SNPs of unigene RU06135
               1      -     51
RU06135        --> AAAATTACAAATTATAAACTCTATTATTTCATTTTCCATATATAGACATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- AAAATTACAAATTATAAACTCTATTATTTCATTTTCCATATATAGACATT
ET0030490      <-- .....actAAATTATAAAGTCTATTATTTCATTTTCCATATATAGACATT
ET0044605      <-- .....actAAATTATAAAGTCTATTATTTCATTTTCCATATATAGACATT
ET0054506      <-- .....actAAATTATAAAGTCTATTATTTCATTTTCCATATATAGACATT
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> .....TACAAATTATAAAGTCTATTATTTCATTTTCCATATATAGACATT
ET0036876      --> ......ACAAATTATAAACTCTATTATTTCATTTTCCATATATAGACATT
ET0084825      --> ......ACAAATTATAAAGTCTATTATTTCATTTTCCATATATAGACATT
ET0109126      --> ......ACAAATTATAAAGTCTATTATTTCATTTTCCATATATAGACATT
ET0009421      --> .............................CATTTTCCATATATAGACATT
ET0010655      --> .............................CATTTTCCATATATAGACATT
ET0138674      --> .............................CATTTTCCATATATAGACATT
ET0139212      --> .............................CATTTTCCATATATAGACATT
ET0139912      --> .............................CATTTTCCATATATAGACATT
ET0139992      --> .............................CATTTTCCATATATAGACATT
ET0140859      --> .............................CATTTTCCATATATAGACATT
CT0020767      --> ...................................CCATATATAGACATT
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               51     -    101
RU06135        --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0030490      <-- CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0044605      <-- CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0054506      <-- CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0036876      --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0084825      --> CCCCC-TTGGCCAAAGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0109126      --> CCCCC-TTGGCCAAAGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0009421      --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0010655      --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0138674      --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0139212      --> CCCCCCTTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0139912      --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0139992      --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
ET0140859      --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
CT0020767      --> CCCCC-TTGGCCAAGGAGTACATTGACTTTGCCCTAGTTCTGTAAACCTC
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               101    -    151
RU06135        --> TCTAGC---AA---AAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- TCTAGC---AA---AAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0030490      <-- TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0044605      <-- TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0054506      <-- TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTTT
CT0045837      <-- ...............................ccaAATATTTACATTTTT-
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0036876      --> TCTAGC---AA---AAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0084825      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0109126      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0009421      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0010655      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0138674      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0139212      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0139912      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0139992      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
ET0140859      --> TCTAGCGATAAGAGAAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
CT0020767      --> TCTAGC---AA---AAGAGAAGAGAAGAAAACCCAATATTTACATTTTT-
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               151    -    201
RU06135        --> GGACTCAAAACTTATGTATAACCACTCTAAAAACCACCCTAATATTTTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- GGACTCAAAACTT.....................................
ET0030490      <-- GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
ET0044605      <-- GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
ET0054506      <-- GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTTT
CT0045837      <-- GGACTCAAAACTTATGTATAACCACTCTAAAAACCACCCTAATATTTTT-
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> GGACTCAAAACTTAGGTA................................
ET0036876      --> GGACTCAAAACTTATGTATAACCACTCTAAAAACCACCCTAATATTTTT-
ET0084825      --> GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
ET0109126      --> GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
ET0009421      --> GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
ET0010655      --> G.................................................
ET0138674      --> GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
ET0139212      --> GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
ET0139912      --> GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
ET0139992      --> GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
ET0140859      --> GGACTCAAAACTTAGGTATAACCACTCTAGAAACCACCCTAATATTTTT-
CT0020767      --> GGACTCAAAACTTATGTATAACCACTCTAAAAACCACCCTAATATTTTT-
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               201    -    251
RU06135        --> CAGAACACTAGCATCATT-ATTTTTTTTTT----GT--GTTT-CCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- CAGAACACTACCATCATT-AATTTTTTTTTt...................
ET0044605      <-- CAGAACAC..........................................
ET0054506      <-- CAGAACAC..........................................
CT0045837      <-- CAGAACACTAGCATCATT-ATTTTTTTTTT----GT--GTTT-CCTTCTT
CT0021528      <-- ......................TTTTTTTT----GT--GTTT-CCTTCTT
CT0006370      <-- .......................TTTTTTT----GT--GTTT-CCTTCTT
CT0040062      <-- ......................gTTTTTTT----GT--GTTT-CCTTCTT
CT0048277      <-- ...........................................CCTTCTT
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> CAGAACACTAGCATCATTTATTTTTTTTTT----GT--GTTTTCCTTCTT
ET0084825      --> CAGAACACTACCATCATT-ATTTTTTTTTT----TT--GT..........
ET0109126      --> CAGAACACTACCATCATT-ATTTTTTTTTT----TT--GTg.........
ET0009421      --> CAGAACACTA........................................
ET0010655      --> ..................................................
