Rose Transcriptome Database

               1      -     51
RU05787        --> CAACATGACTAGGGGGAACGATGACCGTAGGGGAAGTATGATTAGGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- CAACATGACTAGGGGGAACGATGACCGTAGGGGAAGTATGATTAGGTCAA
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               51     -    101
RU05787        --> AAATTACCAGAACTTCAATAAGAAAGACGTATCACAATCATATTCAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- AAATTACCAGAACTTCAATAAGAAAGACGTATCACAATCATATTCAAGCT
ET0128029      <-- ........................................TATTCAAGCT
ET0128421      <-- ........................................TATTCAAGCT
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..........................................TTCAAGCT
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               101    -    151
RU05787        --> GCACCTCATGAGGTCCAAAGAAAGGCCTAATGATGGGTTTTACT-GTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- GCACCTCATGAGGTCCAAAGAAAGGCCTAACCATGGATTTTACTTGTCTC
ET0128029      <-- GCACCTCATGAGGTCCAAAGAAAGGCCTAATGATGGGTTTTACT-GTCTC
ET0128421      <-- GCACCTCATGAGGTCCAAAGAAAGGCCTAATGATGGGTTTTACT-GTCTC
ET0023992      <-- .................................................C
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> GCACCTCATGAGGTCCAAAGAAAGGCCTAATGATGGGTTTTACT-GTCTC
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               151    -    201
RU05787        --> ACGCATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ACGCATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
ET0128029      <-- ACGCATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
ET0128421      <-- ACGCATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
ET0023992      <-- ACGCATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
ET0094022      <-- ...................ATGATTGGGAACTTCAGCTTGGCTGTCCAGA
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ACGCATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
CT0033850      --> ...CATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
CT0042646      --> ...CATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
CT0045150      --> ...CATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
CT0048320      --> ...CATGCTCATCATTCACATGATTGGGAACTTCAGCTTGGCTGTCCAGA
ET0015438      --> ..........................GGAACTTCGGCTTGGCTGTCCAGA
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               201    -    251
RU05787        --> GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- GGCATATACTGTGCCATTATAGCTC.........................
ET0128029      <-- GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
ET0128421      <-- GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
ET0023992      <-- GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
ET0094022      <-- GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
ET0138229      <-- ....TATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
CT0033850      --> GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
CT0042646      --> GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
CT0045150      --> GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
CT0048320      --> GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
ET0015438      --> GGCATATACTGTGCCATTATAGCTCTAATTTCTGAATCCATGTATGACCG
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               251    -    301
RU05787        --> TAATCGATATTTGTACACAAGATAT-GCCCCACCAGAAGCCATAGCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- TAAT..............................................
ET0128421      <-- TAAT..............................................
ET0023992      <-- TAATCGATATTTGTACACAAGATAT-GCCCCACCAGAAGCCATAGCCAAG
ET0094022      <-- TAATCGATATTTGTACACAAGATAT-GCCCCACCAGAAGCCATAGCCAAG
ET0138229      <-- TAATCGATATTTGTACACAAGATATCGCCCCACCAGAAGCCATAGCCAAG
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> TAATCGATATTTGTACACAAGATAT-GCCCCACCAGAAGCCATAGCCAAG
CT0033850      --> TAATCGATATTTGTACACAAGATAT-GCCCCACCAGAAGCCATAGCCAAG
CT0042646      --> TAATCGATATTTGTACACAAGATAT-GCCCCACCAGAAGCCATAGCCAAG
CT0045150      --> TAATCGATATTTGTACACAAGATAT-GCCCCACCAGAAGCCATAGCCAAG
CT0048320      --> TAATCGATATTTGTACACAAGATAT-GCCCCACCAGAAGCCATAGCCAAG
ET0015438      --> TAATCGATATTTGTACACAAGATAT-GCCCCACCAGAAGCCATAGCCAAG
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               301    -    351
RU05787        --> CTA--TAAAATAACCCACACAGCAGCCCATGCAGATGATTTTGATCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- CCAATTAAAATAACCCACACAGCAGCCC......................
ET0094022      <-- CCAATTAAAATAACCCACACAGCAGCCCATG...................
ET0138229      <-- CTA--TAAAATAACCCACACAGCAGCCCATGCAGATGATTTTGATCCTCC
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> Ccaattaaaata......................................
CT0033850      --> CCAATTAAAATAACCCACACAGCAGCCCATGCAGATGATTTTGA......
