Rose Transcriptome Database

               1      -     51
RU06324        --> TTTTGAAAGTAGAAAAATTTTTTTTTAT-AACAACCCC-ATCAAAGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ................tTTTTTTTATTT-AACAACCCC-ATCAAAGTTTG
CT0128074      <-- .................TTTTTTTTTATTAACAACCCC-ATCAAAGTTTG
CT0044305      <-- .......................TTTAT-AACAACCCC-ATCAAAGTTTG
ET0016043      <-- ..............tttttttgaagTAT-AACAACCCC-ATCAAAGTTTG
ET0131501      <-- .......................gtaAT-AACAACCCC-ATCAAAGTTTG
CT0068080      <-- .........................ttT-AACAACCCC-ATCAAAGTTTG
CT0009636      <-- .............................AACAACCCC-ATCAAAGTTTG
CT0056379      <-- .............................AACAACCCC-ATCAAAGTTTG
ET0009855      <-- .............................AACAACCCC-ATCAAAGTTTG
ET0032034      <-- .............................AACAACCCC-ATCAAAGTTTG
ET0037255      <-- .............................AACAACCCC-ATCAAAGTTTG
ET0070340      <-- .............................AACAACCCC-ATCAAAGTTTG
ET0099695      <-- .............................AACAACCCCCATCAAAGTTTG
ET0025333      <-- ...........................aacttAACCCC-ATCAAAGTTTG
ET0064637      <-- ............................aactAACCCC-ATCAAAGTTTG
CT0029650      <-- .................................ACCCC-ATCAAAGTTTG
CT0060374      <-- ............................aataacCCCC-ATCAAAGTTTG
CT0003587      <-- ..........................................tAAGTTGT
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> TTTTGAAAGTAGAAAAAGTCAGAAGTAT-AACAACCCC-ATCAAAGTTTG
ET0089608      --> .................TTTTTTTTTAT-AACAACCCC-ATCAAAGTTTG
CT0083268      --> ......................TTTTTT-AACAACCCC-ATCAAAGTTTG
CT0091490      --> ......................TTTTTT-AACAACCCC-ATCAAAGTTTG
CT0011302      --> ..........................AT-AACAACCC--ATCAAAGTTTG
CT0016066      --> ..........................AT-AACAACCCC-ATCAAAGTTTG
CT0030746      --> ..........................AT-AACAACCCC-ATCAAAGTTTG
CT0037764      --> ..........................AT-AACAACCCC-ATCAAAGTTTG
ET0021188      --> ..........................AT-AACAACCCC-ATCAAAGTTTG
ET0054972      --> ..........................AT-AACAACCCC-ATCAAAGTTTG
CT0031678      --> .............................AACAACCCC-ATCAAAGTTTG
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               51     -    101
RU06324        --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0128074      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0044305      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0016043      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0131501      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0068080      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0009636      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0056379      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0009855      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0032034      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTA..................
ET0037255      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0070340      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0099695      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0025333      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0064637      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0029650      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CA.........
CT0060374      <-- CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0003587      <-- CTTTATTA-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0142983      <-- ...........AAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0005944      <-- .....................AAGCTAAAGTACAATTT-CATGTTTCTTT
ET0031292      <-- ........................................ATGTTTCTTT
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0089608      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0083268      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0091490      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0011302      --> CTTTATATACAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0016066      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0030746      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0037764      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0021188      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
ET0054972      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTTTCATGTTTCTTT
CT0031678      --> CTTTATAT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
CT0007711      --> ......AT-CAAAAACTAGCAAAGCTAAAGTACAATTT-CATGTTTCTTT
RH03B29        --> .................................................T
RH42BI60       --> .................................................T
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               101    -    151
RU06324        --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AGGAAATCCGCAACTAAAA-GTTC
CT0128074      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0044305      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0016043      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0131501      <-- -G-TTTAGAAac......................................
CT0068080      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0009636      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0056379      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0009855      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0032034      <-- ..................................................
ET0037255      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0070340      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTA
ET0099695      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTA
ET0025333      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0064637      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0029650      <-- ..................................................