ET0138674      --> CAGAACACTACCATCATT-ATTTTTTTTTT-TTTGT-TGTTT-CCTTCTT
ET0139212      --> CAGAACACTACCATCATT-ATTTTTTTTTTtttgttgtttc.........
ET0139912      --> CAGAACACTACCATCATT-ATTTTTTTTTT-TTTGTTTGTTT-CCTTCTT
ET0139992      --> CAGAACACTACCATCATT-ATTTTTTTTTTTTTTGT-TGTTT-CCTTCTT
ET0140859      --> CAGAACACTACCATCATT-ATTTTTTTTTTttttgtttgtttccttcttg
CT0020767      --> CAGAACACTAGCATCA..................................
CT0090943      --> ......ACTAGCATCATT-ATTTTTTTTTT----GT--GTTT-CCTTCTT
ET0129257      --> ....................aTTTTTTTTA----GT--GTTTTCCTTCTT
ET0136003      --> ......................TTTTTTTT----GT--GTTT-CCTTCTT
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               251    -    301
RU06135        --> GGTCCTGCAGAGCTCCTCCTACTGGCACTTTGTGTCTTATTCTCTATACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- GGTCCTGCAGAGCTCCTCCTACTGGCACTTTGTGTCTTATTCTCTATACT
CT0021528      <-- GGTCCTGCAGAGCTCCTCCTACCGGCACTTTGTGTCTTATTCTCTATACT
CT0006370      <-- GGTCCAGCAGAGCTCCTCCTACTGGCACTTTGTGTCTTATTCTCTATACT
CT0040062      <-- GGTCCTGCAGAGCTCCTCCTACCGGCACTTTGTGTCTTATTCTCTATACT
CT0048277      <-- GGTCCTGCAGAGCTCCTCCTACCGGCACTTTGTGTCTTATTCTCTATACT
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> GGTCCTGCAGAGCTCCTCCTACTGGCACTTTGTGTCTTATTCTCT.....
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> GGTCCTGCAGAGCTCCTCCTACCGGCACTTTGTGTCTTATT.........
ET0139212      --> ..................................................
ET0139912      --> GGTCCTGCAGAGCTCCTCCTACCGGCACTTT-TGTCTTATTC........
ET0139992      --> GGTCCTGCAGAGCTCCTCCTACCGGCACTTTGTGTCTTATT.........
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> GGTCCTGCAGAGCTCCTCCTACTGGCACTTTGTGTCTTATTCTCTATACT
ET0129257      --> GGTCCTGCAGAGCTCCTCCTACCGGCACTTTGTGTCTTATTCTCTATACT
ET0136003      --> GGTCCTGCAGAGCTCCTCCTACCGGCACTTTGTGTCTTATTCTCTATACT
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               301    -    351
RU06135        --> TTAACCCAACACTT-GCACTTCCCATATTGGCTTCTATGTACACAATACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- TTAACCCAACACTT-GCACTTCCCATATTGGCTTCTATGTACACAATACC
CT0021528      <-- TTAACCCAACACTTTGCACTTCCCATATTCGCTTCTATGTACACAATACC
CT0006370      <-- TTAACCCAACACTT-GCACTTCCCATATTGGCTTCTATGTACACAATACC
CT0040062      <-- TTAACCCAACACTTTGCACTTCCCATATTCGCTTCTATGTACACAATACC
CT0048277      <-- TTAACCCAACACTTTGCACTTCCCATATTCGCTTCTATGTACACAATACC
ET0053310      <-- ..............................GCTTCTATGTACACAATACC
RH25AC28       <-- ........................................ACACAATACC
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> TTAACCCAACACTT-GCACTTCCCATATTGGCTTCTATGTACACAATACC
ET0129257      --> TTAACCCAACACTTTGCACTTCCCATATTCGCTTCTATGTACACAATACC
ET0136003      --> TTAACCCAACACTTTGCACTTCCCATATTCGCTTCTATGTACACAATACC
CT0103571      --> ..........ACTT-GCACTTCCCATATTGGCTTCTATGTACACAATACC
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               351    -    401
RU06135        --> AGAAAGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CACGGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- AGAAAGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CACGGCCT
CT0021528      <-- AGAAAGCTAAGTGGGCACTAC-AGTTTccaaagc................
CT0006370      <-- AGAAAGCTAAGTGGGCACTACTA...........................
CT0040062      <-- AGAAAGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CACGGCCT
CT0048277      <-- AGAAAGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CAC.....
ET0053310      <-- AGAAAGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CACGGCCT
RH25AC28       <-- AGAAAGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CACGGCCT
ET0148346      <-- .........................TTAACTTAGCTCCAAAACACGGCCT
CT0060752      <-- ..............................TTAGCTCCAAA-CACGGCCT
ET0148169      <-- ..............................TTAGCTCCAAA-CACGGCCT
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> AGAAAGCT..........................................
