SNPs of unigene RU06224
               1      -     51
RU06224        --> TTTTTTTTTAT-GCAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- TTTTTTTTTATTGCAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
CT0045364      <-- ............GCAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
ET0003362      <-- ............GCAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
ET0003970      <-- ............GCAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
RH18Q96        <-- ..........acGCAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
CT0054765      <-- .............CAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
ET0003714      <-- ...........gtCAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
CT0074955      <-- .................................................C
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..TTTTTTTTT-GCAGGGAAAAGATGG-CAACTTTTATTCCTGAGAAATC
CT0014753      --> .........AT-GCAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
CT0100551      --> .........AT-GCAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
RH47BP50       --> ............GCAGG-AAAAAATGG-CAACTTTTATTCCTGAAAAATC
RH47BP7        --> ............GCAGG-AAAAAATGG-CAACTTTTATTCCTGAAAAATC
ET0003604      --> .............CAGG-AAAAGATGG-CAACTTTTATTCCTGAGAAATC
CT0069171      --> .................ggAAAGATGGGCAACTTTTATTCCTGAGAAATC
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               51     -    101
RU06224        --> AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCACGGTTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
CT0045364      <-- AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
ET0003362      <-- AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
ET0003970      <-- AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
RH18Q96        <-- AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
CT0054765      <-- AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
ET0003714      <-- AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
CT0074955      <-- AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
CT0014753      --> AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
CT0100551      --> AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
RH47BP50       --> AAAACAACTACAATGGTTACTCTACTTATTTCCCCTAACACGGTTTCTCC
RH47BP7        --> AAAACAACTACAATGGTTACTCTACTTATTTCCCCTAACACGGTTTCTCC
ET0003604      --> AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCACGGTTTCTCC
CT0069171      --> AGAACAACTACAATGGTTACTCTACTTATTTCCCCTAGCATGGTTTCTCC
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               101    -    151
RU06224        --> TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
CT0045364      <-- TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
ET0003362      <-- TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
ET0003970      <-- TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
RH18Q96        <-- TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
CT0054765      <-- TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
ET0003714      <-- TCTATTTTACAAACCAACCACATCATTCTTCAAA................
CT0074955      <-- TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
CT0073805      <-- .....................ATCATTCTTCAAATACATAAAACTACCAC
CT0124168      <-- ..........................ctTTCAAATACATAAAACT-CCAC
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
CT0014753      --> TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
CT0100551      --> TCTATTTTACAAACCAA.................................
RH47BP50       --> TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
RH47BP7        --> TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
ET0003604      --> TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
CT0069171      --> TCTATTTTACAAACCAACCACATCATTCTTCAAATACATAAAACT-CCAC
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               151    -    201
RU06224        --> AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAATTCTTGATACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- AACCATCACTAACCCGATGAAAACCTCCTAGC..................
CT0045364      <-- AAac..............................................
ET0003362      <-- AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAATTCTTG.....
ET0003970      <-- AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAATTCTTG.....
RH18Q96        <-- AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAATTCTTGATACC
CT0054765      <-- AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAATTCTTGATACC
ET0003714      <-- ..................................................
CT0074955      <-- AACCA.............................................
CT0073805      <-- AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAATTCTT......
CT0124168      <-- AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAATTCTTGATACC
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAATTCTTGATACC
CT0014753      --> AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAA...........
CT0100551      --> ..................................................
RH47BP50       --> AACCATCACTAACCCGATGAAAACCTCCTAACAACTAAATTCTTGATACC
RH47BP7        --> AACCATCACTAACCCGATGAAAACCTCCTAACAACTAAATTCTTGATACC
ET0003604      --> AACCATCACTAACCCGATGAAAA...........................
CT0069171      --> AACCATCACTAACCCGATGAAAACCTCCTAGCAACTAAATTCTTG.....
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               201    -    251
RU06224        --> AGGTTACTTAAACTTGGATTTCTACTAGCCATTTATACATATCCTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- AGGTTACTTAAACTTGGATTTCTACTAGCCATTTATACATATCCTCTTTT
CT0054765      <-- AGGTTACTTAAACTTGGATTTCTACTAGCCATTTATACATATCCTC....
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- AGGTTACTTAAACTTGGATTTCTACTAGCCATTTATACATATCCTCTTTT
ET0092249      <-- ............................CCATTTATACATATCCTCTTTT
CT0109155      <-- ......................................ATATCCTCTTTT
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> AGGTTACTTAAACTTGGATTTCTACTAGCCATTTATACATATCCTCTTTT
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> AGGTTACCTAAACTTGGATTTCTACTAACCATTTATACATATCCTCTTTT
RH47BP7        --> AGGTTACCTAAACTTGGATTTCTACTAACCATTTATACATATCCTCTTTT
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               251    -    301
RU06224        --> GGGATAGGGATGGTAAAGGTTAGTAATCCAGTTGCAGGGTCATATTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- GGGATAGGGATGGTAAAGGTTAGTAATCCAGTTGCAGGGTCATATTCAAA
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- GGGATAGGGATGGTAAAGGTTAGTAATCCAGTTGCAGGGTCATATTCAAA
ET0092249      <-- GGGATAGGGATGGTAAAGGTTAGTAATCCAGTTGCAGGGTCATATTCAAA
CT0109155      <-- GGGATAGGGATGGTAAAGGTTAGTAATCCAGTTGCAGGGTCATATTCAAA
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> GGGATAGGGATGGTAAAGGTTA............................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> G.................................................
RH47BP7        --> G.................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               301    -    351
RU06224        --> GTCCGTCTCAACTCTATCAACGGTACACTTCAGGGGACG-CTGAGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- GTCCGTCTCAACTCTATCAACGGT..........................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- GTCCGTCTCAACTCTATCAACGGTACACTTCAGGGGACG-CTGAGAAGAG
ET0092249      <-- GTCCGTCTCAACTCTATCAACGGTACACTTCAGGGGACG-CTGAGAAGAG
CT0109155      <-- GTCCGTCTCAACTCTATCAACGGTACACTTCAGGGGACG-CTGAGAAGAG
ET0045972      <-- ..............TATCAACGGTACACTTCAGGGGACGGCTGAGAAGAG
CT0107164      <-- ................TCAACGGTACACTTCAGGGGACG-CTGAGAAGAG
RH13K34        <-- ........................ACACTTCAGGGGACG-CTGAGAAGAG
RH22V72        <-- ........................ACACTTCAGGGGACG-CTGAGAAGAG
RH53BZ91       <-- ........................ACACTTCAGGGGACG-CTGAGAAGAG
CT0071796      <-- .............................................AAGAG
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ........................ACACTTCAGGGGACG-CTGAGAAGAG
RH24AB11       --> ........................ACACTTCAAGGGACG-CTGAGAAGAG
RH36AJ46       --> ........................ACACTTCAGGGGACG-CTGAGAAGAG
RH55CB96       --> ........................ACACTTCAGGGGACG-CTGAGAAGAG
CT0018531      --> ...........................................AGAAGAG
CT0049958      --> ...........................................AGAAGAG
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               351    -    401
RU06224        --> TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATGGTGACTGTGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATGGTGACTGTG...
