..................CAGTGCAT-GGAGCCATTGAAGTATGTGCTCA
CT0024046 <-- ..................................................
ET0083788 <-- ..................................................
CT0113789 --> GCAA..............................................
CT0018865 --> GCAACTTCATGTCAGATCCAGTGCAT-GGAGCCATTGA............
CT0013652 --> ..................................................
ET0000140 --> GCAACTTCATGTCAGATCCAGTGCAT-GGAGCCATTGAAGTATGTGCTCA
CT0056563 --> GCAACTTCATGTCAGATCCAGTGCAT-GGAGCCATTGAAGTATGTGCTCA
CT0068115 --> GCAACTTCATGTCAGATCCAGTGCAT-GGAGCCATTGAAGTATGTGCTCA
CT0110932 --> GCAACTTCATGTCAGATCCAGTGCATTGGAGCCATTGAAGTATGTGCTCA
ET0009351 --> ..................CAGTGCAT-GGAGCCATTGAAGTATGTGCTCA
CT0065240 --> .................................................t
ET0114863 --> ..................................................
CT0014054 --> ..................................................
CT0045433 --> ..................................................
ET0082645 --> ..................................................
ET0012409 --> ..................................................
301 - 351
RU05786 --> ACTGAGACCCACTGTTGATATTTCAGTGCCTGCTGATGCAGACTTTGTGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- ..................................................
CT0063081 <-- ..................................................
ET0025687 <-- ..................................................
CT0089351 <-- ..................................................
ET0065378 <-- ACTGAGACCCACTGTTGATATTTCAGTGCCTGCTGATGCAGACTTTGTGC
ET0089255 <-- ACTGAGACCCACTGTTGATATTTCAGTGCCTGCTGATGCAGACTTTGTGC
CT0024046 <-- ..................................................
ET0083788 <-- ..................................................
CT0113789 --> ..................................................
CT0018865 --> ..................................................
CT0013652 --> ..................................................
ET0000140 --> ACTGAGA...........................................
CT0056563 --> ACTGAGACCCACTGTTGATATTTCAGTGCCTGCTGATGCAGACTTTGTGC
CT0068115 --> ACTGAGACCCACTGTTGATATTTCAGTGCCTGCTGATGCAGACTTTGTGC
CT0110932 --> AC................................................
ET0009351 --> ACTGAGACCCACTGTTGATATTTCAGTGCCTGCTGATGCAGACTTTGTGC
CT0065240 --> ACTGAGACCCACTGTTGATATTTCAGTGCCTGCTGATGCAGACTTTGTGC
ET0114863 --> ..................................................
CT0014054 --> ..................................................
CT0045433 --> ..................................................
ET0082645 --> ..................................................
ET0012409 --> ..................................................
351 - 401
RU05786 --> GACCAGAGTTGCGCCAATCTAGCAATTAGAG-CTTGAAGAACCTACTACG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- ..................................................
CT0063081 <-- ..................................................
ET0025687 <-- ..................................................
CT0089351 <-- ..................................................
ET0065378 <-- GACCAGAGTTGCGCCAATCTAGCAATTAGAG-CTTGAAGAACCTACTACG
ET0089255 <-- GACCAGAGTTGCGCCAATCTAGCAATTAGAG-CTTGAAGAACCTACTACG
CT0024046 <-- ....................AGCAATTAGAG-CTTGAAGAACCTACTACG
ET0083788 <-- ..................................................
CT0113789 --> ..................................................
CT0018865 --> ..................................................
CT0013652 --> ..................................................
ET0000140 --> ..................................................
CT0056563 --> GACCAGAGTTGCGCCAATCTAGCAATTAGAG-CTTGAAacg.........
CT0068115 --> GACCAGAGTTGCGCCAATCTAGCAATTAGAG-CTTGAAac..........
CT0110932 --> ..................................................
ET0009351 --> GACCAGAGTTGCGCCAATCTAGCAATTAGAG-CTTGAAGAACCTACTACG
CT0065240 --> GACCAGAGTTGCGCCAATCTAGCAATTAGAGTCTTGAAGAACCTACTACG
ET0114863 --> ..............CAATCTAGCAATTAGAG-CTTGAAGAACCTACTACG
CT0014054 --> ..................................................