CT0060374      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0003587      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0142983      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0005944      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0031292      <-- -G-TTTAGAACCAGCAAAGAGGGGG-AGGAAATCCGCAACTAAAA-GTTC
ET0065087      <-- .......tAACCAGCAAAGAGGGGG-AGGAAATCCGCA-CTAAAA-GTTC
RH59CF19       <-- ...........CAGCAAAGAGGGGGGAG-AAATCCGCAACTAAAAAGTTC
RH39BD57       <-- ..............CAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0090775      <-- ................AAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0099441      <-- ...................AGGGGG-AG-AAATCCGCAACTAAAAAGTTC
CT0138619      <-- ...........................G-AAATCCGCAACTAAAA-GTTC
ET0035642      <-- .................................................C
ET0050823      <-- .................................................C
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0089608      --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0083268      --> -G-TTTAGAACAAGCAAAGAGGGG--AG-AAATCCGCAACTAAAA-GTTC
CT0091490      --> -G-TTTAGAACAAGCAAAGAGGGG--AG-AAATCCGCAACTAAAA-GTTC
CT0011302      --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0016066      --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0030746      --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0037764      --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0021188      --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
ET0054972      --> TGTTTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0031678      --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0007711      --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
RH03B29        --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
RH42BI60       --> -G-TTTAGAACCAGCAAAGAGGGGG-AG-AAATCCGCAACTAAAA-GTTC
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               151    -    201
RU06324        --> AACACC-AAAAATA-GACAACCCCGA-GAGAACAACCCCC-A-GAGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0128074      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0044305      <-- A.................................................
ET0016043      <-- AACACC-AAAAATA-GACAACCCC..........................
ET0131501      <-- ..................................................
CT0068080      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0009636      <-- AACACC-AAAAATA-G..................................
CT0056379      <-- AACACC-AAAAATA-GACAACCCCTA-GA.....................
ET0009855      <-- AACACC-AAAAATA-G..................................
ET0032034      <-- ..................................................
ET0037255      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0070340      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0099695      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0025333      <-- AACACC-AAAAATA-G..................................
ET0064637      <-- AACACC-AAAAATA-GACAACCCCTA-GAG....................
CT0029650      <-- ..................................................
CT0060374      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0003587      <-- AACACCCAAAAATA-GACAACCCCctagaga...................
ET0142983      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0005944      <-- AACACC-AAAAtag....................................
ET0031292      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0065087      <-- AACACC-AAAAATAAGACAACCCCTACGAGAACAACCCCC-ACGAGGAGG
RH59CF19       <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
RH39BD57       <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0090775      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0099441      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0138619      <-- AACCCA-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0035642      <-- AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0050823      <-- AACACC-AAAAATA-AGAAACCCCTACGAGAA-AACCCCC-ACGAGGAGG
ET0021587      <-- .....aaaaactaA-GACAACCCCTACGAGAA-AACCCCC-ACGAGGAGG
ET0041201      <-- ...............GACAACCCCTACGAGAACAACCCCC-ACGAGGAGG
ET0019136      <-- ...........................GAGAA-AACCCCA-C-GAGGAGG
ET0053739      <-- ....................cccctacGAGAACAACCCCC-ACGAGGAGG
ET0044226      <-- ..............................AACAACCCCC-A-GAGGAGG
ET0128543      <-- .........................................A-GAGGAGG
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0089608      --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0083268      --> AAAACC-AAAAATA-GACAACCCCGA-GAGATCAACCCCC-A-GAGGAGG
CT0091490      --> AAAACC-AAAAATA-GACAACCCCGA-GAGATCAACCCCC-A-GAGGAGG
CT0011302      --> AACACC-AAAAATA-GACAACCCCta........................
CT0016066      --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0030746      --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0037764      --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0021188      --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
ET0054972      --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCCCA-GAGGAGG
CT0031678      --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0007711      --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
RH03B29        --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
RH42BI60       --> AACACC-AAAAATA-GACAACCCCTA-GAGAACAACCCCC-A-GAGGAGG
CT0013413      --> ......................cctA-GAGAACAACCCCC-A-GAGGAGG
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               201    -    251
RU06324        --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0128074      <-- ACACAAGGATACTCTT..................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0070340      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0099695      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0003587      <-- ..................................................