ET0129257      --> AGAAAGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CACGGCCT
ET0136003      --> AGAAAGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CACGGCCT
CT0103571      --> AGAAAGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CACGGCCT
CT0032633      --> ....AGCTAAGTGGGCACTACTAGTTTAACTTAGCTCCAAA-CACGGCCT
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               401    -    451
RU06135        --> TTTGGCGAAAAGCACAAGTGTTCGGAAGGGCATTGCTGCAACTAACTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................  Control
ET0030490      <-- ..................................................  Ethylene
ET0044605      <-- ..................................................  Ethylene
ET0054506      <-- ..................................................  Ethylene
CT0045837      <-- TTTGGCGAAAAGCACAAG................................  Control
CT0021528      <-- ..................................................  Control
CT0006370      <-- ..................................................  Control
CT0040062      <-- TTTGGCGAAAAGCACGAGTGTT............................  Control
CT0048277      <-- ..................................................  Control
ET0053310      <-- TTTGGCGAAAAGCACGAGTGTTCGGAGGGGCATTGCTGCAACTAACTTTG  Ethylene
RH25AC28       <-- TTTGGCGAAAAGCACAAGTGTTCGGAAGGGCATTGCTGCAACTAACTTTG  WaterDS
ET0148346      <-- TTTGGCGAAAAGCACGAGTGTTCGGAGGGGCATTGCTGCAACTAACTTTG  Ethylene
CT0060752      <-- TTTGGCGAAAAGCACAAGTGTTCGGAAGGGCATTGCTGCAACTAACTTTG  Control
ET0148169      <-- TTTGGCGAAAAGCACGAGTGTTCGGAGGGGCATTGCTGCAACTAACTTTG  Ethylene
CT0130674      <-- ..................................................  Control
CT0133355      <-- ..................................................  Control
CT0135515      <-- ..................................................  Control
ET0036444      <-- ..................................................  Ethylene
RH10F128       <-- ..................................................  WaterDS
RH46BM78       <-- ..................................................  WaterDS
ET0103580      <-- ..................................................  Ethylene
CT0073684      <-- ..................................................  Control
CT0136599      <-- ..................................................  Control
ET0087220      <-- ..................................................  Ethylene
ET0139306      <-- ..................................................  Ethylene
ET0104410      <-- ..................................................  Ethylene
ET0082773      <-- ..................................................  Ethylene
ET0084398      <-- ..................................................  Ethylene
ET0097151      <-- ..................................................  Ethylene
CT0041866      <-- ..................................................  Control
CT0128438      --> ..................................................  Control
ET0036876      --> ..................................................  Ethylene
ET0084825      --> ..................................................  Ethylene
ET0109126      --> ..................................................  Ethylene
ET0009421      --> ..................................................  Ethylene
ET0010655      --> ..................................................  Ethylene
ET0138674      --> ..................................................  Ethylene
ET0139212      --> ..................................................  Ethylene
ET0139912      --> ..................................................  Ethylene
ET0139992      --> ..................................................  Ethylene
ET0140859      --> ..................................................  Ethylene
CT0020767      --> ..................................................  Control
CT0090943      --> ..................................................  Control
ET0129257      --> TTTGGCGAAAAGCACGAGTGTTCGGAGGGGCATTGCTGCAACTAACTTTG  Ethylene
ET0136003      --> TTTGGCGAAAAGCACGAGTGTTCGGAGGGGCATTGCTGCAACTAACTTTG  Ethylene
CT0103571      --> TTTGGCGAAAAGCACAAGTGTTCGGAAGGGCATTGCTGCAACTAACTTTG  Control
CT0032633      --> TTTGGCGAAAAGCACAAGTGTTCGGAAGGGCATTGCTGCAACTAACTTTG  Control
ET0049183      --> ..........aacgaagtaGTTCGGAGGGGCATTGCTGCAACTAACTTTG  Ethylene
CT0022805      --> ..................................................  Control
CT0036609      --> ..................................................  Control
CT0042620      --> ..................................................  Control
CT0049709      --> ..................................................  Control
ET0030897      --> ..................................................  Ethylene
CT0022857      --> ..................................................  Control
CT0039974      --> ..................................................  Control
CT0042316      --> ..................................................  Control
ET0128600      --> ..................................................  Ethylene
ET0145141      --> ..................................................  Ethylene
CT0108915      --> ..................................................  Control
ET0078794      --> ..................................................  Ethylene
ET0074426      --> ..................................................  Ethylene
ET0079973      --> ..................................................  Ethylene
ET0107824      --> ..................................................  Ethylene
ET0103091      --> ..................................................  Ethylene
ET0043278      --> ..................................................  Ethylene
ET0005274      --> ..................................................  Ethylene
ET0013716      --> ..................................................  Ethylene
ET0018454      --> ..................................................  Ethylene
ET0013277      --> ..................................................  Ethylene
ET0034952      --> ..................................................  Ethylene
ET0039704      --> ..................................................  Ethylene
ET0036300      --> ..................................................  Ethylene
ET0049652      --> ..................................................  Ethylene
ET0082676      --> ..................................................  Ethylene
ET0115074      --> ..................................................  Ethylene

               451    -    501
RU06135        --> TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATATGG
RH25AC28       <-- TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATATGG
ET0148346      <-- TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATATGG
CT0060752      <-- TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATATGG
ET0148169      <-- TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATATGG
CT0130674      <-- ..........................................ggggggGG
CT0133355      <-- ..........................................ggggggGG
CT0135515      <-- ...........................................gggggGG
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATA...
