SNPs of unigene RU06019
               0      -     50
RU06019        --> .ATGAAAACATGCTGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ....AAAACATGATGAAAAAT-AAA-TATCAATATACTTCGGTTGGTTT-
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> .ATGAAAACATGATGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
CT0120139      --> .ATGAAAACATGATGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
CT0120150      --> .ATGAAAACATGATGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
CT0121136      --> .ATGAAAACATGATGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
CT0121198      --> .ATGAAAACATGATGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
CT0121581      --> .ATGAAAACATGATGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
CT0122128      --> .ATGAAAACATGATGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
CT0122677      --> .ATGAAAACATGATGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
CT0123239      --> .ATGAAAACATGATGAAAA-T-AAAATATCAATATACTTCGGTTGGTTTT
CT0124846      --> .ATGAAAACATGATGAAAA-T-AAA-TATCAATATACTTCGGTTGGTTT-
CT0120140      --> atgaAAAACATGATGAAAAATAAAA-TATCAATATACTTCGGTTGGTTT-
CT0070886      --> ............................TCAATATACTTCGGTTGGTTT-
ET0034224      --> ............................TCAATATACTTCGGTTGGTTT-
ET0035477      --> ............................TCAATATACTTCGGTTGGTTT-
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               50     -    100
RU06019        --> CGATACACATAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- CG................................................
ET0110367      <-- .............ACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0120139      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0120150      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0121136      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0121198      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0121581      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0122128      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0122677      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0123239      --> CGATACACAGAAGACAGCACTGGCCAACCCAAAACATCCCAACAAAATCA
CT0124846      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0120140      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
CT0070886      --> CGATACACATAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
ET0034224      --> CGATACACAGAAGACAGCACTGGCCAACCCAGA-CATCCCAACAAAATCA
ET0035477      --> CGATACACAGAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
ET0057562      --> ........ATAAGACAGCACTGGCCAACCCAAA-CATCCCAACAAAATCA
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               100    -    150
RU06019        --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0120139      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0120150      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0121136      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0121198      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0121581      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0122128      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0122677      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0123239      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0124846      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0120140      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
CT0070886      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
ET0034224      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
ET0035477      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
ET0057562      --> ATAAAATCGATTCACTCGGAGGTAATGAACAATGATTTTCCCCAACACTA
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               150    -    200
RU06019        --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0120139      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0120150      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0121136      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0121198      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0121581      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0122128      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0122677      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0123239      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0124846      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0120140      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
CT0070886      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
ET0034224      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
ET0035477      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
ET0057562      --> GCAAGGCTGAATATCAAACACTGAACTCTCGAGAAACAGGACACCTACAG
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               200    -    250
RU06019        --> AAGCTCATCTAT-G-CAAATTGATCGTCACTACTGCTGCTTGCACTCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- AAGCTCATCTAT-G-CAAATTGATCGTCACTACTGCTGCTTGCACTCTGG
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0120139      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0120150      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0121136      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0121198      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0121581      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0122128      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0122677      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0123239      --> AAACTCATCTATAG-CAAATCGATCGTCACTACTGCTG............
CT0124846      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0120140      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTG........
CT0070886      --> AAGCTCATCTAT-GACAAATTGATCGTCACTACTGCTGCTTGCACTCgta
ET0034224      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTGCACTCTag
ET0035477      --> AAACTCATCTAT-G-CAAATCGATCGTCACTACTGCTGCTTGCACT....
ET0057562      --> AAGCTCATCTAT-G-CAAATTGATCGTCACTACTGCTGCTTGCACTCTGG
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               250    -    300
RU06019        --> AGGACGCTCGCCACCTTCTGCTCCTTGTGCCTTACCACTTTTCTTAGCtc
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- AGGACGCTCGCCACCTTCTGCTCCTTGTGCCTTACCACTTTTCTTAGC..
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> gg................................................
ET0034224      --> g.................................................
ET0035477      --> ..................................................
ET0057562      --> AGGACGCTCGCCACCTTCTGCTCCTTGTGCCTTACCACTTTTCTTA....