ET0092249      <-- TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATAGTGACTGTGGCA
CT0109155      <-- TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATAGTGACTGTGGCA
ET0045972      <-- TAAGCTCCAAACCTTACCACATCCTCTGGTTTTGTATAGTGACTGTGGCA
CT0107164      <-- TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATGGTGACTGTGGCA
RH13K34        <-- TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATAGTGACTGTGGCA
RH22V72        <-- TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATAGTGACTGTGGCA
RH53BZ91       <-- TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATGGTGACTGTGGCA
CT0071796      <-- TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATAGTGACTGTGGCA
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATGGTGACTGTGGCA
RH24AB11       --> TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATGGTGACTGTGGCA
RH36AJ46       --> TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATGGTGACTGTGGCA
RH55CB96       --> TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATAGTGACTGTGGCA
CT0018531      --> TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATGGTGACTGTGGCA
CT0049958      --> TAAGCTCCAAACCTT-CCACATCCTCTGGTTTTG-ATGGTGACTGTGGCA
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               401    -    451
RU06224        --> GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
CT0109155      <-- GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
ET0045972      <-- GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
CT0107164      <-- GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
RH13K34        <-- GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
RH22V72        <-- GTTGAGGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
RH53BZ91       <-- GTTGAAGATCTATTCACACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
CT0071796      <-- GTTGA.............................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
RH24AB11       --> GTTAAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
RH36AJ46       --> GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
RH55CB96       --> GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
CT0018531      --> GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
CT0049958      --> GTTGAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
CT0024263      --> ..taAAGATCTATTCTCACTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
CT0066349      --> ..................CTGAGAGAAGTGGTAAGCTCCGAAGAAACTTC
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               451    -    501
RU06224        --> GCCGTCAGAAGCCAGATGGATTACAACATGCTCCATAGCACCACTGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- GCCGTCAGAAGCCAGATGGATTACA.........................
CT0109155      <-- GCCGTCAGAA........................................
ET0045972      <-- GCCGTCAGAAGCCAGATGGATTACAACATGCTCCATAGCACCACTGGAGT
CT0107164      <-- GCCGTCAGAAGCCAGATGGATTACAACATGCTCCACAGCACCACTGGAGT
RH13K34        <-- GCCGTCAGAAGCCAGATGGATTACAACATGCTCCATAGCACCACTGGAGT
RH22V72        <-- GCCGTCAGAAGCCAGATGGATTACAACATGCTCCATAGCACCACTGGAGT
RH53BZ91       <-- GCCGTCAGAAGCCAGATGGATTACAACATGCTCCACAGCACCACTGGAGT
CT0071796      <-- ..................................................
CT0078018      <-- ...................ATTACAACATGCTCCACAGCACCACTGGAGT
CT0100300      <-- ......................................CACCACTGGAGT
CT0105678      <-- ......................................CACCACTGGAGT
CT0105749      <-- ......................................CACCACTGGAGT
CT0105966      <-- ......................................CACCACTGGAGT
CT0106030      <-- ......................................CACCACTGGAGT
CT0106521      <-- ......................................CACCACTGGAGT
CT0107035      <-- ......................................CACCACTGGAGT
CT0107589      <-- ......................................CACCACTGGAGT
CT0108003      <-- ......................................CACCACTGGAGT
CT0108011      <-- ......................................CACCACTGGAGT
CT0106638      <-- .......................................ACCACTGGAGT
CT0107858      <-- ........................................CCACTGGAGT
CT0107822      <-- .........................................CACTGGAGT
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> GCCGTCAGAAGCCAGATGGATTACAACATGCTCCACAGCACCACTGGAGT
RH24AB11       --> GCCGTCAGAAGCCAGATGGATTACAACATGCTCCACAGCACCACTGGAGT
RH36AJ46       --> GCCGTCAGAAGCCAGATGGATTACAGCATGCTCCACAGCACCACTGGAGT
RH55CB96       --> GCCGTCAGAAGCCAGATGGATTACAACATGCTCCATAGCACCACTGGAGT
CT0018531      --> GCCGTCAGAAGCCAGATGGATTACAACATGCTCCACAGCACCACTGGAGT
CT0049958      --> GCCGTCAGAAGCCAGATGGATTACAACATGCTCCACAGCACCACTGGAGT
CT0024263      --> GCCGTCAGAAGCCAGATGGATTACAACATGCTCCACAGCACCACTGGAGT
CT0066349      --> GCCGTCAGAAGCCAGATGGATTACAACATGCTCCATAGCACCACTGGAGT
CT0025273      --> ...............ATGGATTACAACATGCTCCACAGCACCACTGGAGT
ET0031253      --> ........................AACATGCTCCACAGCACCACTGGAGT
ET0122830      --> ............................TGCTCCACAGCACCACTGGAGT
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               501    -    551
RU06224        --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTT...
CT0107164      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGG.
RH13K34        <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
RH22V72        <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
RH53BZ91       <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0071796      <-- ..................................................
CT0078018      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0100300      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0105678      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0105749      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0105966      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0106030      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0106521      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0107035      <-- TGAACAT-GTCAAGCAGGCCTATTTGGTAGTC-AAAT--GAGATGTTGGG
CT0107589      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0108003      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0108011      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0106638      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0107858      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0107822      <-- TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
ET0112564      <-- ......T-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
ET0017050      <-- ..................CCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
RH24AB11       --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
RH36AJ46       --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
RH55CB96       --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0018531      --> TGAACATAGTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0049958      --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0024263      --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0066349      --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
CT0025273      --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
ET0031253      --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
ET0122830      --> TGAACAT-GTCAAGCAGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
ET0024995      --> ...............AGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
ET0034967      --> ...............AGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
ET0045176      --> ...............AGGCCTATT-GG-AG-C-AAAT--GAGATGTTGGG
ET0049860      --> ................aGCCTATT-GGGAG-CGAAATAGGAGATGTTGGG
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               551    -    601
RU06224        --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
RH22V72        <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
RH53BZ91       <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0071796      <-- ..................................................