CT0042646      --> CCAATTAAAATAACCCACACAGCAGCCCATGCAGATGATTTTGA......
CT0045150      --> CCAATTAAAATAACCCACACAGCAGCCCATGCAGATGATTTTGA......
CT0048320      --> CCAATTAAAATAACCCACACAGCAGCCCATGCAGATGATTTTGA......
ET0015438      --> CCAATTAAAATAACCCACACAGCAGCCCATGCAGATGATTTTGATCCTCC
CT0045723      --> ..aatTAAAATAACCCACACAGCAGCCCATGCAGATGATTTTGATCCTCC
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               351    -    401
RU05787        --> AGAAGTCTTGCTTATGCAGGTGTCATGATCTTTGATATACAAAAGATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- AGAAGTCTTGCTTATGCAGGTGTCATGATCTTTGATATACAAAAGATTTC
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> AGAAGTCTTGCTTATGCAGGTGTCATGATCT...................
CT0045723      --> AGAAGTCTTGCTTATGCAGGTGTCATGATCTTTGATATACAAAAGATTTC
ET0084521      --> ...................................atcaaagatcatgac
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               401    -    451
RU05787        --> CACTACATGAGCAGTCATAACTTCCCCAGGTATTTTTACAGGAGCATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- CACTACATGAGCAGTCATAAC.............................
CT0059990      <-- .......................................AGGAGCATTCA
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> CACTACATGAGCAGTCATAACTTCCCCAGGTATTTTTACAGGAGCATTCA
ET0084521      --> acctgCATAAGCAGTCATAACTTCCCCAGGTATTTTTACAGGAGCATTCA
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               451    -    501
RU05787        --> GGGCACTGACAGGCTTTCTTCTCTTTGCATTCATCGATATCTTCACAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- GGGCACTGACAGACTTTCTTCTCTTTGCATTCATCAATATCTTCGCAAGT
CT0006897      <-- .........................gtCATTCATTGATATCTTCACAAGT
ET0131373      <-- ................tttttttttgtCATTCATCGATATCTTCACAAGT
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> GGGCACTGACAGGCTTTCTTCTCTTTGCATTCATCGATATCTTCACAAGT
ET0084521      --> GGGCACTGACAGGCTTTCTTCTCTTTGCATTCATCGATATCTTCACAAGT
ET0022920      --> ............................ATTCATTGATATCTTCACAAGT
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               501    -    551
RU05787        --> TTTCACACCATCACCTTTAAATCCAGGAGGACACTTGCATTGCACCCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- TTTCACACCGTCACCTTTAAATCCAGGAGGACACTTGCATTGCACCCCTC
CT0006897      <-- TTTCACACCATCACCTTTAAATCCAGGAGGACACTTGCATTGCACCCCTC
ET0131373      <-- TTTCACACCATCACCTTTAAACCCAGGAGGACACTTGCATTGCACCCCTC
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> TTTCACACCATCACCTTTAA..............................
ET0084521      --> TTTCACACCATCACCTTTAAACCCAGGAGGACACTTGCATTGCACCCCTC
ET0022920      --> TTTCACACCATCACCTTTAAATCCAGGAGGACACTTGCATTGCACCCCTC
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               551    -    601
RU05787        --> CATCATCTGTACAAGCAGAGAATGCATGCCCATCTCGAGCTTCATGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- CATCATCTGTACAAGCAGAGAATGCATGCCCATCTCGAGCTTCATGCCAA
CT0006897      <-- CATCATCTGTACAAGCAGAGAATGCATGCCCATCTCGAGC..........
ET0131373      <-- CATCATCTGTACAAGCAGAGAATGCATGCCCATCTCGAGCTTCATGCCAA
RH45BR156      <-- ..........ACAAGCAGAGAATGCATGCCCGTCTCGAGCTTCATGCCAA
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> CATCATCTGTACAAGCAGAGAATGCATGCCCATCTCGAGCTTCATGCCAA
ET0022920      --> CATCATCTGTACAAGCAGAGAATGCATGCCCATCTCGAGCTTCATGCCAA
ET0109851      --> ................................................AA
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               601    -    651
RU05787        --> CAACCTCCATTGTTTACCTTGCACCTCCCAGGCCCACTTGCTTCACAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- CAACCTCCATTGTTTACCTTGCACCTCCCAGGCCCACTTGCTTCACAGGT
CT0006897      <-- ..................................................
ET0131373      <-- CAACCTCCATTGTTTACCTTGCACCTCCCAGGCCCACTTGCTTCACAGGT
RH45BR156      <-- CAACCTCCATTGTTTACCTTGCACCTCCCAGGCCCACTTGCTTCACAGGT
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> CA................................................