ET0142983      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAtt........
CT0005944      <-- ..................................................
ET0031292      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0065087      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
RH59CF19       <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
RH39BD57       <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0090775      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0099441      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0138619      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0035642      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0050823      <-- ACACAAGGATACTCTTATTCAGAACCCACGAGACCTAAAAATTAAAAGAA
ET0021587      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAAAGAA
ET0041201      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0019136      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAAAGAA
ET0053739      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0044226      <-- ACACAAGGATACTCTTATTCAGAACCCcagag..................
ET0128543      <-- ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0015335      <-- ..ACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAAAGAA
ET0113599      <-- ..............................AGACCTAAAAATTAAA-G-A
ET0119502      <-- ..............................AGACCTAAAAATTAAA-G-A
ET0124037      <-- .....................................AAAATTAAA-G-A
ET0126783      <-- .....................................AAAATTAAA-G-A
ET0091613      <-- ..........................................TAAA-G-A
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0089608      --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0083268      --> ACACA.............................................
CT0091490      --> ACAC..............................................
CT0011302      --> ..................................................
CT0016066      --> ACACAAGGATACTCT...................................
CT0030746      --> ACACAAGGATACTCT...................................
CT0037764      --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0021188      --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
ET0054972      --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0031678      --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0007711      --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
RH03B29        --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
RH42BI60       --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0013413      --> ACACAAGGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0014739      --> ......GGATACTCTTATTCAGAACCCA-GAGACCTAAAAATTAAA-G-A
CT0054753      --> .....................................AAAATTAAA-G-A
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               251    -    301
RU06324        --> CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTT........
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0070340      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTTTCCATCTTCAGA....
ET0099695      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGA....
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0065087      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
RH59CF19       <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
RH39BD57       <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0090775      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0099441      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
CT0138619      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0035642      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0050823      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0021587      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0041201      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0019136      <-- CTCAACCGAAACAT-GTAAAAA-GCAAAAGCCTT-CCATCTTCAGATCTG
ET0053739      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0044226      <-- ..................................................
ET0128543      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0015335      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0113599      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0119502      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0124037      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0126783      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0091613      <-- CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> CTCAACCGAAACAT-GTAAAAAAGCAAAAGCCTT-CCATCTT........
ET0089608      --> CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0021188      --> CTCAACCGAAACATAGTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0054972      --> CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
CT0031678      --> CTCAACCGAAACAT-GTAAAAAAGCAAA-GCCTT-CCATCTTCAGATCTG
CT0007711      --> CTCAA.............................................
RH03B29        --> CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
RH42BI60       --> CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
CT0013413      --> CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
CT0014739      --> CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGA....
CT0054753      --> CTCAACCGAAACAT-GTAAAAA-GCAAA-GCCTT-CCATCTTCAGATCTG
ET0138597      --> .......................GCAAA-GCCTT-CCATCTTCAGATCTG
CT0026977      --> ....................................CATCTTCAGATCTG
CT0103575      --> .......................................CTTCAGATCTG
ET0028545      --> ..............................................TCTG
ET0018101      --> ...............................................CTG
ET0127707      --> ................................................TG
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               301    -    351
RU06324        --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- AGCTTAAGCCCTGGCGATGTGCA...........................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- A.................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- AGCTTAAGCCCTG.....................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAA...............
ET0065087      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
RH59CF19       <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
RH39BD57       <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0090775      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0099441      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
CT0138619      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0035642      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAA...............
ET0050823      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0021587      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0041201      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAA...............
ET0019136      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0053739      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAA...............
ET0044226      <-- ..................................................
ET0128543      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG......