CT0078018      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAA...................
CT0100300      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0105678      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0105749      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0105966      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0106030      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0106521      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0107035      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0107589      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0108003      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0108011      <-- TGTAACCTCCTTGAGAGGACAGAAATAGGAAGAGCT-CATACTCCAGAAC
CT0106638      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0107858      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCTTCATACTCCAGAAC
CT0107822      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
ET0112564      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
ET0017050      <-- TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
RH24AB11       --> TGTAACCTCCTTGAGAGGATAGAAAT-GGAAGAGCT-CATACTCCAGAAC
RH36AJ46       --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
RH55CB96       --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0018531      --> ..................................................
CT0049958      --> T.................................................
CT0024263      --> TGTAA.............................................
CT0066349      --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0025273      --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
ET0031253      --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
ET0122830      --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
ET0024995      --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
ET0034967      --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
ET0045176      --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
ET0049860      --> TGTAACCTCCTTGAGAGGACAGAAAT-GGAAGAGCT-CATACTCCAGAAC
CT0049643      --> .............................AAGAGCT-CATACTCCAGAAC
CT0088742      --> .....................................CATACTCCAGAAC
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               601    -    651
RU06224        --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
RH22V72        <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
RH53BZ91       <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACC.
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0105678      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0105749      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0105966      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0106030      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0106521      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0107035      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0107589      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0108003      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0108011      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0106638      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0107858      <-- TTTTAAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0107822      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
ET0112564      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
ET0017050      <-- TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
RH24AB11       --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
RH36AJ46       --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
RH55CB96       --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> TTT-AAGTGTCACTGG..................................
CT0025273      --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
ET0031253      --> TTT-AAGTGTCACTGGCACTGAAACATCTTTTAGGTAAA-CGAAACACCT
ET0122830      --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
ET0024995      --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAAACGAAACACCT
ET0034967      --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
ET0045176      --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
ET0049860      --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0049643      --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0088742      --> TTT-AAGTGTCACTGGCACTGAAACATCTTTT-GGTAAA-CGAAACACCT
CT0052526      --> .........................ATCTTTT-GGTAAA-CGAAACACCT
CT0030234      --> ...........................CTTTT-GGTAAA-CGAAACACCT
CT0055818      --> ...........................CTTTT-GGTAAA-CGAAACACCT
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               651    -    701
RU06224        --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
RH22V72        <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCCCAATCATCACC
CT0105678      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0105749      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0105966      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0106030      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0106521      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0107035      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0107589      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0108003      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0108011      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0106638      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0107858      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0107822      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
ET0112564      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
ET0017050      <-- CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0128950      <-- ........TTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0029734      <-- .........................TGTTTCTCCATTCC-AATCATCACC
CT0053162      <-- .........................TGTTTCTCCATTCC-AATCATCACC
CT0058554      <-- ...............................TCCATTCC-AATCATCACC
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
RH24AB11       --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
RH36AJ46       --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
RH55CB96       --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> CTCCTGACTT........................................
ET0031253      --> CTCCTGACTTATGGGCATAAACTACTGTTTC...................
ET0122830      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
ET0024995      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
ET0034967      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
ET0045176      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
ET0049860      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0049643      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0088742      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0052526      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0030234      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0055818      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
CT0076977      --> CTCCTGACTTATGGGCATAAACTACTGTTTCTCCATTCC-AATCATCACC
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               701    -    751
RU06224        --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
RH22V72        <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCcg............
CT0105678      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0105749      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCAacg..........
CT0105966      <-- AGC-AATTT-GGG-CAAGGCTATCAAacaatacaaataagacaacg....
CT0106030      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0106521      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0107035      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0107589      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0108003      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0108011      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0106638      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0107858      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0107822      <-- AGC-AATTTTGGG-CAAGGCTATCAACATCAATAGCA-CG..........
ET0112564      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
ET0017050      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0128950      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0029734      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0053162      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0058554      <-- AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0064858      <-- ......TTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
ET0106794      <-- .aatttagggtcgaaggacgTATCAACATCAATAGCA-CGAACAGAACCA
ET0007831      <-- ..........................................CAGAACCA
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
RH24AB11       --> AGC...............................................
RH36AJ46       --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
RH55CB96       --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> AGC-AATTT-GGG-CAAGGCTATCAA........................
ET0024995      --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
ET0034967      --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
ET0045176      --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
ET0049860      --> AGCTAATTT-GGG-CAAGGCTATCAACATCAATAGCAACGAACAGAACCA
CT0049643      --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CG..........
CT0088742      --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0052526      --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0030234      --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0055818      --> AGC-AATTT-GGG-CAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
CT0076977      --> AGC-AATTT-GGGGCAAGGCTATCAACATCAATAGCA-CGAACAGAACCA
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               751    -    801
RU06224        --> GTGAGGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- GTGAGGt...........................................
RH22V72        <-- GTGAGGGT..........................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- GTGAGGGT..........................................
ET0017050      <-- GTGAGGGTACCAGGAGATGC..............................
CT0128950      <-- GTGAGGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
CT0029734      <-- GTGAGGGTACCAGGAGATGCATCATGGATTCGGGTCTTCTTTTCAACCTT
CT0053162      <-- GTGAGGGTACCAGGAGATGCATCATGGATTCGGGTCTTCTTTTCAACCTT
CT0058554      <-- GTGAGGGTACCAGGAGATGCATCATGGATTCGGGTCTTCTTTTCAACCTT
CT0064858      <-- GTGAGGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
ET0106794      <-- GTGAGGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
ET0007831      <-- GTGAGGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
RH28AD375      <-- ........ACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
RH45BR112      <-- ........ACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
RH45BR115      <-- ........ACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> GTGAGGGT..........................................
RH24AB11       --> ..................................................
RH36AJ46       --> GTGAGGGT..........................................
RH55CB96       --> GTGAGGGT..........................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> GTGAGGGTACCAGGAGAT................................
ET0034967      --> GTGAGGGTACCAGGAGATG...............................
ET0045176      --> GTGAGGGTACCAGGAGA.................................
ET0049860      --> GTGAGGGTA.........................................
CT0049643      --> ..................................................