ET0136003      --> TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATAg..
CT0103571      --> TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATATGG
CT0032633      --> TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATATGG
ET0049183      --> TATATGCGGGGGCATTAAGGTGATAAACTAGAAATACAAAGCTTATATGG
CT0022805      --> .................AGGTGATAAACTAGAAATACAAAGCTTATATGG
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               501    -    551
RU06135        --> GGGG---CTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- GGGG-GGCTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
RH25AC28       <-- GGGG---CTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
ET0148346      <-- GGGG-GGCTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
CT0060752      <-- GGGG---CTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
ET0148169      <-- GGGGGGGCTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
CT0130674      <-- GGCG---GTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
CT0133355      <-- GGGG---CTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
CT0135515      <-- GGGG---CTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> GGGG---CTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
CT0032633      --> GGGG---CTTTAG.....................................
ET0049183      --> GGGGGGGCTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
CT0022805      --> GGGG-GGCTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
CT0036609      --> ...G---CTTTAGGGATCCTCTTAGTATTCTATGATTAGTCCTCCCATTG
CT0042620      --> .............................................CATTG
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               551    -    601
RU06135        --> GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
RH25AC28       <-- GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
ET0148346      <-- GTGCCC-TGTGGGG-AATTCCCCTTCCTCCTCTTGGCCGTCCGGTAGTTG
CT0060752      <-- GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
ET0148169      <-- GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
CT0130674      <-- GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
CT0133355      <-- GTGCCCCTGTGGGGGAATTCCCCTTCCTCCTCTTGGCCGTCCGGTAGTTG
CT0135515      <-- GTGCCCCTGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
ET0036444      <-- .....................................CGTCCGGTAGTTG
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> GTGCCC-T..........................................
CT0032633      --> ..................................................
ET0049183      --> GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
CT0022805      --> GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
CT0036609      --> GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
CT0042620      --> GTGCCC-TGTGGGG-AATTCCC-TTCCTCCTCTTGGCCGTCCGGTAGTTG
CT0049709      --> ......................................GTCCGGTAGTTG
ET0030897      --> ..............................................GTTG
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               601    -    651
RU06135        --> TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- TTGGAA............................................
RH25AC28       <-- TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
ET0148346      <-- TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0060752      <-- TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACT.......
ET0148169      <-- TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0130674      <-- TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0133355      <-- TTGGAAGTTGGGGGGTGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0135515      <-- TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
ET0036444      <-- TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0022805      --> TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0036609      --> TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0042620      --> TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0049709      --> TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
ET0030897      --> TTGGAAGTTGGGGG-TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0022857      --> ...............TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0039974      --> ...............TGGTGTTGATGGCGAGAAGCTCTGAACTTTGTTGT
CT0042316      --> .................................GCTCTGAACTTTGTTGT
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               651    -    701
RU06135        --> TGGAGAACCTTCCATGGCTGCTGCTGCTGCTGTATGAGTCCTCAGAGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- TGGAGAACCTTCCATGGCTGCTACTGCTGCTGTATGAGTCCTCGGAGTCG
ET0148346      <-- TGGAGAACCTTCCATGGCTGCTGCTGCTGCTGTATGAGTCCTCAGAGTCG
CT0060752      <-- ..................................................
ET0148169      <-- TGGAGAACCTTCCATG..................................
CT0130674      <-- TGGAGAACCTTCCATGGCTGCTGC..........................
CT0133355      <-- TGGAGAACCTTCCATGGCTGCTGC..........................
CT0135515      <-- TGGAGAACCTTCCATGGC................................
ET0036444      <-- TGGAGAACCTTCCATGGCTGCTGCTGCTGCTGTATGAGTCCTCAGAGTCG
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> TGGAGAACCTTCCATGGCTGCTGCTG........................
CT0022805      --> TGGAGAACCTTCCATG..................................
CT0036609      --> TGGAGAACCTTCCATGGCTGCTGCTGCTGCTGTATGAGTCCTCAGAGTCG
CT0042620      --> TGGAGAACCTTCCATGGCTGCTGCTGCTGCTGTATGAGTCCTCAGAGTCG
CT0049709      --> TGGAGAACCTTCCATGGCTGCTGCTGCTGCTGTATGAGTCCTCAGAGTCG
ET0030897      --> TGGAGAACCTTCCATGGCTGCTGCTGCTGCTGTATGAGTCCTCAGAGTCG
CT0022857      --> TGGAGAACCTTCCATG..................................
CT0039974      --> TGGAGAACCTTCCATG..................................