ET0015335      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0113599      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0119502      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0124037      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0126783      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0091613      <-- AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0076298      <-- .GCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0071033      <-- ..CTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0071801      <-- ..CTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0073594      <-- ..CTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0074888      <-- ..CTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0078012      <-- ..CTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0065484      <-- ...TTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0105783      <-- ...TTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0102398      <-- ....TAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0077058      <-- ......AGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
CT0075837      <-- ...............................TCAATCACACGGG-AACTG
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> AGCTTAAGCCCTGGCGAT................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> AGCTTAAGCCCTGGCGA.................................
ET0021188      --> AGCTTAAGCCCTGGCGA.................................
ET0054972      --> AGCTTAAGCCCTGcgg..................................
CT0031678      --> AGCTTAAGCCCTGGCGA.................................
CT0007711      --> ..................................................
RH03B29        --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
RH42BI60       --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
CT0013413      --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
CT0014739      --> ..................................................
CT0054753      --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0138597      --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGGGAACTG
CT0026977      --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
CT0103575      --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0028545      --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0018101      --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0127707      --> AGCTTAAGCCCTGGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
ET0059535      --> ............GGCGATGTGCACAATCAAGTCAATCACACGGG-AACTG
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               351    -    401
RU06324        --> TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTG..............
RH59CF19       <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
RH39BD57       <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0090775      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAG........
ET0099441      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAG........
CT0138619      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0035642      <-- ..................................................
ET0050823      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0021587      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0041201      <-- ..................................................
ET0019136      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0113599      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0119502      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0124037      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0126783      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0091613      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0076298      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0071033      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0071801      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0073594      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0074888      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0078012      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0065484      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0105783      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0102398      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0077058      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
CT0075837      <-- TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0136632      <-- ..........................................taGTTGTT
CT0015356      <-- ................................................TT
CT0076633      <-- ................................................TT
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> TAACCCCACTCGTTGTCgt...............................
RH42BI60       --> TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
CT0013413      --> TA................................................
CT0014739      --> ..................................................
CT0054753      --> TAACCCCACTCATTGTCATACCATGAA-CAAGCTTGACAAAGTTGTTGTT
ET0138597      --> TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
CT0026977      --> TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
CT0103575      --> TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0028545      --> TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0018101      --> TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0127707      --> TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
ET0059535      --> TAACCCCACTCATTGTCATACCATGAAACAAGCTTGACAAAGTTGTTGTT
CT0084934      --> ...........tgatgccaaggctggaattgcaTTGACAAAGTTGTTGTT
CT0000563      --> ..........................................TTGTTGTT
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               401    -    451
RU06324        --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
RH39BD57       <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0035642      <-- ..................................................
ET0050823      <-- CAATGCA...........................................
ET0021587      <-- CAATGCA...........................................
ET0041201      <-- ..................................................
ET0019136      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA....................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- CAATatctg.........................................
ET0113599      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0119502      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0124037      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0126783      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0091613      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTG...........
ET0076298      <-- CAATGCAATTCCAGCCTTGGTCAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0071033      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0071801      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0073594      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0074888      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0078012      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0065484      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0105783      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0102398      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0077058      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0075837      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0136632      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0015356      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0076633      <-- CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0066708      <-- .....................CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> CAATGCAATTCCAG....................................
ET0138597      --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0026977      --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0103575      --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0028545      --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0018101      --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0127707      --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
ET0059535      --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0084934      --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0000563      --> CAATGCAATTCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0090215      --> .........TCCAGCCTTGG-CAT-C-AAAAGATGCTTGACCTGTTGTCA
CT0095437      --> .........TCCAGCCTTGG-CAT-C-AAAAGATGCTTGACCTGTTGTCA
CT0096173      --> .........TCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0096260      --> .........TCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0096561      --> .........TCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0097932      --> .........TCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0098058      --> .........TCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0098191      --> .........TCCAGCCTTGG-CAT-C-AAA-GATGCTTGACCTGTTGTCA
CT0097278      --> .....tttcctagtCCTTGG-CATTCAAAA-GATGCTTGACCTGTTGTCA
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               451    -    501
RU06324        --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
RH39BD57       <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- CCAAT.............................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- CCAATGAAGTCGGTTGAC................................