CT0088742      --> GTGAGGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTT........
CT0052526      --> GTGAGGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
CT0030234      --> GTGAGGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCA.....
CT0055818      --> GTGAGGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAA....
CT0076977      --> GTGAGGGT-CCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
ET0071969      --> ....GGGTACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
ET0130715      --> .......TACCAGGAGATGCATCATGGATTCGGGTCTTCTTTTCAACCTT
RH10F73        --> ........ACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
RH12H131       --> ........ACCAGGAGATGCATCATGGATGCGGGTCTTCTTTTCAACCTT
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               801    -    851
RU06224        --> GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
CT0029734      <-- GCACCAACCGGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
CT0053162      <-- GCACCAACCGGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
CT0058554      <-- GCACCAACCGGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
CT0064858      <-- GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
ET0106794      <-- GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
ET0007831      <-- GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
RH28AD375      <-- GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
RH45BR112      <-- GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
RH45BR115      <-- GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
CT0007434      <-- .......................TGAATACACCAACAACACCAGAGCACT
CT0075069      <-- .........................AATACACCAACAACACCAGAGCACT
CT0073215      <-- ..................................ACAACACCAGAGCACT
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
ET0071969      --> GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
ET0130715      --> GCACCAACCGGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
RH10F73        --> GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
RH12H131       --> GCACCAACCAGCCCCTTGACAGTTGAATACACCAACAACACCAGAGCACT
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               851    -    901
RU06224        --> TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTC..........
CT0029734      <-- TGTTC-ACATTCCATATCT...............................
CT0053162      <-- TGTTC-ACATTCCATATCT...............................
CT0058554      <-- TGTTC-ACATTCCATATCT...............................
CT0064858      <-- TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
ET0106794      <-- TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
ET0007831      <-- TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
RH28AD375      <-- TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
RH45BR112      <-- TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
RH45BR115      <-- TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
CT0007434      <-- TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
CT0075069      <-- TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
CT0073215      <-- TGTTCTACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
ET0000736      <-- ................TCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
ET0125833      <-- ................................................TC
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> TGTTC-ACATTCCATAT.................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> TGTTC-ACATTCCATATCTTGAGCAAGCTGGT..................
ET0071969      --> TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
ET0130715      --> TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
RH10F73        --> TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
RH12H131       --> TGTTC-ACATTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
ET0023481      --> .........TTCCATATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
CT0027383      --> ...............ATCTTGAGCAAGCTGGTTCCATCTCTTGCTGGGTC
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               901    -    951
RU06224        --> AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- AGCAAA-GAGACAATCACATGTTGGCCT-CCAGG................
ET0106794      <-- AGCAAA-GAGACAATCACATGTTGGCCTACCAag................
ET0007831      <-- AGCAAA-G..........................................
RH28AD375      <-- AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
RH45BR112      <-- AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
RH45BR115      <-- AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
CT0007434      <-- AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
CT0075069      <-- AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
CT0073215      <-- AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
ET0000736      <-- AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
ET0125833      <-- AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
CT0066798      <-- ........AGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> AGCAAAAGAGACAATCACATGTTGGCCTAC-AGGTAATTGAGCACGGAGG
ET0130715      --> AGCAAA-GAGACAATCACATGTTGGCCTAC-AGGTAATTGAGCACGGAGG
RH10F73        --> AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
RH12H131       --> AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
ET0023481      --> AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
CT0027383      --> AGCAAA-GAGACAATCACATGTTGGCCTACCAGGTAATTGAGCACGGAGG
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               951    -   1001
RU06224        --> ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
RH45BR112      <-- ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAG...............
RH45BR115      <-- ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAG...............
CT0007434      <-- ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
CT0075069      <-- ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
CT0073215      <-- ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
ET0000736      <-- ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
ET0125833      <-- ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
CT0066798      <-- ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
ET0056333      <-- .......................CTTCCTCAAAAGATCGAAGTTGTGGTT
CT0073442      <-- .........................................GTTGTGGTT
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ACAGATCCATCAGGCAGGACCAGtc.........................
ET0130715      --> ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAG...............
RH10F73        --> ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
RH12H131       --> ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
ET0023481      --> ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTGTGGTT
CT0027383      --> ACAGATCCATCAGGCAGGACCAGCTTCCTCAAAAGATCGAAGTTG.....
CT0096604      --> ........................TTCCTCAAAAGATCGAAGTTGTGGTT
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1001   -   1051
RU06224        --> TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- TCCAGGTT..........................................
CT0075069      <-- TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
CT0073215      <-- TCCAGGTTTATCAC-TGACTATTA-GTATTTGTCACATCCACCAATAGAA
ET0000736      <-- TC................................................
ET0125833      <-- TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
CT0066798      <-- TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
ET0056333      <-- TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
CT0073442      <-- TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
CT0112471      <-- ............AC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
CT0114527      <-- .............C-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
CT0101877      <-- .....................................TCCACCAATAGAA
CT0103934      <-- .....................................TCCACCAATAGAA
CT0105155      <-- .....................................TCCACCAATAGAA
CT0105615      <-- .....................................TCCACCAATAGAA
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
RH12H131       --> TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
ET0023481      --> TCCAGGTTTATCAC-TGAC-AT-A-G-ATT....................
CT0027383      --> ..................................................
CT0096604      --> TCCAGGTTTATCAC-TGAC-AT-A-G-ATT-G-CACATCCACCAATAGAA
CT0051881      --> .........ATCACGTGAC-AT-AAG-ATT-G-CACATCCACCAATAGAA
ET0145964      --> .................................actATCCACCAATAGAA
ET0141323      --> .............................................TAGAA
ET0141509      --> .............................................TAGAA
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1051   -   1101
RU06224        --> CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- CGAGC.............................................
CT0073215      <-- CGAGC.............................................
ET0000736      <-- ..................................................
ET0125833      <-- CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0066798      <-- CGAGC.............................................
ET0056333      <-- CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0073442      <-- CGAGC.............................................
CT0112471      <-- CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0114527      <-- CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0101877      <-- CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0103934      <-- CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0105155      <-- CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0105615      <-- CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0091478      <-- .............................ATGTAAACTATGAAACATATC
CT0037322      <-- ............................................aATATC
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
RH12H131       --> CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0051881      --> CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
ET0145964      --> CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
ET0141323      --> CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
ET0141509      --> CGAGCTGCACCATGATAATCCGCTGCTGGATGTAAACTATGAAACATATC
ET0006596      --> ...............TAATCCGCTGCTGGATGTAAACTATGAAACATATC
CT0110591      --> ...................CCGCTGCTGGATGTAAACTATGAAACATATC
CT0114524      --> ...................CCGCTGCTGGATGTAAACTATGAAACATATC
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1101   -   1151
RU06224        --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- CCAGTCTGGTTGCATAAACTCGCCAA........................