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               300    -    350
RU06019        --> cagcagatggctttttccttcctttctcttCCTCTTCCTCATCATCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..............................CCTCTTCCTCATCATCATCA
ET0115957      --> ..............................CCTCTTCCTCATCATCATCA
ET0117779      --> ..............................CCTCTTCCTCATCATCATCA
ET0122586      --> ..............................CCTCTTCCTCATCATCATCA
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               350    -    400
RU06019        --> TCATCATCCTCATCATCTTCTTCATCTTCATCTTCATCTTCGTCCTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- .......................................cgtTCCTCGTC
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> TCATCATCCTCATCATCTTCTTCATCTTCATCTTCATCTTCGTCCTCGTC
ET0115957      --> TCATCATCCTCATCATCTTCTTCATCTTCATCTTCATCTTCGTCCTCGTC
ET0117779      --> TCATCATCCTCATCATCTTCTTCATCTTCATCTTCATCTTCGTCCTCGTC
ET0122586      --> TCATCATCCTCATCATCTTCTTCATCTTCATCTTCATCTTCGTCCTCGTC
CT0110899      --> .....................TCATCTTCATCTTCATCTTCGTCCTCGTC
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               400    -    450
RU06019        --> TTCGTCTTCATTCTCATCTACATCATCATCATCATCTTCTATATCTTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- TTCGTCTTCATTCTCATCTACATCATCATCATCATCTTCTATATCTTCGA
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> TTCGTCTTCATTCTCATCTACATCATCATCATCATCGTCTATATCTTCAA
ET0115957      --> TTCGTCTTCATTCTCATCTACATCATCATCATCATCGTCTATATCTTCAA
ET0117779      --> TTCGTCTTCATTCTCATCTACATCATCATCATCATCGTCTATATCTTCAA
ET0122586      --> TTCGTCTTCATTCTCATCTACATCATCATCATCATCGTCTATATCTTCAA
CT0110899      --> TTCGTCTTCATTCTCATCTACATCATCATCATCATCTTCTATATCTTCAA
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               450    -    500
RU06019        --> ATTCATCCTTAACAGCC-TCCCCAGTAAACCATGACACCGCATGGGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ATTCATCCTTAACAGCC-TCCCCAGTAAACCATGACACCGCATGGGGAAT
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ATTCATCCTTAACAGCCCTCCCCAGTAAACCATGACACCGCATGGGGAAT
ET0115957      --> ATTCATCCTTAACAGCCCTCCCCAGTAAACCATGACACCGCATGGGGAAT
ET0117779      --> ATTCATCCTTAACAGCC-TCCCCAGTAAACCATGACACCGCATGGGGAAT
ET0122586      --> ATTCATCCTTAACAGCCCTCCCCAGTAAACCATGACACCGCATGGGGAAT
CT0110899      --> ATTCATCCTTAACAGCC-TCCCCAGTAAACCATGACACCGCATGGGGAAT
ET0013415      --> ................................TGACACCGCATGGGGAAT
CT0072824      --> ..................................................

               500    -    550
RU06019        --> G-ATTTTGTCTCTTATTGTTGAACCAATGTCATAATCCTGCTCCATCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- G-ATTTTGTCTCTTATTGTTGAACCAATGTCATAATCCTGCTCCATCTGA
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> GTATTTTGTCTCTTATTGTTGAACCAATG.....................
ET0115957      --> G-ATTTTGTCTCTTATTGTTGAACCAATG.....................
ET0117779      --> G-ATTTTGTCTCTTATTGTTGAACCAATGT....................
ET0122586      --> G-ATTTTGTCTCTTATTGTTGAACCAATGT....................
CT0110899      --> G-ATTTTGTCTCTTATTGTTGAACCAATGTCATAATCCTGCTCCATCTGA
ET0013415      --> G-ATTTTGTCTCTTATTGTTGAACCAATGTCATAATCCTGCTCCATCTGA
CT0072824      --> ..................................................

               550    -    600
RU06019        --> CCTTGAAGTTCTTCAGCAGCTTCCTCGTCAAATCCATCATCAGTATCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- CCTTGAAGTTCTTCAGCAGCTTCCTCGTCAAATCCATCATCAGTATCAGG
CT0020384      <-- ......................................ATCAGTATCAGG
CT0028925      <-- ......................................ATCAGTATCAGG
CT0050555      <-- ......................................ATCAGTATCAGG
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> CCTTGAAGTTCTTCAGCAGTTTCCTCATCAAATCCATCA...........
ET0013415      --> CCTTGAAGTTCTTCAGCAGCTTCCTCGTCAAATCCATCATCAGTATCAGG
CT0072824      --> ..................................................

               600    -    650
RU06019        --> GATCTCAGGAGGGTTGAAGAAGTTAAAGAAGCTTTCACAATCTTCAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- -ATCTCAaggaagggtt.................................
CT0020384      <-- GATCTCAGGAGGGTTGAAGAAGTTAAAGAAGCTTTCACAATCTTCAGTTT
CT0028925      <-- GATCTCAGGAGGGTTGAAGAAGTTAAAGAAGCTTTCACAATCTTCAGTTT
CT0050555      <-- GATCTCAGGAGGGTTGAAGAAGTTAAAGAAGCTTTCACAATCTTCAGTTT
ET0009606      <-- ...............................CTTTCACAATCTTCAGTTT
CT0074434      <-- .................................TTCACAATCTTCAGTTT
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> GATCTCAGGAGGGTTGAAGAAGTTAAAGAAGCTTTCACAATCTTCAGTTT
CT0072824      --> ..................................................