ET0119502      <-- CCAATGAAGTCGGTTGAC................................
ET0124037      <-- CCAATGAAGTCGGTTGAC................................
ET0126783      <-- CCAATGAAGTCGGTTGAC................................
ET0091613      <-- ..................................................
ET0076298      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCG-TGTAACCCAAGATGCC
ET0071033      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0071801      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0073594      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0074888      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0078012      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0065484      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0105783      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0102398      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0077058      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0075837      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0136632      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0015356      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0076633      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0066708      <-- CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0115598      <-- ........................TCCTCATCGGTGTAACCCAAGATGCC
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0026977      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0103575      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0028545      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0018101      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
ET0127707      --> CCAATGAAGT........................................
ET0059535      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0084934      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0000563      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0090215      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0095437      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0096173      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0096260      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0096561      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0097932      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0098058      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0098191      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0097278      --> CCAATGAAGTCGGTTGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0036874      --> ..............TGACACAACATCCTCATCGGTGTAACCCAAGATGCC
CT0074238      --> .................................GTGTAACCCAAGATGCC
CT0076555      --> .................................GTGTAACCCAAGATGCC
CT0076785      --> .................................GTGTAACCCAAGATGCC
ET0087386      --> .................................GTGTAACCCAAGATGCC
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               501    -    551
RU06324        --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
RH39BD57       <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- CTTCAACTTT--CCCTCAGTA-CTCC-TTCCTTGA-TAGCAG-CC.....
ET0071033      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CC.....
ET0071801      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CC.....
ET0073594      <-- CTTCAACTTT--CCCTCAG-AACTCC-Taccttagaataagacaagacc.
ET0074888      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CC.....
ET0078012      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CC.....
ET0065484      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CC.....
ET0105783      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CC.....
ET0102398      <-- CTTCAACTTT--CCCTCAG-A-CTCCCT-CCTTGA-TAGCAG-CC.....
ET0077058      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CC.....
CT0075837      <-- CTTCAACTTT........................................
ET0136632      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0015356      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0076633      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
ET0066708      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0115598      <-- CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
ET0067580      <-- ...........................................CCTTGAT
ET0019626      <-- ..............................................gtAT
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> CTTCt.............................................
CT0026977      --> CTTCAACTTT--CCCT..................................
CT0103575      --> CTTCAACTTT--CCCTCAG-A-CTCC-T......................
ET0028545      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TA............
ET0018101      --> CTTCAA............................................
ET0127707      --> ..................................................
ET0059535      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG........
CT0084934      --> CTTCAACTTT--CCCTCAG-A-CTCC-T......................
CT0000563      --> CTTCAACTTccttcct..................................
CT0090215      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0095437      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0096173      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0096260      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0096561      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0097932      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0098058      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0098191      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0097278      --> CTTCAACTTTTCCCCTCAG-AACTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0036874      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0074238      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0076555      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0076785      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
ET0087386      --> CTTCAACTTT--CCCTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0119761      --> ...............TCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
ET0004224      --> ...............TCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
ET0010571      --> ...............TCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
ET0054909      --> ..............tTCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
ET0116028      --> ...............TCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
ET0119017      --> ...............TCAG-A-CTCC-T-CCTTGA-TAGCAG-CCTTGAT
CT0075265      --> ........................CC-T-CCTTGAGTAGCAGACCTTGAT
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               551    -    601
RU06324        --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
RH39BD57       <-- CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0015356      <-- CTGGTCATAGGTTGCTG.................................
CT0076633      <-- CTGGTCATAGGTTGCTG.................................
ET0066708      <-- CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0115598      <-- CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0067580      <-- CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0019626      <-- CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0110992      <-- .TGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0015828      <-- .................tCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0000845      <-- ................................CAGTGAGGTCAACAACT-
CT0009425      <-- ....................................GAGGTCAACAACT-
CT0022562      <-- ....................................GAGGTCAACAACT-
CT0060972      <-- ....................................GAGGTCAACAACT-
CT0072704      <-- ....................................GAGGTCAACAACT-
ET0028494      <-- .....................................AGGTCAACAACT-
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0095437      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0096173      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACTA
CT0096260      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0096561      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0097932      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0098058      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0098191      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0097278      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0036874      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0074238      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0076555      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0076785      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0087386      --> ..................................................