CT0045433 --> ..................................................
ET0082645 --> ..................................................
ET0012409 --> ..................................................
401 - 451
RU05786 --> TTAGCTGGCCTACAAAA-TCGTTTTCCGGGAAGTAATGTTTGAGTGCTGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- ..................................................
CT0063081 <-- ..................................................
ET0025687 <-- ..................................................
CT0089351 <-- ..................................................
ET0065378 <-- TTAGCTGGCCTACAAAA-TCGTTTTCCGGGAAGTAATGTTTGAGTGCTGT
ET0089255 <-- TTAGCTGGCCTACAAAA-TCGTTTTCCGGGAAGTAATGTTTGAGTGCTGT
CT0024046 <-- TTAGCTGGCCTACAAAAATCGTTTTCCGGGAAGTAATGTTTGAGTGCTGT
ET0083788 <-- ..................................................
CT0113789 --> ..................................................
CT0018865 --> ..................................................
CT0013652 --> ..................................................
ET0000140 --> ..................................................
CT0056563 --> ..................................................
CT0068115 --> ..................................................
CT0110932 --> ..................................................
ET0009351 --> TTAGCTGGCCTACAAAA-TCGTTTTCCGGGAAGTAATGTTTGAGTGCTGT
CT0065240 --> TTAGCTGGCCTACAAAA-TCGTTTTCCGGGAAGTAATGTTTGAGTGCTGT
ET0114863 --> TTAGCTGGCCTACAAAA-TCGTTTTCCGGGAAGTAATGTTTGAGTGCTGT
CT0014054 --> TTAGCTGGCCTACAAAA-TCGTTTTCCGGGAAGTAATGTTTGAGTGCTGT
CT0045433 --> ....CTGGCCTACAAAA-TCGTTTTCCGGGAAGTAATGTTTGAGTGCTGT
ET0082645 --> ...............................AGTAATGTTTGAGTGCTGT
ET0012409 --> ..................................................
451 - 501
RU05786 --> AGCTTTGCCCAGTTTGTCTTGTGTT-ACATCGTCTA-CCCATGTACTTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- ..................................................
CT0063081 <-- ..................................................
ET0025687 <-- ..................................................
CT0089351 <-- ..................................................
ET0065378 <-- AGCTTTGCCCAGTTTGTCTT..............................
ET0089255 <-- AGCTTTGCCCAGTTTGTCTT..............................
CT0024046 <-- AGCTTTGCCCAGTTTGTCTTGTGTT-ACATCGTCTA-CCCATGTACTTTT
ET0083788 <-- .....................................CCCATGTACTTTT
CT0113789 --> ..................................................
CT0018865 --> ..................................................
CT0013652 --> ..................................................
ET0000140 --> ..................................................
CT0056563 --> ..................................................
CT0068115 --> ..................................................
CT0110932 --> ..................................................
ET0009351 --> AGCTTTGCCCAGTTTGT.................................
CT0065240 --> AGCTTTGCCCAGTTTGTCTTGTGTTTACATCGTCTA-CCCATGTACTTTT
ET0114863 --> AGCTTTGCCCAGTTTGTCTTGTGTT-ACATCGTCTATCCCATGTACTTTT
CT0014054 --> AGCTTTGCCCAGTTTGTCTTGTGTT-ACATCGTCTA-CCCATGTACTTTT
CT0045433 --> AGCTTTGCCCAGTTTGTCTTGTGTT-ACATCGTCTATCCCATGTACTTTT
ET0082645 --> AGCTTTGCCCAGTTTGTCTTGTGTT-ACATCGTCTATCCCATGTACTTTT
ET0012409 --> .............................................CTTTT
501 - 551
RU05786 --> ATTGCAATGCACGTTATGTTTCTTATGAACAAATGAGGTATGATGCTGAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- ..................................................
CT0063081 <-- ..................................................
ET0025687 <-- ..................................................
CT0089351 <-- ..................................................
ET0065378 <-- ..................................................