ET0022920      --> CAACCTCCATTGTTTACCTTGCACCTCCCAGGCCCACTTGCTTCACAGGT
ET0109851      --> CAACCTCCATTGTTTACCTTGCACCTCCCAGGCCCACTTGCTTCACAGGT
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               651    -    701
RU05787        --> AGTGTAACCATCTCCTTTGAACTGCACACCATCAACGAGAGGGCACTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- AGTGTAAC..........................................
CT0006897      <-- ..................................................
ET0131373      <-- AGTGTAACCATCTCCTTTGAACTGAACACCA...................
RH45BR156      <-- AGTGTAACCATCTCCTTTGAACTGCACACCATCAACGAGAGGGCACTCAC
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> AGTGTAACCATCTCCTT-GAACTGCACACCATCAACGAGAGGGCACTCAC
ET0109851      --> AGTGTAACCATCTCCTTTGAACTGCACACCATCAACAAGAGGGCACTCAC
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               701    -    751
RU05787        --> ATACCCTCCCACGAAAGGTATCCTTGCAGGCTGTAATGTTGGCAGCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ATACCCTCCCACGAAAGGTATCCTTGCAGGCTGTAATGTTGGCAGCTTTA
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ATACCCTCCCACGAAAGGTATCCTTGCAGGCTGTAATGTTGGCAGCTTTA
ET0012265      --> .....................CCTTGCAGGCTGTAATGTTGGCAGCTTTA
ET0032488      --> .....................CCTTGCAGGCTGTAATGTTGGCAGCTTTA
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               751    -    801
RU05787        --> TTTTGCCAGCAACCACCATTATTGTCCAAACACTCATTTGTCTCAACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- TTTTGCCAGCAACCACCATTATTGTCCAAACACTCATTTGTCTCAACATC
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> TTTTGCCAGCAACCACCATTATTGTCCAAACACTCATTTGTCTCAACATC
ET0012265      --> TTTTGCCAGCAACCACCATTATTGTCCAAACACTCATTTGTCTCAACATC
ET0032488      --> TTTTGCCAGCAACCACCATTATTGTCCAAACACTCATTTGTCTCAACATC
CT0023881      --> ..........AACCACCATTATTGTCCAAACACTCATTTGTCTCAACATC
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               801    -    851
RU05787        --> AGTACTCAAGCAAACAGCTGGCTCAGTAGTTTCTTCAAAACCAGAACAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- AGT...............................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> AGTACTCAAGCAAACAGCTGGCTCAGTAGTTTCTTCAAAA..........
ET0012265      --> AGTACTCAAGCAAACAGCTGGCTCAGTAGTTTCTTCAAAACCAGAACAGA
ET0032488      --> AGTACTCAAGCAAACAGCTGGCTCAGTAGTTTCTTCAAAACCAGAACAGA
CT0023881      --> AGTACTCAAGCAAACAGCTGGCTCAGTAGTTTCTTCAAAACCAGAACAGA
RH20R114       --> ...ACTCAAGCAAACAGCTGGCTCAGTAGTTTCTTCAAAACCAGAACAGA
CT0086811      --> ...............................TCTTCAAAACCAGAACAGA
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               851    -    901
RU05787        --> TGGCCTTCAGAACTGCACTTTTTGCCAACTTTCCTCGGTATTGTCGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> TGGCCTTCAGAACTGCACTTTTTGCCAACTTTCCTCGGTATTGTCGATTA
ET0032488      --> TGGCCTTCAGAACTGCACTTTTTGCCAACTTTCCTCGGTATTGTCGATTA
CT0023881      --> TGGCCTTCAGAACTGCACTTTTCGCCAACTTTCCTCGGTATTGTCGATTA
RH20R114       --> TGGCCTTCAGAACTGCACTTTTTGCCAACTTTCCTCGGTATTGTCGATTA
CT0086811      --> TGGCCTTCAGAACTGCACTTTTCGCCAACTTTCCTCGGTATTGTCGATTA
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               901    -    951
RU05787        --> TTGACAACAAGTGTAGGCAATATGGTTACATCACCTCTTGTTCCCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> TTGA..............................................
ET0032488      --> TTGA..............................................
CT0023881      --> TTGACAACAAGTGTAGGCAATATGGTTACATCA.................
