SNPs of unigene RU05942
               1      -     51
RU05942        --> gcTTCTACTTGTTTCTCTAAATAAAAGGCGGCTGCGCTTCCTCCA-TCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ................CTAAATAAGAGGCGGCTGCGCTTCCTCCA-TCAA
CT0074391      <-- ..................................................
ET0124967      --> ctTTCTACTTGTTTCTCTAAATAAGAGGCGGCTGCGCTTCCTCCAATCAA
CT0012144      --> ..................................................
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> ..................................................
ET0120665      --> ..................................................
CT0089972      --> ..................................................

               51     -    101
RU05942        --> TCAATCATCGTCTTCTTCTTCTTCTTCTTCAGAGACAAAAGAGAATGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- TCAATCATCGTCTTCTTCTTCTTCT---TCAGAGACAAAAGAGAATGTCT
CT0074391      <-- ..................................................
ET0124967      --> TCAATCATCGTCTTCTTCTTCTTCTTC---AGAGACAAAAGAGAATGTCT
CT0012144      --> ..................................................
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> ..................................................
ET0120665      --> ..................................................
CT0089972      --> ..................................................

               101    -    151
RU05942        --> GGAGGAATCGCGCGTGGTCGCCTCGCAGAGGAACGAAAATCCTGGCGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- GGAGGAATCGAGCGTGGTCGCCTCGCAGAGGAACGAAAATCCTGGCGTAA
CT0074391      <-- ..................................................
ET0124967      --> GGAGGAATCGCGCGTGGTCGCCTCGCAGAGGAACGAAAATCCTGGCGTAA
CT0012144      --> ..................................................
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> ..................................................
ET0120665      --> ..................................................
CT0089972      --> ..................................................

               151    -    201
RU05942        --> GAATCACCCCCATGGTTTTGTGGCGAAGCCAGAGACAGGTGCAGATGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- GAATCACCCCCATGGTTTTGTGGCGAAGCCAGAGACAGGTGCAGATGGCT
CT0074391      <-- ..................................................
ET0124967      --> GAATCACCCCCATGGTTTTGTGGCGAAGCCAGAGACAGGTGCAGATGGCT
CT0012144      --> ..................................................
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> ..................................................
ET0120665      --> ..................................................
CT0089972      --> ..................................................

               201    -    251
RU05942        --> CCGTCAATTTGATGGTTTGGCAGTGCTTAATCCCTGGAAAACCCGCTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- CCGTCA............................................
CT0074391      <-- ..................................................
ET0124967      --> CCGTCAATTTGATGGTTTGGCAGTGCTTAATCCCTGGAAAACCCGCTA..
CT0012144      --> ........................GCTTAATCCCTGGAAAACCCGCTACT
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> ..................................................
ET0120665      --> ..................................................
CT0089972      --> ..................................................

               251    -    301
RU05942        --> GATTGGGAGGGTGGCAACTATCCACTTACACTCCAGTTCAGTGAGGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- ..................................................
ET0124967      --> ..................................................
CT0012144      --> GATTGGGAGGGTGGCAACTATCCACTTACACTCCAGTTCAGTGAGGATTA
CT0030292      --> ........................................GTGAGGATTA
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> ..................................................
ET0120665      --> ..................................................
CT0089972      --> ..................................................

               301    -    351
RU05942        --> CCCCAGCAAACCCCCAAAGTGCAAGTTCCCTCAGGGTTTTTTCCACCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- ..................................................
ET0124967      --> ..................................................
CT0012144      --> CCCCAGCAAACCCCCAAAGTGCAAGTTCCCTCAGGGTTTTTTCCACCCTA
CT0030292      --> CCCCAGCAAACCCCCAAAGTGCAAGTTCCCTCAGGGTTTTTTCCACCCTA
CT0020172      --> ....................................TTTTTTCCACCCTA
CT0025028      --> ....................................TTTTTTCCACCCTA
CT0030883      --> ....................................TTTTTTCCACCCTA
CT0101439      --> .............................................CCCTA
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> ..................................................
ET0120665      --> ..................................................
CT0089972      --> ..................................................

               351    -    401
RU05942        --> ATGTTTATCCTTCTGGAACCGTTTGCCTTTCAATTCTCAATGAGGATAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- ..................................................
ET0124967      --> ..................................................
CT0012144      --> ATGTTTATCCTTCTGGAACCGTT...........................
CT0030292      --> ATGTTTATCCTTCTGGAACCGTTTGCCTTTCAATTCTCAATGAGGATAAG
CT0020172      --> ATGTTTATCCTTCTGGAACCGTTTGCCTTTCAATTCTCAATGAGGATAAG
CT0025028      --> ATGTTTATCCTTCTGGAACCGTTTGCCTTTCAATTCTCAATGAGGATAAG
CT0030883      --> ATGTTTATCCTTCTGGAACCGTTTGCCTTTCAATTCTCAATGAGGATAAG
CT0101439      --> ATGTTTATCCTTCTGGAACCGTTTGCCTTTCAATTCTCAATGAGGATAAG
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> ..................................................
ET0120665      --> ..................................................
CT0089972      --> ..................................................