CT0066798      <-- ..................................................
ET0056333      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0073442      <-- ..................................................
CT0112471      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0114527      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGAAGTGTTATAAGCCACA
CT0101877      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0103934      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0105155      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0105615      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0091478      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0037322      <-- CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0065424      <-- ................................aA-GTGTTATAAGCCACA
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
RH12H131       --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0051881      --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
ET0145964      --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
ET0141323      --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
ET0141509      --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
ET0006596      --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0110591      --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
CT0114524      --> CCAGTCTGGTTGCATAAACTCGCCAAGGAAAAGA-GTGTTATAAGCCACA
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1151   -   1201
RU06224        --> GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0073442      <-- ..................................................
CT0112471      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0114527      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0101877      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0103934      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0105155      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0105615      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0091478      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0037322      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0065424      <-- GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
ET0002710      <-- .............................ATCCCGTGGGTAGAAGTCATC
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
RH12H131       --> GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0051881      --> GAAGATATATGAATTGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
ET0145964      --> GAAGATATATGAATTGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
ET0141323      --> GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
ET0141509      --> GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
ET0006596      --> GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0110591      --> GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
CT0114524      --> GAAGATATATGAATCGTGTGAGAAGCAGGATCCCGTGGGTAGAAGTCATC
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1201   -   1251
RU06224        --> AGAAGCTCTCACAACGGCAGTCTGCTTAGAACTATATAGCCCATCAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- AGAAGC............................................
CT0073442      <-- ..................................................
CT0112471      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTA................
CT0114527      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTA................
CT0101877      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
CT0103934      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAagta
CT0105155      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
CT0105615      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
CT0091478      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
CT0037322      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
CT0065424      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
ET0002710      <-- AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
ET0113485      <-- ....................TCTGCTTGGAACTATATAGCCCATCAGTGT
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> AGAAGCTCTCACAACGGCAGTCTGCTTAGAACTATATAGCCCATCAGGGT
RH12H131       --> AGAAGCTCTCACAACGGCAGTCTGCTTAGAACTATATAGCCCATCAGGGT
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> AGAAGCT...........................................
CT0051881      --> AGAAGCTCTCACAA....................................
ET0145964      --> AGAAGCTCTCACAACGGCAGTCTGCTTAGAACTATATAGCCCATCAGTGT
ET0141323      --> AGA...............................................
ET0141509      --> AGA...............................................
ET0006596      --> AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
CT0110591      --> AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
CT0114524      --> AGAAGCTCTCACAACAGCAGTCTGCTTGGAACTATATAGCCCATCAGTGT
ET0097162      --> ............AACGGCAGTCTGCTTAGAACTATATAGCCCATCAGTGT
CT0006172      --> .....................................AGCCCATCAGTGT
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1251   -   1301
RU06224        --> TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAAGTTCCGAGCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- TA................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- TAT...............................................
CT0103934      <-- gttaata...........................................
CT0105155      <-- TAT...............................................
CT0105615      <-- TAT...............................................
CT0091478      <-- TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAAGTTCCGAGCAACC
CT0037322      <-- TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAAGTTCCGAGCAACC
CT0065424      <-- TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAAGTTCCGAGCAACC
ET0002710      <-- TATGACACATGCAAGAAATGCATCCGTTGTCAGGAA..............
ET0113485      <-- TATGACACATGCAAGAAATGCATCCGTCGTCAGGAAAGTTCCGAGCAACC
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAAGTTCCGAGCAACC
RH12H131       --> TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAAGTTCCGAGCAACC
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAAGTTCCGAGCAACC
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> TATGACACATGCAAGAAATG..............................
CT0110591      --> TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAA.............
CT0114524      --> TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAAGTTCCG.......
ET0097162      --> TATGGCACATGCAAGAAATGCATCCGTTGTCAGGAAGGTTCCGAGCAACC
CT0006172      --> TATGACACATGCAAGAAATGCATCCGTTGTCAGGAAAGTTCCGAGCAACC
CT0042529      --> ..................TGCATCCGTTGTCAGGAAAGTTCCGAGCAACC
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1301   -   1351
RU06224        --> -GAAGCC-TCCA-GTGCCTGGTGATAGCTTCGGGTCAGAGAAACTCTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- -GA...............................................
CT0037322      <-- CGAAGCCCTCCACGTGCCTG..............................
CT0065424      <-- -GAAGCC-TCCA-GTGCCTGGTGATAGCTTCGGGTCAGAGAGACTCTGCC
ET0002710      <-- ..................................................
ET0113485      <-- -GAAGCC-TCCA-GTGCCTGGTGATAGCTTCGGGTCAGAGAGACTCTGCC
CT0047950      <-- .................CTGGTGATAGCTTCGGGTCAGAGAGACTCTGCC
ET0063565      <-- ......................................tgcgtatttgtc
ET0111287      <-- ..................................................