RH20R114       --> TTGACAACAAGTGTAGGCAATATGGTCACATCACCTCTTGTTCCCTTCCC
CT0086811      --> TTGACAACAAGTGTAGGCAATATGGTTACATCACCTCTTGTTCCCTTCCC
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               951    -   1001
RU05787        --> AACCTGAGCATCTTGCTCCTCTTTCAGAACAGGATTTTCAGAGTCTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> AACCTGAGCATCTTGCTCCTCTTTCAGAACAGGATTTTCAGAGTCTGCAT
CT0086811      --> AACCTGAGCATCTTG...................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1001   -   1051
RU05787        --> CTGAGTTTCCCATACACTTGTCGATCTTCTTACTATCAAGCCCAAGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> CTGAGTTTCCCATACACTTGTCGATCTTCTTACTATCAAGCCCAAGAGAC
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1051   -   1101
RU05787        --> TTAATGACAGCCTCAGCACATTCCTTGTTGTATTTTTTCTCCTTCATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ............................................CATTGG
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> TTAATGACAGCCTCAGCACATTCCTTGTTGTATTTTTTCTCCTTCATTGG
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1101   -   1151
RU05787        --> ACATCTGATTTGAAAATCAGTCACATAGTCCCACCATACCCAAGGCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ACATCTGATTTGAAAATCAGTCACATAGTCCCACCATACCCAAGGCTTTT
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ACATCTGATTTGAAAATCAGTCACATAGTCCCACCATACCCAAGGCTTTC
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1151   -   1201
RU05787        --> GAGTCTCATTTGCTACTTTAAAAACACACAGCTGCCTTAAATTTTCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- GAGTCTCATTTGCTACTTTAAAAACACACAGCTGCCTTAAATTTTCAAGA
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> GAGTCTCATTAGCTACTTTAAAAACACACAGCTGCCTTAAATTTTCAAGA
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1201   -   1251
RU05787        --> ACCACCTGTTTCCCTTCGTAACCAGTGCTGAAGTCTTGTTCAGGGTCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ACCACATGTTTCCCTTCGTAACCAGTGCTGAAGTCTTGTTCAGGGTCAGG
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ACCACCTCTTTCCCTTCGTAACCAGTGCTGAAGTCTTGTTCAGGGTCAGG
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1251   -   1301
RU05787        --> AGCACAATATCTTCCATGATTGATACACTGAGATTTGCACTGTTTGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- AGCACAATATCTTCCATGATTGATACACTGAGATTTGC............
CT0106811      <-- AGCACAATATCTTCCATGATTGATACACTGAGATTTGCACTGTTTGCTCA
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> AGCACAATATCTTCCATGATTGATACACTGAGATTTGCACTGTTTGCTCA
CT0086811      --> ..................................................
CT0064479      --> .......................................CTGTTTGCTCA
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1301   -   1351
RU05787        --> AGGTGAATGCCTTAGGACAGTACCAAGTTATATAATGCGGTGTGAACTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- AGGTGAATGCCTTAGGACAGTACCAAGTTATATAATGCGGTGTGAACTGA
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> AGGTGAATGCCTTAGGACAGT.............................
CT0086811      --> ..................................................
CT0064479      --> AGGTGAATGCCTTGGGACAGTACCAAGTTATATAATGCGGTGTGAACTGA
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1351   -   1401
RU05787        --> GTGTAACCCCCTTTTTCAAGTATCTGGGCTGCACCCCTAAACTCCTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- GTGTAACCCCCTTTTTCAAGTATCTGGGCTGCACCCCTAAACTCCTTTGT
ET0089902      <-- ......aaCCCCTTTTCAAGTATCTGGGCTGCACCCCTAAACTCCTTTGT
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> GTGTAACCCCCTTTTTCAAGTATCTGGGCTGCACCCCTAAACTCCTTTGT
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1401   -   1451
RU05787        --> AAATTCCATCAACATGTCACACTTAACCCCACATTCATCATTACTGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- AAATTCCATCAACATGTCACACTTAACCCCACATTCATCATTACTGTTGG
ET0089902      <-- AAATTCCATCAACATGTCACACTTAACCCCACATTCATCATTACTGTTGG
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> AAATTCCATCAACATGTCACACTTAACCCCACATTCATCATTACTGTTGG
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1451   -   1501
RU05787        --> TCCATAGTTCATATTCCACACGATCATCTGGGTGAGGAACAGATTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- TCCATAGTTCATATTCCACACGATCATCTGGGT.................