CT0119761      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0004224      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0010571      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0054909      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0116028      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
ET0119017      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0075265      --> CTGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0010323      --> .TGGTCATAGGTTGCTGCCTTCTCAAGTCTGACAGTGAGGTCAACAACT-
CT0080469      --> ....................................GAGGTCAACAACT-
CT0117513      --> ....................................GAGGTCAACAACT-
ET0019222      --> ....................................GAGGTCAACAACT-
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               601    -    651
RU06324        --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
RH39BD57       <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- GAAACATCAACAGTtgggttactacggtaaggtcctatttccggtt....
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- GAAACATCAACAGTGGGGT-ACACGGAAGGCCATTCCGGTCAACTTG...
CT0115598      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0067580      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0019626      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0110992      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0015828      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0000845      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0009425      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0022562      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0060972      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0072704      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0028494      <-- GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0018862      <-- .........ACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0038605      <-- .........ACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0006037      <-- ......................ACGGAAGGCCATTCCGGTCAACTTGCCA
ET0083912      <-- ..............................CCATTCCGGTCAACTTGCCA
ET0139326      <-- ..................................TCCGGTCAACTTGCCA
CT0040963      <-- ..............................................tCCA
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> GAAACATCAACAGTGGG-T...............................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCC.
CT0095437      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCC.
CT0096173      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAAC......
CT0096260      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0096561      --> GAAACATCAACAGTGGG-T-ACACGGAAG-CCATTCCGGTCAACTTGCCA
CT0097932      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0098058      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0098191      --> GAAACATCAACAGTGG--T-ACACGGAAG-CCATTCCGGTCAACTTGCCA
CT0097278      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGC..
CT0036874      --> GAAACAT...........................................
CT0074238      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0076555      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0076785      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0087386      --> ..................................................
CT0119761      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0004224      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0010571      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0054909      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0116028      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0119017      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0075265      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0010323      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0080469      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
CT0117513      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0019222      --> GAAACATCAACAGTGGG-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0130727      --> ........ctagtTGGG-TTACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0068510      --> ................G-T-ACACGGAAGGCCATTCCGGTCAACTTGCCA
ET0146686      --> .....................CACGGAAGGCCATTCCGGTCAACTTGCCA
CT0062411      --> .................................................A
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               651    -    701
RU06324        --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
RH39BD57       <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0067580      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0019626      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0110992      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0015828      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0000845      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0009425      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0022562      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0060972      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0072704      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0028494      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0018862      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0038605      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0006037      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0083912      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0139326      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0040963      <-- TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0030494      <-- ..............................CTTGGCAGCTCCAGTGCTGC
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> TTGA..............................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0076555      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0076785      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0087386      --> ..................................................
CT0119761      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0004224      --> TTGAGAGCAGG.......................................
ET0010571      --> TTGAGAGCAGG.......................................
ET0054909      --> TTGAGAGCAGG.......................................
ET0116028      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0119017      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0075265      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0010323      --> TTGAGAGCAGGCAGAA..................................
CT0080469      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0117513      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0019222      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0130727      --> TTGAGAGCAGGCAGAACCTTTTCAGACAGCCTTGGCAGCTCCAGTGCTGC
ET0068510      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
ET0146686      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0062411      --> TTGAGAGCAGGCAGAACCTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0018422      --> .................CTTT-CCGACAGCCTTGGCAGCTCCAGTGCTGC
CT0073544      --> .............................CCTTGGCAGCTCCAGTGCTGC
CT0023117      --> .................................GGCAGCTCCAGTGCTGC
CT0101522      --> .........................................CAGTGCTGC
CT0069096      --> ...............................agactccgagtggctagGC
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               701    -    751
RU06324        --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
RH39BD57       <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- TGGGAATGATG.......................................
ET0067580      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0019626      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0110992      <-- TGGGAATGATG.......................................