               650    -    700
RU06019        --> TGGTTATGGGTTTAGAATTTTTTGATCCCTTTCTT-GGCTTCTTCTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................  Ethylene
ET0110367      <-- ..................................................  Ethylene
ET0085584      <-- ..................................................  Ethylene
CT0020384      <-- TGGTTATAGGTTTAGAATTTTTTGATCCCTTTCTT-GGCTTCTTCTTCAA  Control
CT0028925      <-- TGGTTATAGGTTTAGAATTTTTTGATCCCTTTCTT-GGCTTCTTCTTCAA  Control
CT0050555      <-- TGGTTATAGGTTTAGAATTTTTTGATCCCTTTCTT-GGCTTCTTCTTCAA  Control
ET0009606      <-- TGGTTATGGGTTTAGAATTTTTTGATCCCTTTCTT-GGCTTCTTCTTCAA  Ethylene
CT0074434      <-- TGGTTATAGGTTTAGAATTTTTTGATCCCTTTCTT-GGCTTCTTCTTCAA  Control
ET0068321      <-- ggtTTATGGGTTTAGAATTTTTTGATCCCTTTCTTTGGCTTCTTCTTCAA  Ethylene
CT0035842      <-- ..................................................  Control
ET0060531      <-- ..................................................  Ethylene
ET0061103      <-- ..................................................  Ethylene
ET0061527      <-- ..................................................  Ethylene
ET0062847      <-- ..................................................  Ethylene
ET0063186      <-- ..................................................  Ethylene
ET0063888      <-- ..................................................  Ethylene
ET0065353      <-- ..................................................  Ethylene
ET0065935      <-- ..................................................  Ethylene
ET0066957      <-- ..................................................  Ethylene
ET0066974      <-- ..................................................  Ethylene
ET0067981      <-- ..................................................  Ethylene
ET0069960      <-- ..................................................  Ethylene
ET0070599      <-- ..................................................  Ethylene
ET0071655      <-- ..................................................  Ethylene
ET0073512      <-- ..................................................  Ethylene
ET0084844      <-- ..................................................  Ethylene
ET0086918      <-- ..................................................  Ethylene
ET0087397      <-- ..................................................  Ethylene
ET0087669      <-- ..................................................  Ethylene
ET0089353      <-- ..................................................  Ethylene
ET0091238      <-- ..................................................  Ethylene
ET0091265      <-- ..................................................  Ethylene
ET0093636      <-- ..................................................  Ethylene
ET0093770      <-- ..................................................  Ethylene
ET0093991      <-- ..................................................  Ethylene
ET0094792      <-- ..................................................  Ethylene
ET0095201      <-- ..................................................  Ethylene
ET0095664      <-- ..................................................  Ethylene
ET0095841      <-- ..................................................  Ethylene
ET0095976      <-- ..................................................  Ethylene
ET0096644      <-- ..................................................  Ethylene
ET0097282      <-- ..................................................  Ethylene
ET0097879      <-- ..................................................  Ethylene
ET0097907      <-- ..................................................  Ethylene
ET0142042      <-- ..................................................  Ethylene
ET0059949      <-- ..................................................  Ethylene
ET0061075      <-- ..................................................  Ethylene
ET0064275      <-- ..................................................  Ethylene
ET0065965      <-- ..................................................  Ethylene
ET0068794      <-- ..................................................  Ethylene
ET0072257      <-- ..................................................  Ethylene
ET0075924      <-- ..................................................  Ethylene
ET0084007      <-- ..................................................  Ethylene
ET0087865      <-- ..................................................  Ethylene
ET0088240      <-- ..................................................  Ethylene
ET0088458      <-- ..................................................  Ethylene
ET0089654      <-- ..................................................  Ethylene
ET0090572      <-- ..................................................  Ethylene
ET0090935      <-- ..................................................  Ethylene
ET0092752      <-- ..................................................  Ethylene
ET0093728      <-- ..................................................  Ethylene
ET0096150      <-- ..................................................  Ethylene
ET0098127      <-- ..................................................  Ethylene
ET0102962      <-- ..................................................  Ethylene
ET0141940      <-- ..................................................  Ethylene
ET0059289      <-- ..................................................  Ethylene
ET0059884      <-- ..................................................  Ethylene
ET0065363      <-- ..................................................  Ethylene
ET0065512      <-- ..................................................  Ethylene
ET0066534      <-- ..................................................  Ethylene
ET0071381      <-- ..................................................  Ethylene
ET0088470      <-- ..................................................  Ethylene
ET0090522      <-- ..................................................  Ethylene
ET0093350      <-- ..................................................  Ethylene
ET0094228      <-- ..................................................  Ethylene