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> -GAAGCC-TCCA-GTGCCTGGTGATAGCTTCGGGTCAGAGAAACTCTGCC
RH12H131       --> -GAAGCC-TCCA-GTGCCTGGTGATAGCTTCGGGTCAGAGAAACTCTGCC
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> -GA...............................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> -GAAGCC-TCCA-GTGCCTGGTGATAGCTTCGGGTCAGAGAAACTCTGCC
CT0006172      --> -GAAGCC-TCCA-GTGCCTGGTGATAGCTTCGGGTCAGAGAAACTCTGCC
CT0042529      --> -GAAGCC-TCCA-GTGCCTGGTGATAGCTTCGGGTCAGAGAAACTCTGCC
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1351   -   1401
RU06224        --> ACCATGACCAGACCCAAGAGTCTCAATGATGTTCTGTACATCAACCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................  Control
CT0045364      <-- ..................................................  Control
ET0003362      <-- ..................................................  Ethylene
ET0003970      <-- ..................................................  Ethylene
RH18Q96        <-- ..................................................  WaterDS
CT0054765      <-- ..................................................  Control
ET0003714      <-- ..................................................  Ethylene
CT0074955      <-- ..................................................  Control
CT0073805      <-- ..................................................  Control
CT0124168      <-- ..................................................  Control
ET0092249      <-- ..................................................  Ethylene
CT0109155      <-- ..................................................  Control
ET0045972      <-- ..................................................  Ethylene
CT0107164      <-- ..................................................  Control
RH13K34        <-- ..................................................  WaterDS
RH22V72        <-- ..................................................  WaterDS
RH53BZ91       <-- ..................................................  WaterDS
CT0071796      <-- ..................................................  Control
CT0078018      <-- ..................................................  Control
CT0100300      <-- ..................................................  Control
CT0105678      <-- ..................................................  Control
CT0105749      <-- ..................................................  Control
CT0105966      <-- ..................................................  Control
CT0106030      <-- ..................................................  Control
CT0106521      <-- ..................................................  Control
CT0107035      <-- ..................................................  Control
CT0107589      <-- ..................................................  Control
CT0108003      <-- ..................................................  Control
CT0108011      <-- ..................................................  Control
CT0106638      <-- ..................................................  Control
CT0107858      <-- ..................................................  Control
CT0107822      <-- ..................................................  Control
ET0112564      <-- ..................................................  Ethylene
ET0017050      <-- ..................................................  Ethylene
CT0128950      <-- ..................................................  Control
CT0029734      <-- ..................................................  Control
CT0053162      <-- ..................................................  Control
CT0058554      <-- ..................................................  Control
CT0064858      <-- ..................................................  Control
ET0106794      <-- ..................................................  Ethylene
ET0007831      <-- ..................................................  Ethylene
RH28AD375      <-- ..................................................  WaterDS
RH45BR112      <-- ..................................................  WaterDS
RH45BR115      <-- ..................................................  WaterDS
CT0007434      <-- ..................................................  Control
CT0075069      <-- ..................................................  Control
CT0073215      <-- ..................................................  Control
ET0000736      <-- ..................................................  Ethylene
ET0125833      <-- ..................................................  Ethylene
CT0066798      <-- ..................................................  Control
ET0056333      <-- ..................................................  Ethylene
CT0073442      <-- ..................................................  Control
CT0112471      <-- ..................................................  Control
CT0114527      <-- ..................................................  Control
CT0101877      <-- ..................................................  Control
CT0103934      <-- ..................................................  Control
CT0105155      <-- ..................................................  Control
CT0105615      <-- ..................................................  Control
CT0091478      <-- ..................................................  Control
CT0037322      <-- ..................................................  Control
CT0065424      <-- AC................................................  Control
ET0002710      <-- ..................................................  Ethylene
ET0113485      <-- ACCATGACCAGACCCAAGAGTCTCAATGATGTTCTGTACATCAACCTTAA  Ethylene
CT0047950      <-- ACCATGACCAGACCCAAGAGTCTCAATGATGTTCTGTACATCAACCTTAA  Control
ET0063565      <-- ttcctgtggagtggatgGAGTCTCAATGATGTTCTGTACATCAACCTTAA  Ethylene
ET0111287      <-- .........................................CAACCTTAA  Ethylene
ET0120698      <-- ..................................................  Ethylene
ET0090623      --> ..................................................  Ethylene
CT0014753      --> ..................................................  Control
CT0100551      --> ..................................................  Control
RH47BP50       --> ..................................................  WaterDS
RH47BP7        --> ..................................................  WaterDS
ET0003604      --> ..................................................  Ethylene
CT0069171      --> ..................................................  Control
RH15L117       --> ..................................................  WaterDS
RH24AB11       --> ..................................................  WaterDS
RH36AJ46       --> ..................................................  WaterDS
RH55CB96       --> ..................................................  WaterDS
CT0018531      --> ..................................................  Control
CT0049958      --> ..................................................  Control
CT0024263      --> ..................................................  Control
CT0066349      --> ..................................................  Control
CT0025273      --> ..................................................  Control
ET0031253      --> ..................................................  Ethylene
ET0122830      --> ..................................................  Ethylene
ET0024995      --> ..................................................  Ethylene
ET0034967      --> ..................................................  Ethylene
ET0045176      --> ..................................................  Ethylene
ET0049860      --> ..................................................  Ethylene
CT0049643      --> ..................................................  Control
CT0088742      --> ..................................................  Control
CT0052526      --> ..................................................  Control
CT0030234      --> ..................................................  Control
CT0055818      --> ..................................................  Control
CT0076977      --> ..................................................  Control
ET0071969      --> ..................................................  Ethylene
ET0130715      --> ..................................................  Ethylene
RH10F73        --> ACCGTGACCAGACCCAAGAGTC............................  WaterDS
RH12H131       --> ACCGTGACCAGACCCAAGAGTC............................  WaterDS
ET0023481      --> ..................................................  Ethylene
CT0027383      --> ..................................................  Control
CT0096604      --> ..................................................  Control
CT0051881      --> ..................................................  Control
ET0145964      --> ..................................................  Ethylene
ET0141323      --> ..................................................  Ethylene
ET0141509      --> ..................................................  Ethylene
ET0006596      --> ..................................................  Ethylene
CT0110591      --> ..................................................  Control
CT0114524      --> ..................................................  Control
ET0097162      --> ACCATGACCAGACCCAAGAGTCTCAATGATGTTCTGTACATCAACCTTAA  Ethylene
CT0006172      --> ACCATGACCAGACCCAAGAGTCTCAATG......................  Control
CT0042529      --> ACCATGACCAGACCCAAGAGTCTCAATGATGTTCTGTACATCAACCTTAA  Control
RH34AJ115      --> .....................................ACATCAACCTTAA  WaterDS
RH36AJ116      --> .....................................ACATCAACCTTAA  WaterDS
RH49BR167      --> .....................................ACATCAACCTTAA  WaterDS
CT0070892      --> ..................................................  Control

               1401   -   1451
RU06224        --> CTCCATCCACTCCACAGGAAGACAAATACGCATGAAGCTCATTGTAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- CTCCATCCACTCCACAGGAAGACAAATACGCATGAAGCTCATT.......
CT0047950      <-- CTCCATCCACTCCACAGGAAGACAAATACGCATGAAGCTCATTGTAGAAA
ET0063565      <-- CTCCA.............................................
ET0111287      <-- CTCCATCCACTCCACAGGAAGACAAATACGCATGAAGCTCATTGTAGAAA
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> CTCCATCCACTCCACAGGAAGACAAATACGCATGAAGCT...........
CT0006172      --> ..................................................