CT0042316      --> TGGAGAACCTTCCATGGCTGCTGCTGCTGCTGTATGAGTCCTCAGAGTCG
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               701    -    751
RU06135        --> GAACCCATTAGCCTGGCTCTCATTTTCTTTAGTGGATTCTGGGAAGTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- GAACCCATTAGCCTGGCTCTCATTTTCTTTAGTGGATTCTGGGAAGT...
ET0148346      <-- G.................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- GAACCCATTAGCCTGGCTCTCATTTTCTTTAGTGGATTCTGGGAAGTACC
RH10F128       <-- ...............................................ACC
RH46BM78       <-- ...............................................ACC
ET0103580      <-- ............................................acccca
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> GAACCCATTAGCCTGGCTCTCATTTTCTTTAGTGGATTCTGGGAAGTACC
CT0042620      --> GAACCCATTAGCCTGGCTCTCATTTTCTTTAGTGGATTCTG.........
CT0049709      --> GAACCCATTAGCCTGGCTCTCATTTTCTTTAGTGGATTCTGGGAAGTACC
ET0030897      --> GAACCCATTAGCCTGGCTCTCATTTTCTTTAGTGGATTCTGGGAAGTACC
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> GAACCCATTAGCCTGGCTCTCATTTTCTTTAGTGGATTCTGGGAAGTACC
ET0128600      --> ...CCCATTAGCCTGGCTCTCATTTTCTTTAGTGGATTCTGGGAAGTACC
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               751    -    801
RU06135        --> CACAATCTTGCAACCAAGAGAGCAGAACCTGAACGAATCAAGAAGGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- CACAATCTTGCAACCAAGAGAGCAGAACCTGAACGAATCAAGAA......
RH10F128       <-- CACAATCTTGCAACCAAGAGAGCAGAACCTGAACGAATCAAGAAGGCTTC
RH46BM78       <-- CACAATCTTGCAACCAAGAGAGCAGAACCTGAACGAATCAAGAAGGCTTC
ET0103580      <-- ccaAATCTTGCAACCAAGAGAGCAGAATCTGAACGAATCAAGAAGGCTTC
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> CA................................................
CT0042620      --> ..................................................
CT0049709      --> CA................................................
ET0030897      --> CACAATCTTGCAACCAAGAGAGCAGAACCTGAACGAATCAA.........
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> CACAATCTgaaattgatgacattcaa........................
ET0128600      --> CACAATCTTGCAACCAAGAGAGCAGAACCTGA-CGAATCAAGAAGGCTTC
ET0145141      --> ..................................GAATCAAGAAGGCTTC
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               801    -    851
RU06135        --> GCTCACAGACTTCACAGGTATTGGTGACTCCTTTCCCGGGCC-TAGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- GCTCACAGACTTCACAGGTATTGGTGACTCCTTTCCCGGGCC-TAGGCTG
RH46BM78       <-- GCTCACAGACTTCACAGGTATTGGTGACTCCTTTCCCGGGCC-TAGGCTG
ET0103580      <-- GCTCACAGACTTCACAGGTATTGGTGACTCCTTTCCCGGGCCCTAGGCTG
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> GCTCACAGACTTCACAGGTATTGGTGACTCCTTTCCCGGGCC-TAGGCTG
ET0145141      --> GCTCACAGACTTCACAGGTATTGGTGACTCCTTTCCCGGGCC-TAGGCTG
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               851    -    901
RU06135        --> AGGCCTCTCATTCAAGAAAACGACTCGAGCACTATTAATAATGTAGGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- AGGCCTCTCATTCAAGAAAACGACTCGAGCACTATTAATAATGTAGGTCT
RH46BM78       <-- AGGCCTCTCATTCAGGAAAACGACTCGAGCACTATTAATAATGTAGGTCT
ET0103580      <-- AGGCCTCTCATTCAGGAAAACGACTCGAGCACTGTTAATAATGTAGGTCT
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> AGGCCTCTCATTCAAGAAAACGACTCGAGCACTATTAATAATGTAGGTCT
ET0145141      --> AGGCCTCTCATTCAAGAAAACGACTCGAGCACTATTAATAATGTAGGTCT
CT0108915      --> ....agttacatgccgattctcACTCGAGCACTATTAATAATGTAGGTCT
ET0078794      --> ....................................AATAA-GTAGGTCT
ET0074426      --> .........................................TGTAGGTCT
ET0079973      --> .........................................TGTAGGTCT
ET0107824      --> .........................................TGTAGGTCT
ET0103091      --> .....................................ttgttaggttctT
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               901    -    951
RU06135        --> GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
RH46BM78       <-- GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
ET0103580      <-- GGACTCCAGTGATGTCGAGATGCTTCTGAATCTCATTCACT.........
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> GGACTCCGGTGATGTCGAGATGCTT.........................