ET0096588      <-- ..................................................  Ethylene
ET0100878      <-- ..................................................  Ethylene
ET0105978      <-- ..................................................  Ethylene
ET0142592      <-- ..................................................  Ethylene
ET0062038      <-- ..................................................  Ethylene
ET0070637      <-- ..................................................  Ethylene
ET0096668      <-- ..................................................  Ethylene
ET0142002      <-- ..................................................  Ethylene
ET0142514      <-- ..................................................  Ethylene
ET0069204      <-- ..................................................  Ethylene
ET0093150      <-- ..................................................  Ethylene
ET0066084      <-- ..................................................  Ethylene
ET0078181      <-- ..................................................  Ethylene
ET0080256      <-- ..................................................  Ethylene
ET0084870      <-- ..................................................  Ethylene
ET0142662      <-- ..................................................  Ethylene
ET0142311      <-- ..................................................  Ethylene
CT0080134      --> ..................................................  Control
CT0120139      --> ..................................................  Control
CT0120150      --> ..................................................  Control
CT0121136      --> ..................................................  Control
CT0121198      --> ..................................................  Control
CT0121581      --> ..................................................  Control
CT0122128      --> ..................................................  Control
CT0122677      --> ..................................................  Control
CT0123239      --> ..................................................  Control
CT0124846      --> ..................................................  Control
CT0120140      --> ..................................................  Control
CT0070886      --> ..................................................  Control
ET0034224      --> ..................................................  Ethylene
ET0035477      --> ..................................................  Ethylene
ET0057562      --> ..................................................  Ethylene
ET0111742      --> ..................................................  Ethylene
ET0115957      --> ..................................................  Ethylene
ET0117779      --> ..................................................  Ethylene
ET0122586      --> ..................................................  Ethylene
CT0110899      --> ..................................................  Control
ET0013415      --> TGGTTATGGGTTTAGAATTTTT-GATCCCTTTCTT-GGCTTCTTCTTCAA  Ethylene
CT0072824      --> ..................................................  Control

               700    -    750
RU06019        --> GATCTTCTGTGTCAAGCTTTTCCCAGGATACCATTCAATCTCCGTCCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- GATCTTCTGTGTCAAGCTTTTCCCAGGATACCATTCAATCTCCGTCCCAA
CT0028925      <-- GATCTTCTGTGTCAAGCTTTTCCCAGGATACCATTCAATCTCCGTCCCAA
CT0050555      <-- GATCTTCTGTGTCAAGCTTTTCCCAGGATACCATTCAATCTCCGTCCCAA
ET0009606      <-- GATCTTCTGTGTCAAGCTTTTCCCAGGATACCATTCAATCTCCGTCCCAA
CT0074434      <-- GATCTTCTGTGTCAAGCTTTTCCCAGGATACCATTCAATCTCCGTCCCAA
ET0068321      <-- GATCTTCTGTGTCAAGCTTTTCCCAGGATACCATTCAATCTCCGTCCCAA
CT0035842      <-- ...........................ATACCATTCAATCTCCGTCCCAA
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> GATCTTCTGTGTCAAGCTTT..............................
CT0072824      --> ..................................................

               750    -    800
RU06019        --> TTGCCTTCTCCAAAATAGGTTCATCGTCATCAATCATGTGATACGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- TTG...............................................
CT0028925      <-- TTG...............................................
CT0050555      <-- TTG...............................................
ET0009606      <-- TTGCCTTCTCCAAAATAG................................
CT0074434      <-- TTG...............................................
ET0068321      <-- TTGCCTTCTCCAAAATAGGTTCATCGTCATCAATCATGTGATACGTTTTT
CT0035842      <-- TTGCCTTCTCCAAAATAGGTTCATCGTCATCAATCATGTGATACGTTTTT
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               800    -    850
RU06019        --> GTCAGGACAGAATTTTTGAAATAAGGATTGGCATTGAAGAAAAACTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- GTCAGGACAGAATTTTTGAAATAAGGATTGGCATTGAAGAAAAACTCAAG
CT0035842      <-- GTCAGGACAGAATTTTTGAAATAAGGATTGGCATTGAAGAAAAACTCAAG
ET0060531      <-- ..................................................
ET0061103      <-- ..................................................
ET0061527      <-- ..................................................
ET0062847      <-- ..................................................
ET0063186      <-- ..................................................
ET0063888      <-- ..................................................
ET0065353      <-- ..................................................
ET0065935      <-- ..................................................
ET0066957      <-- ..................................................
ET0066974      <-- ..................................................
ET0067981      <-- ..................................................
ET0069960      <-- ..................................................
ET0070599      <-- ..................................................
ET0071655      <-- ..................................................
ET0073512      <-- ..................................................
ET0084844      <-- ..................................................
ET0086918      <-- ..................................................
ET0087397      <-- ..................................................