CT0042529      --> CTCCATCCACTCCA....................................
RH34AJ115      --> CTCCATCCACTCCACAGGAAGACAAATACGCATGAAGCTCATTGTAGAAA
RH36AJ116      --> CTCCATCCACTCCACAGGAAGACAAATACGCATGAAGCTCATTGTAGAAA
RH49BR167      --> CTCCATCCACTCCACAGGAAGACAAATACGCATGAAGCTCATTGTAGAAA
CT0070892      --> ..................................................

               1451   -   1501
RU06224        --> TTGAAAACTTTCTTTGGATGCACCAAACCAAGACCATGAACAGATAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- TTGAAAACTTTCTTTGGATGCACCAAACCAAGACCATGAACAGATAAGCT
ET0063565      <-- ..................................................
ET0111287      <-- TTGAAAACTTTCTTTGGATGCACCAAACCAAGACCATGAACAGATAAGCT
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> TTGAAAACTTTCTTTGGATGCACCAAACCAAGACCATGAACAGATAAGCT
RH36AJ116      --> TTGAAAACTTTCTTTGGATGCACCAAACCAAGACCATGAACAGATAAGCT
RH49BR167      --> TTGAAAACTTTCTTTGGATGCACCAAACCAAGACCATGAACAGATAAGCT
CT0070892      --> ..................................................

               1501   -   1551
RU06224        --> GTCAAAAACTATGTCAGGTTGGTTT-CCCATCACACCAGGAGATGAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- GTCAAAAACTATGTCAGGTTGGTTT-CCCATCACACCAGGAGATGAGA..
ET0063565      <-- ..................................................
ET0111287      <-- GTCAAAAACTATGTCAGGTTGGTTT-CCCATCACACCAGGAGATGAGACT
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> GTCAAAAACTATGTCAGGTTGGTTT-CCCATCACACCAGGAGATGAGACT
RH36AJ116      --> GTCAAAAACTATGTCAGGTTGGTTT-CCCATCACACCAGGAGATGAGACT
RH49BR167      --> GTCAAAAACTATGTCAGGTTGGTTT-CCCATCACACCAGGAGATGAGACT
CT0070892      --> ............GTCAGGTTGGTTTTCCCATCACACCAGGAGATGAGACT

               1551   -   1601
RU06224        --> GGATATGCCAAAGCAGTGTCATAATGCTCCATGCCAGAAGCAGCTGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- GGATATGCCAAAGCAGTGTCATAATGCTCCATGCCAGAAGCAGCTGGTTT
ET0120698      <-- ..................................................
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> GGATATGCCAAAGCAGTGTCATAATGCACCATGCCAGAAGCAGCTGGTTT
RH36AJ116      --> GGATATGCCAAAGCAGTGTCATAATGCACCATGCCAGAAGCAGCTGGTTT
RH49BR167      --> GGATATGCCAAAGCAGTGTCATAATGCTCCATGCCAGAAGCAGCTGGTTT
CT0070892      --> GGATATGCCAAAGCAGTGTCATAATGCTCCATGCCAGAAGCAGCTGGTTT

               1601   -   1651
RU06224        --> CACTCCACCCCAGTACCCAATTAAGGCATGCCATACGTACACAAACTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- CACTCCACCCCAGTACCCAATTAAGGC.......................
ET0120698      <-- .............TACCCAATTAAGGCATGCCATACGTACACAAACTTCA
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> CACTCCACCCCAGT....................................
RH36AJ116      --> CACTCCACCCCAGT....................................
RH49BR167      --> CACTCCACCCCAGT....................................
CT0070892      --> CACTCCACCCCAGTACCCAATTAAGGCATGCCATACGTACACAAACTTCA

               1651   -   1701
RU06224        --> CATTGTGATGCTGCTTCGCTTCATCAACAACATGTTTCAGGCCTGAGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- CATTGTGATGCTGCTTCGCTTCATCAACAACATGTTTCAGGCCTGAGACT
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> CATTGTGATGCTGCTTCGCTTCATCAACAACATGTTTCAGGCCTGAGACT

               1701   -   1751
RU06224        --> TGCTCACTCTGTCCATTCTTTTGGAATTTTTCATTCTCTTTTATTCCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- TGCTCACTCTGTCCATTCTTTTGGAATTTTTCATTCTCTTTTATTCCTGT
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> TGCTCACTCT........................................

               1751   -   1801
RU06224        --> AAGCCTACTTGCAAACTGTGCTCCTTCTTGTACTGCAACATTAGTATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- AAGCCTACTTGCAAACTGTGCTCCTTCTTGTACTGCAACATTAGTATCCT
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1801   -   1851
RU06224        --> TGGGTTTACTTTTACAAATTTTAGTTTAGACCAAACCAATACAATACTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ..................................................
CT0045364      <-- ..................................................
ET0003362      <-- ..................................................
ET0003970      <-- ..................................................
RH18Q96        <-- ..................................................
CT0054765      <-- ..................................................
ET0003714      <-- ..................................................
CT0074955      <-- ..................................................
CT0073805      <-- ..................................................
CT0124168      <-- ..................................................
ET0092249      <-- ..................................................
CT0109155      <-- ..................................................
ET0045972      <-- ..................................................
CT0107164      <-- ..................................................
RH13K34        <-- ..................................................
RH22V72        <-- ..................................................
RH53BZ91       <-- ..................................................
CT0071796      <-- ..................................................
CT0078018      <-- ..................................................
CT0100300      <-- ..................................................
CT0105678      <-- ..................................................
CT0105749      <-- ..................................................
CT0105966      <-- ..................................................
CT0106030      <-- ..................................................
CT0106521      <-- ..................................................
CT0107035      <-- ..................................................
CT0107589      <-- ..................................................
CT0108003      <-- ..................................................
CT0108011      <-- ..................................................
CT0106638      <-- ..................................................
CT0107858      <-- ..................................................
CT0107822      <-- ..................................................
ET0112564      <-- ..................................................
ET0017050      <-- ..................................................
CT0128950      <-- ..................................................
CT0029734      <-- ..................................................
CT0053162      <-- ..................................................
CT0058554      <-- ..................................................
CT0064858      <-- ..................................................
ET0106794      <-- ..................................................
ET0007831      <-- ..................................................
RH28AD375      <-- ..................................................
RH45BR112      <-- ..................................................
RH45BR115      <-- ..................................................
CT0007434      <-- ..................................................
CT0075069      <-- ..................................................