               401    -    451
RU05942        --> GGGTGGAGGCCTGCCATTACTGTGAAGCAAATCCTAGTAGGCATTCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- ..................................................
ET0124967      --> ..................................................
CT0012144      --> ..................................................
CT0030292      --> GGGTGGAGGCCTGCCATTACTGTGAAGCAAATCCTAGTAGGCATTCAGGA
CT0020172      --> GGGTGGAGGCCTGCCATTACTGTGAAGCAAATCCTAGTAGGCATTCAGGA
CT0025028      --> GGGTGGAGGCCTGCCATTACTGTGAAGCAAATCCTAGTAGGCATTCAGGA
CT0030883      --> GGGTGGAGGCCTGCCATTACTGTGAAGCAAATCCTAGTAGGCATTCAGGA
CT0101439      --> GGGTGGAGGCCTGCCATTACTGTGAAGCAAATCCTAGTAGGCATTCAGGA
ET0136439      --> ................................................GA
ET0137137      --> ................................................GA
ET0137999      --> ................................................GA
ET0138306      --> ................................................GA
ET0140229      --> ................................................GA
ET0140760      --> ................................................GA
ET0140956      --> ................................................GA
ET0140962      --> ................................................GA
ET0131416      --> .........................................gtacttttg
ET0137557      --> .......................................agaacttagac
ET0139511      --> .......................................agaactttaga
ET0084602      --> ..................................................
ET0146673      --> ..................................................
ET0120665      --> ..................................................
CT0089972      --> ..................................................

               451    -    501
RU05942        --> CTTGCTAGACCAGCCTAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................  Control
CT0074391      <-- ..................................................  Control
ET0124967      --> ..................................................  Ethylene
CT0012144      --> ..................................................  Control
CT0030292      --> CTTGCTAGACCAGCCTAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Control
CT0020172      --> CTTGCTAGACCAGCCTAA--CCC-T-GCTGATCCT...............  Control
CT0025028      --> CTTGCTAGACCAGCCTAA--CCC-T-GCTGATCCT...............  Control
CT0030883      --> CTTGCTAGACCAGCCTAA--CCC-T-GCTGATCCT...............  Control
CT0101439      --> CTTGCTAGACCAGCCTAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Control
ET0136439      --> CTTGCTAGACCAGCCAAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0137137      --> CTTGCTAGACCAGCCAAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0137999      --> CTTGCTAGACCAGCCAAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0138306      --> CTTGCTAGACCAGCCAAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0140229      --> CTTGCTAGACCAGCCAAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0140760      --> CTTGCTAGACCAGCCAAA--CCCCT-GCTGATCCTGCACAAACTGAGGGG  Ethylene
ET0140956      --> CTTGCTAGACCAGCCAAAACCCC-T-GCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0140962      --> CTTGCTAGACCAGCCAAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0131416      --> tcttagtacctAGCCAAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0137557      --> taagaaccaagaccaaAA--CCC-TAGCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0139511      --> ctaagaaccagaccaaAA--CCC-T-GCTGATCCTGCACAAACTGAGGG-  Ethylene
ET0084602      --> .....................................ACAAACTGAGGG-  Ethylene
ET0146673      --> ..................................................  Ethylene
ET0120665      --> ..................................................  Ethylene
CT0089972      --> ..................................................  Control

               501    -    551
RU05942        --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- ..................................................
ET0124967      --> ..................................................
CT0012144      --> ..................................................
CT0030292      --> TTATCAGCTCTTCtcctgtactcaactggt....................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> TTATCAGCTCTTCAT...................................
ET0136439      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0137137      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0137999      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0138306      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0140229      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0140760      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0140956      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0140962      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0131416      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0137557      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0139511      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0084602      --> TTATCAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0146673      --> ....CAGCTCTTCATCCAGGAACCAGTTGAGTACAGGAGAAGAGTGCGGC
ET0120665      --> ................................................GC
CT0089972      --> ..................................................

               551    -    601
RU05942        --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- ..................................................
ET0124967      --> ..................................................
CT0012144      --> ..................................................
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0137137      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0137999      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0138306      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0140229      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0140760      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTTTGTTAAC
ET0140956      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0140962      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0131416      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0137557      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0139511      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0084602      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTT...
ET0146673      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
ET0120665      --> AGCAGGCAAAGCAATATCCATCTGTTATCTGACGAGTGCTTTT-GTTAAC
CT0089972      --> ......................................tttagttaaact

               601    -    651
RU05942        --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- ..................................................
ET0124967      --> ..................................................
CT0012144      --> ..................................................
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0137137      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0137999      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0138306      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0140229      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0140760      --> TCATTTGTTTAGTTAAAACAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0140956      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0140962      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0131416      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0137557      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0139511      --> TCATT-GTTTAGTTAAAACAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0084602      --> ..................................................
ET0146673      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
ET0120665      --> TCATT-GTTTAGTTAAA-CAAAATCATGCTCAAGGCTCTTCTCAAGACTT
CT0089972      --> aCATT-GTTTAGTTAAAACAAAATCATGCTCAAGGCTCTTCTCAAGACTT