ET0087669      <-- ..................................................
ET0089353      <-- ..................................................
ET0091238      <-- ..................................................
ET0091265      <-- ..................................................
ET0093636      <-- ..................................................
ET0093770      <-- ..................................................
ET0093991      <-- ..................................................
ET0094792      <-- ..................................................
ET0095201      <-- ..................................................
ET0095664      <-- ..................................................
ET0095841      <-- ..................................................
ET0095976      <-- ..................................................
ET0096644      <-- ..................................................
ET0097282      <-- ..................................................
ET0097879      <-- ..................................................
ET0097907      <-- ..................................................
ET0142042      <-- ..................................................
ET0059949      <-- ..................................................
ET0061075      <-- ..................................................
ET0064275      <-- ..................................................
ET0065965      <-- ..................................................
ET0068794      <-- ..................................................
ET0072257      <-- ..................................................
ET0075924      <-- ..................................................
ET0084007      <-- ..................................................
ET0087865      <-- ..................................................
ET0088240      <-- ..................................................
ET0088458      <-- ..................................................
ET0089654      <-- ..................................................
ET0090572      <-- ..................................................
ET0090935      <-- ..................................................
ET0092752      <-- ..................................................
ET0093728      <-- ..................................................
ET0096150      <-- ..................................................
ET0098127      <-- ..................................................
ET0102962      <-- ..................................................
ET0141940      <-- ..................................................
ET0059289      <-- ..................................................
ET0059884      <-- ..................................................
ET0065363      <-- ..................................................
ET0065512      <-- ..................................................
ET0066534      <-- ..................................................
ET0071381      <-- ..................................................
ET0088470      <-- ..................................................
ET0090522      <-- ..................................................
ET0093350      <-- ..................................................
ET0094228      <-- ..................................................
ET0096588      <-- ..................................................
ET0100878      <-- ..................................................
ET0105978      <-- ..................................................
ET0142592      <-- ..................................................
ET0062038      <-- ..................................................
ET0070637      <-- ..................................................
ET0096668      <-- ..................................................
ET0142002      <-- ..................................................
ET0142514      <-- ..................................................
ET0069204      <-- ..................................................
ET0093150      <-- ..................................................
ET0066084      <-- ..................................................
ET0078181      <-- ..................................................
ET0080256      <-- ..................................................
ET0084870      <-- ..................................................
ET0142662      <-- ..................................................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..............................................CAAG

               850    -    900
RU06019        --> CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- CTTGAATCCTTTCGGTTCATCTATC.........................
CT0035842      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCC.......
ET0060531      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0061103      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0061527      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0062847      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0063186      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0063888      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0065353      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0065935      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0066957      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0066974      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0067981      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0069960      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0070599      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0071655      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0073512      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0084844      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0086918      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0087397      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0087669      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0089353      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0091238      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0091265      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0093636      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0093770      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0093991      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0094792      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0095201      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0095664      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0095841      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0095976      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0096644      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0097282      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0097879      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0097907      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0142042      <-- CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0059949      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0061075      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0064275      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0065965      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0068794      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0072257      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0075924      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0084007      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0087865      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0088240      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0088458      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0089654      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0090572      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0090935      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0092752      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0093728      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0096150      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0098127      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0102962      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0141940      <-- .TTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0059289      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0059884      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0065363      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0065512      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0066534      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0071381      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0088470      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0090522      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0093350      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0094228      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0096588      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0100878      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGGG
ET0105978      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0142592      <-- ..TGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0062038      <-- ...GAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0070637      <-- ...GAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0096668      <-- ...GAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0142002      <-- ...GAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0142514      <-- ...GAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0069204      <-- .....ATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0093150      <-- .......CCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0066084      <-- ........CTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0078181      <-- ........CTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0080256      <-- ........CTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGGG
ET0084870      <-- ........CTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0142662      <-- ........CTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-
ET0142311      <-- ..........TTCGGTTCATCTATCCTATAC-ACTTGATATCCTTGAGG-
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> CTTGAATCCTTTCGGTTCATCTATCCTATACCACTTGATATCCTTGAGG-

               900    -    950
RU06019        --> TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0061103      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0061527      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0062847      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0063186      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0063888      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0065353      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0065935      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0066957      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0066974      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0067981      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0069960      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0070599      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0071655      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0073512      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0084844      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0086918      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0087397      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0087669      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0089353      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0091238      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0091265      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0093636      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0093770      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0093991      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0094792      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0095201      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0095664      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0095841      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0095976      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0096644      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0097282      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0097879      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0097907      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0142042      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0059949      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0061075      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0064275      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0065965      