CT0073215      <-- ..................................................
ET0000736      <-- ..................................................
ET0125833      <-- ..................................................
CT0066798      <-- ..................................................
ET0056333      <-- ..................................................
CT0073442      <-- ..................................................
CT0112471      <-- ..................................................
CT0114527      <-- ..................................................
CT0101877      <-- ..................................................
CT0103934      <-- ..................................................
CT0105155      <-- ..................................................
CT0105615      <-- ..................................................
CT0091478      <-- ..................................................
CT0037322      <-- ..................................................
CT0065424      <-- ..................................................
ET0002710      <-- ..................................................
ET0113485      <-- ..................................................
CT0047950      <-- ..................................................
ET0063565      <-- ..................................................
ET0111287      <-- ..................................................
ET0120698      <-- TGGGTTTACTTTTACAAATTTTAGTTTAGACCAAACCAATACAATACTAA
ET0090623      --> ..................................................
CT0014753      --> ..................................................
CT0100551      --> ..................................................
RH47BP50       --> ..................................................
RH47BP7        --> ..................................................
ET0003604      --> ..................................................
CT0069171      --> ..................................................
RH15L117       --> ..................................................
RH24AB11       --> ..................................................
RH36AJ46       --> ..................................................
RH55CB96       --> ..................................................
CT0018531      --> ..................................................
CT0049958      --> ..................................................
CT0024263      --> ..................................................
CT0066349      --> ..................................................
CT0025273      --> ..................................................
ET0031253      --> ..................................................
ET0122830      --> ..................................................
ET0024995      --> ..................................................
ET0034967      --> ..................................................
ET0045176      --> ..................................................
ET0049860      --> ..................................................
CT0049643      --> ..................................................
CT0088742      --> ..................................................
CT0052526      --> ..................................................
CT0030234      --> ..................................................
CT0055818      --> ..................................................
CT0076977      --> ..................................................
ET0071969      --> ..................................................
ET0130715      --> ..................................................
RH10F73        --> ..................................................
RH12H131       --> ..................................................
ET0023481      --> ..................................................
CT0027383      --> ..................................................
CT0096604      --> ..................................................
CT0051881      --> ..................................................
ET0145964      --> ..................................................
ET0141323      --> ..................................................
ET0141509      --> ..................................................
ET0006596      --> ..................................................
CT0110591      --> ..................................................
CT0114524      --> ..................................................
ET0097162      --> ..................................................
CT0006172      --> ..................................................
CT0042529      --> ..................................................
RH34AJ115      --> ..................................................
RH36AJ116      --> ..................................................
RH49BR167      --> ..................................................
CT0070892      --> ..................................................

               1851   -   1901
RU06224        --> CGAATTAAGAAAATACGAC
                   ~~~~~~~~~~~~~~~~~~~
CT0063614      <-- ...................
CT0045364      <-- ...................
ET0003362      <-- ...................
ET0003970      <-- ...................
RH18Q96        <-- ...................
CT0054765      <-- ...................
ET0003714      <-- ...................
CT0074955      <-- ...................
CT0073805      <-- ...................
CT0124168      <-- ...................
ET0092249      <-- ...................
CT0109155      <-- ...................
ET0045972      <-- ...................
CT0107164      <-- ...................
RH13K34        <-- ...................
RH22V72        <-- ...................
RH53BZ91       <-- ...................
CT0071796      <-- ...................
CT0078018      <-- ...................
CT0100300      <-- ...................
CT0105678      <-- ...................
CT0105749      <-- ...................
CT0105966      <-- ...................
CT0106030      <-- ...................
CT0106521      <-- ...................
CT0107035      <-- ...................
CT0107589      <-- ...................
CT0108003      <-- ...................
CT0108011      <-- ...................
CT0106638      <-- ...................
CT0107858      <-- ...................
CT0107822      <-- ...................
ET0112564      <-- ...................
ET0017050      <-- ...................
CT0128950      <-- ...................
CT0029734      <-- ...................
CT0053162      <-- ...................
CT0058554      <-- ...................
CT0064858      <-- ...................
ET0106794      <-- ...................
ET0007831      <-- ...................
RH28AD375      <-- ...................
RH45BR112      <-- ...................
RH45BR115      <-- ...................
CT0007434      <-- ...................
CT0075069      <-- ...................
CT0073215      <-- ...................
ET0000736      <-- ...................
ET0125833      <-- ...................
CT0066798      <-- ...................
ET0056333      <-- ...................
CT0073442      <-- ...................
CT0112471      <-- ...................
CT0114527      <-- ...................
CT0101877      <-- ...................
CT0103934      <-- ...................
CT0105155      <-- ...................
CT0105615      <-- ...................
CT0091478      <-- ...................
CT0037322      <-- ...................
CT0065424      <-- ...................
ET0002710      <-- ...................
ET0113485      <-- ...................
CT0047950      <-- ...................
ET0063565      <-- ...................
ET0111287      <-- ...................
ET0120698      <-- CGAATTAAGAAAATACGAC
ET0090623      --> ...................
CT0014753      --> ...................
CT0100551      --> ...................
RH47BP50       --> ...................
RH47BP7        --> ...................
ET0003604      --> ...................
CT0069171      --> ...................
RH15L117       --> ...................
RH24AB11       --> ...................
RH36AJ46       --> ...................
RH55CB96       --> ...................
CT0018531      --> ...................
CT0049958      --> ...................
CT0024263      --> ...................
CT0066349      --> ...................
CT0025273      --> ...................
ET0031253      --> ...................
ET0122830      --> ...................
ET0024995      --> ...................
ET0034967      --> ...................
ET0045176      --> ...................
ET0049860      --> ...................
CT0049643      --> ...................
CT0088742      --> ...................
CT0052526      --> ...................
CT0030234      --> ...................
CT0055818      --> ...................
CT0076977      --> ...................
ET0071969      --> ...................
ET0130715      --> ...................
RH10F73        --> ...................
RH12H131       --> ...................
ET0023481      --> ...................
CT0027383      --> ...................
CT0096604      --> ...................
CT0051881      --> ...................
ET0145964      --> ...................
ET0141323      --> ...................
ET0141509      --> ...................
ET0006596      --> ...................
CT0110591      --> ...................
CT0114524      --> ...................
ET0097162      --> ...................
CT0006172      --> ...................
CT0042529      --> ...................
RH34AJ115      --> ...................
RH36AJ116      --> ...................
RH49BR167      --> ...................
CT0070892      --> ...................