ET0089902      <-- TCCATAGTTCATATTCCACACGATCATCTGGGTGAGGAACAGATTCTCTC
ET0005207      <-- .CCATAGTTCATATTCCACACGATCATCTGGGTGAGGAACAGATTCTCTC
CT0116037      <-- .......TTCATATTCCACACGATCATCTGGGTGAGGAACAGATTCTCTC
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> TCCATAGTTCATATT...................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1501   -   1551
RU05787        --> CAGTCAAGGTACACATTCACCATATCACCAGAACTGATGGCCTTCTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- CAGTCAAGGTACACATTCACCATATCACCAGAACTGATGGCCTTCTTCAA
ET0005207      <-- CAGTCAAGGTACACATTCACCATATCACCAGAACTGATGGCCTTCTTCAA
CT0116037      <-- CAGTCAAGGTACACATTCACCATATCACCAGAACTGATGGCCTTCTTCAA
ET0006937      <-- ............................tctgctTGATGGCCTTCTTCAA
ET0145670      <-- ..........................attctgctTGATGGCCTTCTTCAA
ET0146992      <-- ..........................attctgctTGATGGCCTTCTTCAA
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..........................attctgctTGATGGCCTTCTTCAA
ET0040206      --> ............................gctgagtggccgttcttacgAA
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1551   -   1601
RU05787        --> TGTTTGACCAAAACTTTTTTCAATGAGTGCAGATGGTATAGTTATGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................  Control
ET0128029      <-- ..................................................  Ethylene
ET0128421      <-- ..................................................  Ethylene
ET0023992      <-- ..................................................  Ethylene
ET0094022      <-- ..................................................  Ethylene
ET0138229      <-- ..................................................  Ethylene
CT0059990      <-- ..................................................  Control
CT0006897      <-- ..................................................  Control
ET0131373      <-- ..................................................  Ethylene
RH45BR156      <-- ..................................................  WaterDS
CT0093120      <-- ..................................................  Control
CT0106811      <-- ..................................................  Control
ET0089902      <-- TGTTTGACCAAAACTTTTTTCAATGAGTGCAGAT................  Ethylene
ET0005207      <-- TGTTTGACCAAAACTTTTTTCAATGAGTGCAGATGGTAT...........  Ethylene
CT0116037      <-- TGTTTGACCAAAACTTTTTTCAATGAGTGCAGATGGTATAGTTATGTTCT  Control
ET0006937      <-- TGTTTGACCAAAACTTTTTTCAATGAGTGCAGATGGTATAGTTATGTTTT  Ethylene
ET0145670      <-- TGTTTGACCAAAACTTTTTTCAATGAGTGCAGATGGTATAGTTATGTTTT  Ethylene
ET0146992      <-- TGTTTGACCAAAACTTTTTTCAATGAGTGCAGATGGTATAGTTATGTTTT  Ethylene
ET0133202      <-- .............................CAGATGGTATAGTTATGTTTT  Ethylene
ET0115893      <-- ..................................................  Ethylene
ET0067355      <-- ..................................................  Ethylene
CT0104438      --> ..................................................  Control
CT0033850      --> ..................................................  Control
CT0042646      --> ..................................................  Control
CT0045150      --> ..................................................  Control
CT0048320      --> ..................................................  Control
ET0015438      --> ..................................................  Ethylene
CT0045723      --> ..................................................  Control
ET0084521      --> ..................................................  Ethylene
ET0022920      --> ..................................................  Ethylene
ET0109851      --> ..................................................  Ethylene
ET0012265      --> ..................................................  Ethylene
ET0032488      --> ..................................................  Ethylene
CT0023881      --> ..................................................  Control
RH20R114       --> ..................................................  WaterDS
CT0086811      --> ..................................................  Control
CT0064479      --> ..................................................  Control
CT0041653      --> TGTTTGACCAAAACTTTTTTCAATGAGTGCAGATGGTATAGTTATGTTCT  Control
ET0040206      --> TGTTTGACCAAAACTTTTTTCAATGAGTGCAGATGGTATAGTTATGTTTT  Ethylene
RH49BP25       --> ..................................................  WaterDS
CT0019966      --> ..................................................  Control
ET0101872      --> ..................................................  Ethylene

               1601   -   1651
RU05787        --> CAATGTATTTAGCAGTTGAAATATCTTCTTCTGGTGTGTCCATAGTTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................  Control