ET0145141      --> GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
CT0108915      --> GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
ET0078794      --> GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
ET0074426      --> GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
ET0079973      --> GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
ET0107824      --> GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
ET0103091      --> GGACTCCGGTGATGTCGAGATGCTTCTGAATCTCATTCACTCTAATCACA
ET0043278      --> ..................................ATTCACTCTAATCACA
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               951    -   1001
RU06135        --> TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
RH46BM78       <-- TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
CT0108915      --> TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
ET0078794      --> TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
ET0074426      --> TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
ET0079973      --> TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
ET0107824      --> TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
ET0103091      --> TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
ET0043278      --> TCATGGTATGAAGACCTCCTTATCTGAATAGCACGATGGTCCTTGTGGTA
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               1001   -   1051
RU06135        --> GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGT..
RH46BM78       <-- GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGT..
ET0103580      <-- ..................................................
CT0073684      <-- .....................................ATCCAAGCAGTAC
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGTAC
CT0108915      --> GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGTAC
ET0078794      --> GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGTAC
ET0074426      --> GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGTAC
ET0079973      --> GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGTAC
ET0107824      --> GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGTAC
ET0103091      --> GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGTAC
ET0043278      --> GGCAAGGCAGAGAGAGCAGAGAGGGCCATTCATAC-AATCCAAGCAGTAC
ET0005274      --> ......................ggtCCATTCATAC-AATCCAAGCAGTAC
ET0013716      --> ......................ggtCCATTCATAC-AATCCAAGCAGTAC
ET0018454      --> .....................ggtcctATTCATAC-AATCCAAGCAGTAC
ET0013277      --> ............................TTCATAC-AATCCAAGCAGTAC
ET0034952      --> ............................TTCATACGAATCCAAGCAGTAC
ET0039704      --> ....................gtctattcgatacgaataccgAAGCAGTAC
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               1051   -   1101
RU06135        --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
CT0136599      <-- ....................................CTTGCAATGAA-CA
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ATATTGCATTCACT....................................
CT0108915      --> ATATTGCATTCA......................................
ET0078794      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAAaca
ET0074426      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA...
ET0079973      --> ATATTGCATTCACTCTTGTGAAGAATCGGCATGTAACT-GCAATGAAACA
ET0107824      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAAaca
ET0103091      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0043278      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0005274      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0013716      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0018454      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0013277      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0034952      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0039704      --> ATATTGCATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0036300      --> ......CATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0049652      --> ......CATTCACTCTTGTGA-GAATCGGCATGTAACTTGCAATGAA-CA
ET0082676      --> .............................................AA-CA
ET0115074      --> ..................................................

               1101   -   1151
RU06135        --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGAGGCCACCTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- AAGAAAGCTCTCTTTGAGCAGAGGCTTCAGCCATGGTGGCCACCTGTTGT
CT0136599      <-- AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGTGGCCACCTGTTGT
ET0087220      <-- ..............................CCATGGCGGCCACCTGTTGT
ET0139306      <-- ..............................CCATGGCGGCCACCTGTTGT
ET0104410      <-- .......................................cgACCTGTTGT
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> aa................................................
ET0074426      --> ..................................................
ET0079973      --> AAG...............................................
ET0107824      --> aa................................................
ET0103091      --> AAG...............................................
ET0043278      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGTGGCCACCTGTTcg
ET0005274      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGAGGCCACCTGTTGT
ET0013716      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGAGGCCACCTGTTGT
ET0018454      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGAGGCCACCTGTTGT
ET0013277      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGTGGCCACCTGTTGT
ET0034952      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGTGGCCACCTGTTGT
ET0039704      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGAGGCCACCTGTTGT
ET0036300      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGTGGCCACCTGTTGT
ET0049652      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGTGGCCACCTGTTGT
ET0082676      --> AAGAA-GCTCTCTTTGAGCAGAGGCTTCAGCCATGGTGGCCACCTGTTGT
ET0115074      --> ..................................................

               1151   -   1201
RU06135        --> CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
CT0136599      <-- CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
ET0087220      <-- CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
ET0139306      <-- CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
ET0104410      <-- CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
ET0082773      <-- ..........................ATGATTCTCCTACTCTTGGGCTTG
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- ..................................................
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> CTTCCTCATCAGGACCTCCAGCA...........................
ET0013716      --> CTTCCTCATCAGGACCTCCAGCA...........................
ET0018454      --> CTTCCTCATCAGGACCTCCAGC............................
ET0013277      --> CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
ET0034952      --> CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
ET0039704      --> CTTCCTCATCAGGACCTCagca............................
ET0036300      --> CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
ET0049652      --> CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
ET0082676      --> CTTCCTCATCAGGACCTCCAGCACCCATGATTCTCCTACTCTTGGGCTTG
ET0115074      --> .....................CACCCATGATTCTCCTACTCTTGGGCTTG

               1201   -   1251
RU06135        --> ATTT-CTCTGACACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ATTT-CTCTGACACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAAA
CT0136599      <-- ATTT-CTCTGACACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
ET0087220      <-- ATTT-CTCTGACACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
ET0139306      <-- ATTT-CTCTGACACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
ET0104410      <-- ATTT-CTCTGACACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
ET0082773      <-- ATTT-CTCTGACACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
ET0084398      <-- ............ACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
ET0097151      <-- ............ACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
CT0041866      <-- ................CTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ATTT-CTCTGACACCACTGTCCTGGTTCTCG...................