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0068794      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0072257      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0075924      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0084007      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0087865      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0088240      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0088458      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0089654      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0090572      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0090935      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0092752      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0093728      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0096150      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0098127      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0102962      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0141940      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0059289      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0059884      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0065363      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0065512      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0066534      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0071381      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0088470      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0090522      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0093350      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0094228      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0096588      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0100878      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0105978      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAAA
ET0142592      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAAAGAA-
ET0062038      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0070637      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0096668      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0142002      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAAATCTCCTCAGAAA-GAA-
ET0142514      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0069204      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0093150      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0066084      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0078181      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0080256      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0084870      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0142662      <-- TACTTCAGAGCCCCTTCCATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
ET0142311      <-- TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> TACTTCAGAGCCCCTTC-ATCACGCTCTGAAA-TCTCCTCAGAAA-GAA-

               950    -   1000
RU06019        --> CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0061103      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0061527      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0062847      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0063186      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0063888      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0065353      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0065935      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0066957      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0066974      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0067981      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0069960      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0070599      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0071655      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0073512      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0084844      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0086918      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0087397      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0087669      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0089353      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0091238      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0091265      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0093636      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0093770      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0093991      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0094792      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0095201      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTTTCT
ET0095664      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0095841      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0095976      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0096644      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0097282      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0097879      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0097907      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0142042      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0059949      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0061075      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0064275      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0065965      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0068794      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0072257      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0075924      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0084007      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0087865      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0088240      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0088458      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0089654      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0090572      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0090935      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0092752      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0093728      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0096150      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0098127      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0102962      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0141940      <-- CTTCATTGGTCTTCATTGTCGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0059289      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0059884      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0065363      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0065512      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0066534      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0071381      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0088470      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0090522      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0093350      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0094228      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0096588      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0100878      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0105978      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0142592      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0062038      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0070637      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0096668      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0142002      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0142514      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0069204      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0093150      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0066084      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0078181      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0080256      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0084870      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0142662      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTT-CT
ET0142311      <-- CTTCATTGGTCTTCATTG-CGGTAAGCCAGAAGTCAGGCACTCCTTTTCT
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> CTTCATTGGTCTTCATTG-CCGTAAGCCAGAAGTCAGGCACTCCTTT-CT

               1000   -   1050
RU06019        --> CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0061103      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0061527      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0062847      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0063186      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0063888      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0065353      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0065935      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0066957      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0066974      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0067981      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0069960      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0070599      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0071655      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0073512      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0084844      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0086918      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0087397      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0087669      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0089353      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0091238      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0091265      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0093636      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0093770      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0093991      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0094792      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0095201      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0095664      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0095841      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0095976      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0096644      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0097282      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0097879      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0097907      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0142042      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0059949      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0061075      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0064275      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0065965      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0068794      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0072257      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0075924      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0084007      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0087865      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0088240      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0088458      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0089654      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0090572      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0090935      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0092752      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0093728      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0096150      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0098127      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0102962      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0141940      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0059289      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0059884      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0065363      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0065512      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0066534      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0071381      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0088470      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0090522      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0093350      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0094228      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0096588      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0100878      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0105978      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTTTCACTCC
ET0142592      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0062038      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0070637      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0096668      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0142002      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0142514      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0069204      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0093150      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0066084      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0078181      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0080256      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0084870      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0142662      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
ET0142311      <-- CTTCAGTGGCATCATCTCCTTGGTCCACTGCAGATTCATTTTT-CACTCC
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> CTTCAGTGGCAT......................................

               1050   -   1100
RU06019        --> TT-CAA-CTT-CGGTTA-C-A--CCGTTAA--C-AAA-TTT--A--CGT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0061103      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0061527      <-- TT-CAA-CTT-CGGTTAACAA--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0062847      <-- TT-CAA-CTT-CGGTTAACAA--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0063186      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0063888      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0065353      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0065935      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0066957      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0066974      <-- TT-CAA-CTT-CGGTTAACAA--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0067981      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0069960      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0070599      <-- TT-CAA-CTT-CGGTTAAC-A-ACCGTTAAAAC-AAAATTT--AAACGT-
ET0071655      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0073512      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0084844      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0086918      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0087397      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0087669      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0089353      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0091238      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0091265      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0093636      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0093770      <-- TT-CAA-CTTACGGTTAAC-A-ACCGTTAAAAC-AAAATTT--AAACGT-
ET0093991      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A--CGT-
ET0094792      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0095201      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTA--A--CGT-
ET0095664      <-- TT-CAA-CTT-CGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0095841      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A--CGT-
ET0095976      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0096644      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-ACTAAA-TTTTAA--CGTT
ET0097282      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0097879      <-- TT-CAA-CTT-CGGTTAACAA--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0097907      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0142042      <-- TT-CAAACTTACGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0059949      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0061075      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0064275      <-- TT-CAA-CTT-CGGTTAACAA--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0065965      <-- TT-CAA-CTT-CGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0068794      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0072257      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0075924      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0084007      <-- TT-CAA-CTT-CGGTTAACAA--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0087865      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0088240      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0088458      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0089654      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0090572      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0090935      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0092752      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0093728      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0096150      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0098127      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0102962      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0141940      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0059289      <-- TTACAAACTTACGGTTAAC-AAACCGTTAAAAC-AAAATTT--AAACGT-
ET0059884      <-- TT-CAA-CTTACGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0065363      <-- TT-CAAACTTACGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0065512      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0066534      <-- TT-CAA-CTTACGGTTAACAA--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0071381      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0088470      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0090522      <-- TT-CAA-CTT-CGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0093350      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0094228      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0096588      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA--C-AAA-TTT--A-ACGT-
ET0100878      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0105978      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0142592      <-- TT-CAA-CTT-CGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0062038      <-- TT-CAA-CTTACGGTTAAC-A-ACCGTTAAAAC-AAAATTT--A-ACGT-
ET0070637      <-- TT-CAA-CTTACGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0096668      <-- TT-CAA-CTT-CGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0142002      <-- TT-CAAACTTACGGTTAAC-A-ACCGTTAAAAC-AAAATTT--A-ACGT-
ET0142514      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0069204      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAA-TTT--A-ACGT-
ET0093150      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0066084      <-- TT-CAA-CTT-CGGTTAACAA--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0078181      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0080256      <-- TT-CAA-CTT-CGGTTAAC-A-ACCGTTAA-AC-AAAATTT--A-ACGT-
ET0084870      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA-AC-AAA-TTT--A-ACGT-
ET0142662      <-- TT-CAA-CTT-CGGTTA-C-A--CCGTTAA--C-AAA-TTT--A--CGT-
ET0142311      <-- TT-CAA-CTT-CGGTTA-C-A-ACCGTTAAacaaaatttaacgtt.....
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               1100   -   1150
RU06019        --> AAA-TAAAACT-AAAA-CTTTTAAAAAGTAAAAAAGTAAAAAAAGAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0133291      <-- ..................................................
ET0110367      <-- ..................................................
ET0085584      <-- ..................................................
CT0020384      <-- ..................................................
CT0028925      <-- ..................................................
CT0050555      <-- ..................................................
ET0009606      <-- ..................................................
CT0074434      <-- ..................................................
ET0068321      <-- ..................................................
CT0035842      <-- ..................................................
ET0060531      <-- AAA-TAAA-CT-AAAA-CTT--TAAAAGTAAAAA-GTAAAAAAAGAAAAA
ET0061103      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0061527      <-- AAA-TAAA-CT-AAAA-CTT--TAAAAGTAAAAA-GTAAAAAA-GAAAAA
ET0062847      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0063186      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0063888      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0065353      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0065935      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0066957      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0066974      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0067981      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0069960      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0070599      <-- AAAATAAAACT-AAAAacttt.............................
ET0071655      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0073512      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0084844      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0086918      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0087397      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0087669      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0089353      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0091238      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0091265      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0093636      <-- AAAATAAAACT-AAAAacttt.............................
ET0093770      <-- AAAATAAAACT-AAAAACTTTT............................
ET0093991      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0094792      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0095201      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0095664      <-- AAAATAAAACT-AAAAacttt.............................
ET0095841      <-- AAtaactaaacttt....................................
ET0095976      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0096644      <-- AAA-TTAAACTTAAAA-CTTTTAAAAAGTt....................
ET0097282      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0097879      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0097907      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0142042      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0059949      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0061075      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0064275      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0065965      <-- AAA-TAAAACT-AAAAacttt.............................
ET0068794      <-- AAA-ATAAACT-AAAA-CTTT.............................
ET0072257      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0075924      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0084007      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0087865      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0088240      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0088458      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0089654      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0090572      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0090935      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0092752      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0093728      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0096150      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0098127      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0102962      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0141940      <-- AAA-TAAAACT-AAAA-CTTTAAAAAAGTAAAAAAagt............
ET0059289      <-- AAAATAAAACT-AAAA-CTTT-AAAAAGTAAAAAAGTAAAAAAAGAAAAA
ET0059884      <-- AAA-ATAAACT-AAAA-CTTT-AAAAAGTAAAAAAGTAAAAAAAGAAAAA
ET0065363      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0065512      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0066534      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0071381      <-- AAA-TAAAACT-AAAA-CTTTT............................
ET0088470      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0090522      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0093350      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0094228      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0096588      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0100878      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0105978      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0142592      <-- AAA-TAAA-CT-AAAA-CTTT-AAAAAGTt....................
ET0062038      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0070637      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0096668      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0142002      <-- AAAATAAAACT-AAAA-CTTT.............................
ET0142514      <-- AAAATAAAACT-AAAAACTTTTAAAAAag.....................