ET0128029      <-- ..................................................  Ethylene
ET0128421      <-- ..................................................  Ethylene
ET0023992      <-- ..................................................  Ethylene
ET0094022      <-- ..................................................  Ethylene
ET0138229      <-- ..................................................  Ethylene
CT0059990      <-- ..................................................  Control
CT0006897      <-- ..................................................  Control
ET0131373      <-- ..................................................  Ethylene
RH45BR156      <-- ..................................................  WaterDS
CT0093120      <-- ..................................................  Control
CT0106811      <-- ..................................................  Control
ET0089902      <-- ..................................................  Ethylene
ET0005207      <-- ..................................................  Ethylene
CT0116037      <-- CAATGTATTTAGCAGTTGAAATATCTTCTTCTGGTGTGTCCATAGTTATT  Control
ET0006937      <-- CAATGTATTTGGCAGTTGAAATATCTTCTTCTGGTGTGTCCATAGTTATT  Ethylene
ET0145670      <-- CAATGTATTTGGCAGTTGAAATATCTTCTTCTGGTGTGTCCATAGTTATT  Ethylene
ET0146992      <-- CAATGTATTTGGCAGTTGAAATATCTTCTTCTGGTGTGTCCATAGTTATT  Ethylene
ET0133202      <-- CAATGTATTTGGCAGTTGAAATATCTTCTTCTGGTGTGTCCATAGTTATT  Ethylene
ET0115893      <-- ..................................................  Ethylene
ET0067355      <-- ..................................................  Ethylene
CT0104438      --> ..................................................  Control
CT0033850      --> ..................................................  Control
CT0042646      --> ..................................................  Control
CT0045150      --> ..................................................  Control
CT0048320      --> ..................................................  Control
ET0015438      --> ..................................................  Ethylene
CT0045723      --> ..................................................  Control
ET0084521      --> ..................................................  Ethylene
ET0022920      --> ..................................................  Ethylene
ET0109851      --> ..................................................  Ethylene
ET0012265      --> ..................................................  Ethylene
ET0032488      --> ..................................................  Ethylene
CT0023881      --> ..................................................  Control
RH20R114       --> ..................................................  WaterDS
CT0086811      --> ..................................................  Control
CT0064479      --> ..................................................  Control
CT0041653      --> CAATGTATTTAGCAGTTGAAATATCTTCTTCTGGTGTGTCCATAGTTATT  Control
ET0040206      --> CAATGTATTTGGCAGTTGAAATATCTTCTTCTGGTGTGTCCATAGTTATT  Ethylene
RH49BP25       --> ..................................................  WaterDS
CT0019966      --> ..................................................  Control
ET0101872      --> ..................................................  Ethylene

               1651   -   1701
RU05787        --> AACGCCTCCTCAATATCATCAGCGACAAGGACTGCAGAAGCTCCAGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- AACGCCTCCTCAATATCATCAGCGACAAGGACT.................
ET0006937      <-- AGCGCCTCCTCAATATCATCAGCGACAAGGACTGCAGAAGCTCCAGCCTT
ET0145670      <-- AACGCCTCCTCAATATCATCAGCGACAAGGACTGCAGAAGCTCCAGCCTT
ET0146992      <-- AACGCCTCCTCAATATCATCAGCGACAAGGACTGCAGAAGCTCCAGCCTT
ET0133202      <-- AACGCCTCCTCAATATCATCAGGGACAAGGACTGCAGAAGCTCCAGCCTT
ET0115893      <-- ..........CAATATCATCAGCGACAAGGACTGCAGAAGCTCCAGCCTT
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> AACGCCTCCTCAATATCATCAGCGACAAGGACTGCAGAAGCTCCGGCCTT
ET0040206      --> AACGCCTCCTCAATATCATCAGCGACAAGGACTGCAGAAGCTCCAGCCTT
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1701   -   1751
RU05787        --> CTGGGCATTCCAAACCTTCA-GGCAAAGAAGCAATCTCCACGATCGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- CTGGGCAT..........................................
ET0145670      <-- CTGGGCATTCCAAACCTTCAAGGCAAAGAAGCAATCTCCACGATCGACCA
ET0146992      <-- CTGGGCATTCCAAACCTTCAAGGCAAAGAAGCAATCTCCACGATCGACCA
ET0133202      <-- CTGGGCATTCCAAACCTTCAAGGCAAAGAAGCAATCTCCACGATCGACCA
ET0115893      <-- CTGGGCATTCCAAACCTTCAAGGCAAAGAAGCAATCTCCACGATCGACCA
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> CTGGGCATTCCAAACCTTCA-GGCAAAGAAGCAATCTCCACGATCGACCA
ET0040206      --> CTGGGCATTCCAAACCTTCAAGGCAAAGAAGCAATCTCCACGATCGACCA
RH49BP25       --> ..................................................