               651    -    701
RU05942        --> GACCAACCTTCTAAGTGGGTTCCTTGC-ATTTTTTTCTCTCTCTTTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- ....................TCCTTGC-ATTTTTTTCTCTCTCTTTGTTT
ET0124967      --> ..................................................
CT0012144      --> ..................................................
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> GACCAACCTTCTAAGTGGGTTCCTTGCTATTTTTTTCctctt........
ET0137137      --> GACCAACCTTCTAAGTGGGTTCCTTGC.......................
ET0137999      --> GACCAACCTTCTAAGTGGGT..............................
ET0138306      --> GACCAACCTTCTAAGTGGGTTCCTTGCTATTTTTTTCctctt........
ET0140229      --> GACCAACCTTCTAAGTGGGTTCCTTGC-ATTTTTTTCctcttc.......
ET0140760      --> GACCAACCTTCTAAGTGGGTTCCTGCT-ATTTTTTTCctct.........
ET0140956      --> GACCAACCTTCTAAGTGGGTTCCTTGCTATTTTTTTCTCTC.........
ET0140962      --> GACCAACCTTCTAAGTGGGTTCCTGCT-ATTTTTTTCctctt........
ET0131416      --> GACCAACCTTCTAAGTGGGT..............................
ET0137557      --> GACCAACCTTCTAAGTGGGTTCCT..........................
ET0139511      --> GACCAACCTTCTAAGTGG................................
ET0084602      --> ..................................................
ET0146673      --> GACCAACCTTCTAAGTGGGTTCCTTGC-ATTTTTTTCTCTCTCTTTGTTT
ET0120665      --> GACCAACCTTCTAAGTGGGTTCCTTGC-ATTTTTTTCTCTCTCTTTGTTT
CT0089972      --> GACCAACCTTCTAAGTGGGTTCCTTGC-ATTTTTTTCTCTCTCTTTGTTT

               701    -    751
RU05942        --> ATGGTTGTGTGTATCGTAGTTATTCTCATTCTCATTTGTGACAATACTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- ATGGTTGTGTGTATCGTAGTTATTCTCATTCTCATTTGTGACAATACTAA
ET0124967      --> ..................................................
CT0012144      --> ..................................................
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> ATGGTTGTGTGTATCGTAGTTATTCTCATTCTCATTTGTGACAATACTAA
ET0120665      --> ATGGTTGTGTGTATCGTAGTTATTCTCATTCTCATTTGTGACAATACTAA
CT0089972      --> ATGGTTGTGTGTATCGTAGTTATTCTCATTCTCATTTGTGACAATACTAA

               751    -    801
RU05942        --> AATTCGCTGACAGTAGAGGCTGTTATGCACAAACTTCAAACTCCTAACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- ..................................................
CT0074391      <-- AATTCGCTGACAGTAGAGGCTGTTATGCACAAACTTCAAACTCCTAACCT
ET0124967      --> ..................................................
CT0012144      --> ..................................................
CT0030292      --> ..................................................
CT0020172      --> ..................................................
CT0025028      --> ..................................................
CT0030883      --> ..................................................
CT0101439      --> ..................................................
ET0136439      --> ..................................................
ET0137137      --> ..................................................
ET0137999      --> ..................................................
ET0138306      --> ..................................................
ET0140229      --> ..................................................
ET0140760      --> ..................................................
ET0140956      --> ..................................................
ET0140962      --> ..................................................
ET0131416      --> ..................................................
ET0137557      --> ..................................................
ET0139511      --> ..................................................
ET0084602      --> ..................................................
ET0146673      --> AATTCGCTGACAGTAGAGGCTGTTATGCACAAACTTCAAACTCCT.....
ET0120665      --> AATTCGCTGACAGTAGAGGCTGTTATGCACAAACTTCAAACT........
CT0089972      --> AATTCGCTGACAGTAGAGGCTGTTATGCACAAACTTCAAACTCCT.....

               801    -    851
RU05942        --> TGGCGTGACTTTGTTCTGGTTTTCTTATCATTGCTTGATTTTCATTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048363      <-- .................................................
CT0074391      <-- TGGCGTGACTTTGTTCTGGTTTTCTTATCATTGCTTGATTTTCATTTGC
ET0124967      --> .................................................
CT0012144      --> .................................................
CT0030292      --> .................................................
CT0020172      --> .................................................
CT0025028      --> .................................................
CT0030883      --> .................................................
CT0101439      --> .................................................
ET0136439      --> .................................................
ET0137137      --> .................................................
ET0137999      --> .................................................
ET0138306      --> .................................................
ET0140229      --> .................................................
ET0140760      --> .................................................
ET0140956      --> .................................................
ET0140962      --> .................................................
ET0131416      --> .................................................
ET0137557      --> .................................................
ET0139511      --> .................................................
ET0084602      --> .................................................
ET0146673      --> .................................................
ET0120665      --> .................................................
CT0089972      --> .................................................