ET0034952      --> ATTT-CTCTGACACCACTGTCCTGGTTCTC....................
ET0039704      --> ..................................................
ET0036300      --> ATTTTCTCTGACACCACTGTCCTGGTTCT.....................
ET0049652      --> ATTT-CTCTGACACCACTGTCCTGGTTCTCG...................
ET0082676      --> ATTT-CTCTGACACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-
ET0115074      --> ATTT-CTCTGACACCACTGTCCTGGTTCTCGATCGCCAGCTTGAACAAA-

               1251   -   1301
RU06135        --> CCGAAAGAAA-CACTGTTTTGCTCAATGTTGAAACACAACGAAAGCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- CCGAAA............................................
CT0136599      <-- CCGAAAGAAA-CACTGTTTTGCTCAATGTTGAAACACAACGAAAGCAGTG
ET0087220      <-- CCGAAAGAAA-CACTGTTTTGCTCAATGTCGAAACACAACGAAAGCAGTG
ET0139306      <-- CCGAAAGAAA-CACTGTTTTGCTCAATGTCGAAACACAACGAAAGCAGTG
ET0104410      <-- CCGAAAGAAA-CACTGTTTTGCTCAATGTTGAAACACAACGAAAGCAGTG
ET0082773      <-- CCGAAAGAAA-CACTGTTTTGCTCAATGTTGAAACACAACGAAAGCAGTG
ET0084398      <-- CCGAAAGAAA-CACTGTTTTGCTCAATGTTGAAACACAACGAAAGCAGTG
ET0097151      <-- CCGAAAGAAA-CACTGTTTTGCTCAATGTTGAAACACAACGAAAGCAGTG
CT0041866      <-- CCGAAAGAAAACACTGTTTTGCTCAATGTTGAAACACAACGAAAGCAGTG
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> CCGAAAGAAA-CACTGTTTTGCTCAATGTTG...................
ET0115074      --> CCGAAAGAAA-CACTGTTTTGCTCAATGTTGAAACACAACGAAAGCAGTG

               1301   -   1351
RU06135        --> TAAGAAACAGAGACTCAATGCAAGAAAAGGCAAAGGCTTT-GAGCTCTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- TAAGAAACAGAGACTCAATGCAAGAAAAGGCGAAGGCTTTTGAGCTCTAG
ET0087220      <-- TAAGAAACAGAGACTCAATGCAAGAAAAGGCAAAGGCTTT-GAGCTCTAG
ET0139306      <-- TAAGAAACAGAGACTCAATGCAAGAAAAGGCAAAGGCTTT-GAGCTCTAG
ET0104410      <-- TAAGAAACAGAGACTCAATGCAAGAAAAGGCTAAGGCTTT-GAGCTCTAG
ET0082773      <-- TAAGAAACAGAGACTCAATGCAAGAAAAGGCTAAGGCTTT-GAGCTCTAG
ET0084398      <-- TAAGAAACAGAGACTCAATGCAAGAAAAGGCGAAGGCTTTTGAGCTCTAG
ET0097151      <-- TAAGAAACAGAGACTCAATGCAAGAAAAGGCGAAGGCTTTTGAGCTCTAG
CT0041866      <-- TAAGAAACAGAGACTCAATGCAAGAAAAGGCTAAGGCTTT-GAGCTCTAG
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> TAAGAAACAGAGACTCAATGCAAGAAAAGGCTAAGGCTTT-GAGCTCT..

               1351   -   1401
RU06135        --> AGAAAGAAAAAGAGAGACGAGTTTTTTAGGTTAATAGAGAAGAAGAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- AGAAAGAAAAAGAGAGACGAGTTTCTTAGGTTAATAGAGAAGAAGAG...
ET0087220      <-- AGAAAGAAAAAGAGAGACGAGTTTTTT.......................
ET0139306      <-- AGAAAGAAAAAGAGAGACG...............................
ET0104410      <-- AGAAAGAAAAAGAGAGACGAGTTTTTTAGGTTAATAGAGAAGAAG.....
ET0082773      <-- AGAAAAAAAA........................................
ET0084398      <-- AGAAAGAAAAAGAGAGACGAGTTTCTTA......................
ET0097151      <-- AGAAAGAAAAAGAGAGACGAGTTTCTTA......................
CT0041866      <-- AGAAAGAAAAAGAGAGACGAGTTTTTTAGGTTAATAGAGAAGAAGAGAAA
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               1401   -   1451
RU06135        --> AAAAGAGTGGAGGCGGTGTGGGAGGGAATGGGTTCTTGTATAGGAGTGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ..................................................
ET0030490      <-- ..................................................
ET0044605      <-- ..................................................
ET0054506      <-- ..................................................
CT0045837      <-- ..................................................
CT0021528      <-- ..................................................
CT0006370      <-- ..................................................
CT0040062      <-- ..................................................