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1751   -   1801
RU05787        --> ACAGAAACGTCGGCAGAGCTCCGGGATCGGATTTGTACGAAAGCCCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ACAGAAACGTCGGCAGAGCTCCGGGATCGGATTTGTACGAAAGCCCAAAC
ET0146992      <-- ACAGAAACGTCGGCAGAGCTCCGGGATCGGATTTGTACGAAAGCCCAAAC
ET0133202      <-- ACAGAAACGTCGGCAGAGCTCCGGGATCGGATTTGTACGAAAGCCCAAAC
ET0115893      <-- ACAGAAACGTCGGCAGAGCTCCGGGATCGGATTTGTACGAAAGCCCAAAC
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ACAGAAACGTCGG.....................................
ET0040206      --> ACAGAAACGTCGGCAGAc................................
RH49BP25       --> ....................................ACGAAAGCCCAAAC
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               1801   -   1851
RU05787        --> TCCGAGAACTCCTTACACCCCTTCTGATTCTCCTTTGGATATATAACACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- TCCGAGAACTCCTTACACCCCTTCTGATTCTCCT................
ET0146992      <-- TCCGAGAACTCCTTACACCCCTTCTGATTCTCCT................
ET0133202      <-- TCCGAGAACTCCTTACACCCCTTCTG........................
ET0115893      <-- TCCGAGAACTCCTTACACCCCTTCTGATTCTCCTTTGGATATATAACACC
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> TCCGAGAACTCCTTACACCCCTTCTGATTCTCCTTTGGATATATAACACC
CT0019966      --> .............................................caACC
ET0101872      --> ..................................................

               1851   -   1901
RU05787        --> CCCAGACATGCTCCCTCCATACTGAGGAAGCCCAAAGTTGCCAATGGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- CCCAGACATGCTCCCTCCATACTGAGGAAGCCCAAAGTTGCCAATGGCAC
ET0067355      <-- ..................................................
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> CCCAGACATGCTCCCTCCATACTGAGGAAGCCCAAAGTTGCCAATGGCAC
CT0019966      --> CCCAGACATGCTCCCTCCATACTGAGGAAGCCCAAAGTTGCCAATGGCAC
ET0101872      --> .....................actgGGAAGCCCAAAGTTGCCAATGGCAC

               1901   -   1951
RU05787        --> TGTCATATTTCCCCTTGATTTTATCCGGTGACGTCACCCTCAAGCTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- TGTC..............................................
ET0067355      <-- ............................TGACGTCACCCTCAAGCTGTTC
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> TGTCATATTTCCCCTTGATTTTATCCGGTGACGTCACCCTCAAGCTGTTC
CT0019966      --> TGTCATATTTCCCCTTGATTTTATCCGGTGACGTCACCCTCAAGCTGTTC
ET0101872      --> TGTCATATTTCCCCTTGATTTTATCCGGTGACGTCACCCTCAAGCTGTTC

               1951   -   2001
RU05787        --> TTCTCCACCACGAACCTCCCCATCGAAAAAGGCGCCATCGTCAGCACCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- TTCTCCACCACGAACCTCCCCATCGAAAAAGGCGCCATCGTCAGCACCAG
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> TTCTCCACCACGAACCTCCCCATCGAAAAAGGCGCCATCGTCAGCACCAG
CT0019966      --> TTCTCCACCACGAACCTCCCCATCGAAAAAGGCGCCATCGTCAGCACCAG
ET0101872      --> TTCTCCACCACGAACCTCCCCATCGAAAAAGGCGCCATCGTCAGCACCAG

               2001   -   2051
RU05787        --> AAACCCTAGAAAGAGTCCCAAAGCTGATCTCTGAAGCTCCATATCTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- AAACCCTAGAAAGAGTCCCAAAGCTGATCTCTGAAGCTCCATATCTCACA
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> AAACCCTAGAAAGAGTCCCAAAGCTGATCTCTGAAGCTCCATATCTCACA
CT0019966      --> AAACCCTAGAAAGAGTCCCAAAGCTGATCTCTGAAGCTCCATATCTCACA
ET0101872      --> AAACCCTAGAAAGAGTCCCAAAGCTGATCTCTGAAGCTCCATATCTCACA

               2051   -   2101
RU05787        --> AATTCAAAAAAAAAAAAAA-GATGGGGTTTTGATGTGAAATTCGAGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- AATTCAAAAAAAAAAAAAAAGATGGGGTTTTGATGTGAAATTCGAGAAAC
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> AATTCAAAAAAAAAAAAAA-GATGGGGTTTTGATGTGAAATTCGAGAAAC
CT0019966      --> AAT...............................................