ET0069204      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0093150      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0066084      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0078181      <-- AAA-ATAAACT-AAAA-CTTT.............................
ET0080256      <-- AAAATAAAACT-AAAAacttt.............................
ET0084870      <-- AAA-TAAA-CT-AAAA-CTTT.............................
ET0142662      <-- AAA-TAAA-CT-AAAA-CTTTTAAAAAGTt....................
ET0142311      <-- ..................................................
CT0080134      --> ..................................................
CT0120139      --> ..................................................
CT0120150      --> ..................................................
CT0121136      --> ..................................................
CT0121198      --> ..................................................
CT0121581      --> ..................................................
CT0122128      --> ..................................................
CT0122677      --> ..................................................
CT0123239      --> ..................................................
CT0124846      --> ..................................................
CT0120140      --> ..................................................
CT0070886      --> ..................................................
ET0034224      --> ..................................................
ET0035477      --> ..................................................
ET0057562      --> ..................................................
ET0111742      --> ..................................................
ET0115957      --> ..................................................
ET0117779      --> ..................................................
ET0122586      --> ..................................................
CT0110899      --> ..................................................
ET0013415      --> ..................................................
CT0072824      --> ..................................................

               1150   -   1200
RU06019        --> AAGAAAAAAAGG
                   ~~~~~~~~~~~~
ET0133291      <-- ............
ET0110367      <-- ............
ET0085584      <-- ............
CT0020384      <-- ............
CT0028925      <-- ............
CT0050555      <-- ............
ET0009606      <-- ............
CT0074434      <-- ............
ET0068321      <-- ............
CT0035842      <-- ............
ET0060531      <-- AAGAAAAAAAGG
ET0061103      <-- ............
ET0061527      <-- AAGAAAAAAAGG
ET0062847      <-- ............
ET0063186      <-- ............
ET0063888      <-- ............
ET0065353      <-- ............
ET0065935      <-- ............
ET0066957      <-- ............
ET0066974      <-- ............
ET0067981      <-- ............
ET0069960      <-- ............
ET0070599      <-- ............
ET0071655      <-- ............
ET0073512      <-- ............
ET0084844      <-- ............
ET0086918      <-- ............
ET0087397      <-- ............
ET0087669      <-- ............
ET0089353      <-- ............
ET0091238      <-- ............
ET0091265      <-- ............
ET0093636      <-- ............
ET0093770      <-- ............
ET0093991      <-- ............
ET0094792      <-- ............
ET0095201      <-- ............
ET0095664      <-- ............
ET0095841      <-- ............
ET0095976      <-- ............
ET0096644      <-- ............
ET0097282      <-- ............
ET0097879      <-- ............
ET0097907      <-- ............
ET0142042      <-- ............
ET0059949      <-- ............
ET0061075      <-- ............
ET0064275      <-- ............
ET0065965      <-- ............
ET0068794      <-- ............
ET0072257      <-- ............
ET0075924      <-- ............
ET0084007      <-- ............
ET0087865      <-- ............
ET0088240      <-- ............
ET0088458      <-- ............
ET0089654      <-- ............
ET0090572      <-- ............
ET0090935      <-- ............
ET0092752      <-- ............
ET0093728      <-- ............
ET0096150      <-- ............
ET0098127      <-- ............
ET0102962      <-- ............
ET0141940      <-- ............
ET0059289      <-- AAGAAAAAAAGG
ET0059884      <-- AAGAAAAAAAGG
ET0065363      <-- ............
ET0065512      <-- ............
ET0066534      <-- ............
ET0071381      <-- ............
ET0088470      <-- ............
ET0090522      <-- ............
ET0093350      <-- ............
ET0094228      <-- ............
ET0096588      <-- ............
ET0100878      <-- ............
ET0105978      <-- ............
ET0142592      <-- ............
ET0062038      <-- ............
ET0070637      <-- ............
ET0096668      <-- ............
ET0142002      <-- ............
ET0142514      <-- ............
ET0069204      <-- ............
ET0093150      <-- ............
ET0066084      <-- ............
ET0078181      <-- ............
ET0080256      <-- ............
ET0084870      <-- ............
ET0142662      <-- ............
ET0142311      <-- ............
CT0080134      --> ............
CT0120139      --> ............
CT0120150      --> ............
CT0121136      --> ............
CT0121198      --> ............
CT0121581      --> ............
CT0122128      --> ............
CT0122677      --> ............
CT0123239      --> ............
CT0124846      --> ............
CT0120140      --> ............
CT0070886      --> ............
ET0034224      --> ............
ET0035477      --> ............
ET0057562      --> ............
ET0111742      --> ............
ET0115957      --> ............
ET0117779      --> ............
ET0122586      --> ............
CT0110899      --> ............
ET0013415      --> ............
CT0072824      --> ............