CT0048277      <-- ..................................................
ET0053310      <-- ..................................................
RH25AC28       <-- ..................................................
ET0148346      <-- ..................................................
CT0060752      <-- ..................................................
ET0148169      <-- ..................................................
CT0130674      <-- ..................................................
CT0133355      <-- ..................................................
CT0135515      <-- ..................................................
ET0036444      <-- ..................................................
RH10F128       <-- ..................................................
RH46BM78       <-- ..................................................
ET0103580      <-- ..................................................
CT0073684      <-- ..................................................
CT0136599      <-- ..................................................
ET0087220      <-- ..................................................
ET0139306      <-- ..................................................
ET0104410      <-- ..................................................
ET0082773      <-- ..................................................
ET0084398      <-- ..................................................
ET0097151      <-- ..................................................
CT0041866      <-- AAAAGAGTGGAGGCGGTGTGGGAGGGAATGGGTTCTTGTATAGGAGTGCG
CT0128438      --> ..................................................
ET0036876      --> ..................................................
ET0084825      --> ..................................................
ET0109126      --> ..................................................
ET0009421      --> ..................................................
ET0010655      --> ..................................................
ET0138674      --> ..................................................
ET0139212      --> ..................................................
ET0139912      --> ..................................................
ET0139992      --> ..................................................
ET0140859      --> ..................................................
CT0020767      --> ..................................................
CT0090943      --> ..................................................
ET0129257      --> ..................................................
ET0136003      --> ..................................................
CT0103571      --> ..................................................
CT0032633      --> ..................................................
ET0049183      --> ..................................................
CT0022805      --> ..................................................
CT0036609      --> ..................................................
CT0042620      --> ..................................................
CT0049709      --> ..................................................
ET0030897      --> ..................................................
CT0022857      --> ..................................................
CT0039974      --> ..................................................
CT0042316      --> ..................................................
ET0128600      --> ..................................................
ET0145141      --> ..................................................
CT0108915      --> ..................................................
ET0078794      --> ..................................................
ET0074426      --> ..................................................
ET0079973      --> ..................................................
ET0107824      --> ..................................................
ET0103091      --> ..................................................
ET0043278      --> ..................................................
ET0005274      --> ..................................................
ET0013716      --> ..................................................
ET0018454      --> ..................................................
ET0013277      --> ..................................................
ET0034952      --> ..................................................
ET0039704      --> ..................................................
ET0036300      --> ..................................................
ET0049652      --> ..................................................
ET0082676      --> ..................................................
ET0115074      --> ..................................................

               1451   -   1501
RU06135        --> TTAGAGAGAGAAGAGAATAGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~
CT0069014      <-- ........................
ET0030490      <-- ........................
ET0044605      <-- ........................
ET0054506      <-- ........................
CT0045837      <-- ........................
CT0021528      <-- ........................
CT0006370      <-- ........................
CT0040062      <-- ........................
CT0048277      <-- ........................
ET0053310      <-- ........................
RH25AC28       <-- ........................
ET0148346      <-- ........................
CT0060752      <-- ........................
ET0148169      <-- ........................
CT0130674      <-- ........................
CT0133355      <-- ........................
CT0135515      <-- ........................
ET0036444      <-- ........................
RH10F128       <-- ........................
RH46BM78       <-- ........................
ET0103580      <-- ........................
CT0073684      <-- ........................
CT0136599      <-- ........................
ET0087220      <-- ........................
ET0139306      <-- ........................
ET0104410      <-- ........................
ET0082773      <-- ........................
ET0084398      <-- ........................
ET0097151      <-- ........................
CT0041866      <-- TTAGAGAGAGAAGAGAATAGAGAT
CT0128438      --> ........................
ET0036876      --> ........................
ET0084825      --> ........................
ET0109126      --> ........................
ET0009421      --> ........................
ET0010655      --> ........................
ET0138674      --> ........................
ET0139212      --> ........................
ET0139912      --> ........................
ET0139992      --> ........................
ET0140859      --> ........................
CT0020767      --> ........................
CT0090943      --> ........................
ET0129257      --> ........................
ET0136003      --> ........................
CT0103571      --> ........................
CT0032633      --> ........................
ET0049183      --> ........................
CT0022805      --> ........................
CT0036609      --> ........................
CT0042620      --> ........................
CT0049709      --> ........................
ET0030897      --> ........................
CT0022857      --> ........................
CT0039974      --> ........................
CT0042316      --> ........................
ET0128600      --> ........................
ET0145141      --> ........................
CT0108915      --> ........................
ET0078794      --> ........................
ET0074426      --> ........................
ET0079973      --> ........................
ET0107824      --> ........................
ET0103091      --> ........................
ET0043278      --> ........................
ET0005274      --> ........................
ET0013716      --> ........................
ET0018454      --> ........................
ET0013277      --> ........................
ET0034952      --> ........................
ET0039704      --> ........................
ET0036300      --> ........................
ET0049652      --> ........................
ET0082676      --> ........................
ET0115074      --> ........................