ET0101872      --> AATT--ACAAAAAAAAAAA-GATGGGGTTTTGATGTGAAATTCGAGAAAC

               2101   -   2151
RU05787        --> CCAGAA-CGAAAAAGATGAG-CCCTTTTTTTTTGGTTCTCTTCACATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- CCAGAA-CGAAAAAGATGAG-CCCTTTTTTTTTGGTTCTCTTCACATAAT
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> CCAGAA-CGAAAAAGATGAG-CCCTTTTTTTTTGGTTCTCTTCACATAAT
CT0019966      --> ..................................................
ET0101872      --> CCAGAAACGAAAAAGATGAGTCCCTTTTTTT...................

               2151   -   2201
RU05787        --> AGCTTGGTGGGGTTGTGATTTTGGTTCTGCAAAACCTACAAAGAACGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- ..................................................
ET0128029      <-- ..................................................
ET0128421      <-- ..................................................
ET0023992      <-- ..................................................
ET0094022      <-- ..................................................
ET0138229      <-- ..................................................
CT0059990      <-- ..................................................
CT0006897      <-- ..................................................
ET0131373      <-- ..................................................
RH45BR156      <-- ..................................................
CT0093120      <-- ..................................................
CT0106811      <-- ..................................................
ET0089902      <-- ..................................................
ET0005207      <-- ..................................................
CT0116037      <-- ..................................................
ET0006937      <-- ..................................................
ET0145670      <-- ..................................................
ET0146992      <-- ..................................................
ET0133202      <-- ..................................................
ET0115893      <-- ..................................................
ET0067355      <-- AGCTTGGTGGGGTTGTGATTTTGGTTCTGCAAAACCTACAAAGAACGAAG
CT0104438      --> ..................................................
CT0033850      --> ..................................................
CT0042646      --> ..................................................
CT0045150      --> ..................................................
CT0048320      --> ..................................................
ET0015438      --> ..................................................
CT0045723      --> ..................................................
ET0084521      --> ..................................................
ET0022920      --> ..................................................
ET0109851      --> ..................................................
ET0012265      --> ..................................................
ET0032488      --> ..................................................
CT0023881      --> ..................................................
RH20R114       --> ..................................................
CT0086811      --> ..................................................
CT0064479      --> ..................................................
CT0041653      --> ..................................................
ET0040206      --> ..................................................
RH49BP25       --> AGCTTGGTGGGGTTGTGATTTTGGTTCTGCAAAACCTACAAAGAACGAAG
CT0019966      --> ..................................................
ET0101872      --> ..................................................

               2201   -   2251
RU05787        --> CTTTCTGTTAAACAAGTGTGGTTTCTTTTTGGAGACGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0052510      <-- .......................................
ET0128029      <-- .......................................
ET0128421      <-- .......................................
ET0023992      <-- .......................................
ET0094022      <-- .......................................
ET0138229      <-- .......................................
CT0059990      <-- .......................................
CT0006897      <-- .......................................
ET0131373      <-- .......................................
RH45BR156      <-- .......................................
CT0093120      <-- .......................................
CT0106811      <-- .......................................
ET0089902      <-- .......................................
ET0005207      <-- .......................................
CT0116037      <-- .......................................
ET0006937      <-- .......................................
ET0145670      <-- .......................................
ET0146992      <-- .......................................
ET0133202      <-- .......................................
ET0115893      <-- .......................................
ET0067355      <-- CTTTCTG................................
CT0104438      --> .......................................
CT0033850      --> .......................................
CT0042646      --> .......................................
CT0045150      --> .......................................
CT0048320      --> .......................................
ET0015438      --> .......................................
CT0045723      --> .......................................
ET0084521      --> .......................................
ET0022920      --> .......................................
ET0109851      --> .......................................
ET0012265      --> .......................................
ET0032488      --> .......................................
CT0023881      --> .......................................
RH20R114       --> .......................................
CT0086811      --> .......................................
CT0064479      --> .......................................
CT0041653      --> .......................................
ET0040206      --> .......................................
RH49BP25       --> CTTTCTGTTAAACAAGTGTGGTTTCTTTTTGGAGACGAA
CT0019966      --> .......................................
ET0101872      --> .......................................