ET0089255 <-- ..................................................
CT0024046 <-- ATTGCAATGCACGTTATGTTTCTTATGAACAAATGAGGTATGATGCTGAA
ET0083788 <-- ATTGCAATGCACGTTATGTTTCTTATGAACAAATGAGGTATGATGCTGAA
CT0113789 --> ..................................................
CT0018865 --> ..................................................
CT0013652 --> ..................................................
ET0000140 --> ..................................................
CT0056563 --> ..................................................
CT0068115 --> ..................................................
CT0110932 --> ..................................................
ET0009351 --> ..................................................
CT0065240 --> ATTGCAATGCACGTTATGTTTCTTATcgaa....................
ET0114863 --> ATTGCAATGCACGTTATGTTTCTTATGAACAAATGAGGTATGATGCTGAA
CT0014054 --> ATTGCAATGCACGTTATGTTTCTTATGAACAAATGAGGTATGATGCTGAA
CT0045433 --> ATTGCAATGCACGTTATGTTTCTTATGAACAAATGAGGTATGATGCTGAA
ET0082645 --> ATTGCAATGCACGTTATGTTTCTTATGAACAAATGAGGTATGATGCTGAA
ET0012409 --> ATTGCAATGGACGTTATGTTTCTTATGAACAAATGAGGTATGATGCTGAA
551 - 601
RU05786 --> TGTTGTATTAATAATTTCTGTGGTAGTAATAATTAGTTAAATAAAGTTGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- .................................................. Ethylene
CT0063081 <-- .................................................. Control
ET0025687 <-- .................................................. Ethylene
CT0089351 <-- .................................................. Control
ET0065378 <-- .................................................. Ethylene
ET0089255 <-- .................................................. Ethylene
CT0024046 <-- TGTTGTATTAATAATTTCTGTGGTAGTAATAATTAGTT............ Control
ET0083788 <-- TGTTGTACTAATTATTactacca........................... Ethylene
CT0113789 --> .................................................. Control
CT0018865 --> .................................................. Control
CT0013652 --> .................................................. Control
ET0000140 --> .................................................. Ethylene
CT0056563 --> .................................................. Control
CT0068115 --> .................................................. Control
CT0110932 --> .................................................. Control
ET0009351 --> .................................................. Ethylene
CT0065240 --> .................................................. Control
ET0114863 --> TGTTGTATTAATAATTTCTGTGGTACTAATAATTAGTTAAATAAAGTTGG Ethylene
CT0014054 --> TGTTGTATTAATAATTTCTGTGGTAGTAATAATTAGTTAAATAAAGTTGG Control
CT0045433 --> TGTTGTATTAATAATTTCTGTGGTAactaaaaaa................ Control
ET0082645 --> TGTTGTATTAATAATTTCTGTGGTACTAATAATTAGTTAAATAAAGTTGG Ethylene
ET0012409 --> TGTTGTATTAATAATTTCTGTGGTACTAATAATTAGTTAAATAAAGTTGG Ethylene
601 - 651
RU05786 --> CCCTTTTTATGGTGTTCCTGGTATCAGAACTAGCGAAACTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0117168 <-- .........................................
CT0063081 <-- .........................................
ET0025687 <-- .........................................
CT0089351 <-- .........................................
ET0065378 <-- .........................................
ET0089255 <-- .........................................
CT0024046 <-- .........................................
ET0083788 <-- .........................................
CT0113789 --> .........................................
CT0018865 --> .........................................
CT0013652 --> .........................................
ET0000140 --> .........................................
CT0056563 --> .........................................
CT0068115 --> .........................................
CT0110932 --> .........................................
ET0009351 --> .........................................
CT0065240 --> .........................................
ET0114863 --> CCCTTTTTATGGTGTTCCTaggt..................
CT0014054 --> CCCTTTTTATGGTaaaaaaaa....................
CT0045433 --> .........................................
ET0082645 --> CCCTTTTTATGGTGTTCCTGGTATCAGAACTAGCGAAACTT
ET0012409 --> CCCTTTTTATGGTGaaaaaaaaa..................
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