ET0015828      <-- TGGGAATG..........................................
ET0000845      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC...........
CT0009425      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCCCAGTCCTTGG.
CT0022562      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGG.
CT0060972      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGG.
CT0072704      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGG.
ET0028494      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0018862      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0038605      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0006037      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0083912      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0139326      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0040963      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0030494      <-- TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0102378      <-- ...........................................CCTTGGC
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> TGGGAATGATGT......................................
CT0076555      --> TGGGAATGATGTgaa...................................
CT0076785      --> TGGGAATGATGT......................................
ET0087386      --> ..................................................
CT0119761      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGT.......
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGT.......
ET0119017      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGT.......
CT0075265      --> TGGGAATGATGTTGAATGAGG.............................
CT0010323      --> ..................................................
CT0080469      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0117513      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0019222      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0130727      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0068510      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0146686      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0062411      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0018422      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0073544      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0023117      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0101522      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0069096      --> TGGGAATGATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
ET0022665      --> ........ATGTTGAATGAGGCAGCACGTCCACCTCTCC-AGTCCTTGGC
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               751    -    801
RU06324        --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
RH39BD57       <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- TGATGGTCCATC......................................
ET0019626      <-- TGATGGTCCATCAACAGTCTTC-T..........................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0018862      <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGT.
CT0038605      <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGT.
CT0006037      <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0083912      <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCAac...
ET0139326      <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0040963      <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0030494      <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0102378      <-- TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0136662      <-- ...................................ATGGAGTGCACGGTA
ET0011016      <-- ...........................................CACGGTA
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> TGATGGTCCATCAACAGTCTTC-TG.........................
CT0117513      --> TGATGGTCCATCAA....................................
ET0019222      --> TGATGGTCCATCAACAGTCTTCGTGGGTG-CAGTGAg.............
ET0130727      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0068510      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0146686      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0062411      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0018422      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0073544      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0023117      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0101522      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0069096      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0022665      --> TGATGGTCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
CT0109270      --> ......TCCATCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0058198      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0061399      --> .........tTCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0062260      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0065669      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0066498      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0068572      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0087508      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0088833      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0089424      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0089555      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0094170      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0095092      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0098287      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0098343      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0098532      --> ..........TCAACAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0094030      --> .......tacaaacaAGTCTTC-TGGGTGGCAGTGATGGAGTGCACGGTA
ET0128751      --> .....................................GGAGTGCACGGTA
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               801    -    851
RU06324        --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
RH39BD57       <-- GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- GTCATAA-GACCCTCA..................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGAT...........
ET0083912      <-- ..................................................
ET0139326      <-- GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAAC........
CT0040963      <-- GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
CT0030494      <-- GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0102378      <-- GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0136662      <-- GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0011016      <-- GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCAT...............
ET0068510      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAA.........
ET0146686      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
CT0062411      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
CT0018422      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCAT...............
CT0073544      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
CT0023117      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
CT0101522      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
CT0069096      --> GTCATAACGACCCTCAA.................................
ET0022665      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
CT0109270      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0058198      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0061399      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0062260      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0065669      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0066498      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0068572      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0087508      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0088833      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0089424      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0089555      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0094170      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0095092      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0098287      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0098343      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0098532      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0094030      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0128751      --> GTCATAA-GACCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0022822      --> ..........CCCTCAACAATTCCAAACCTGTCATTGATAACCTTGGCAA
ET0040592      --> ..........gtaacggtatgtctAAACCTGTCATTGATAACCTTGGCAA
CT0135432      --> ..................................TTGATAACCTTGGCAA
ET0121305      --> .......................................ccCCTTGCCAA
CT0021267      --> ............................................TGGCAA
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               851    -    901
RU06324        --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
RH39BD57       <-- GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- GGGGAGCAA-GACAGTTGGTAGT...........................
CT0030494      <-- GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCA.................
ET0102378      <-- GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0136662      <-- GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0011016      <-- GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
CT0029943      <-- ........A-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0083602      <-- ...........ACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
CT0062411      --> GGGGAGCAA-GACA....................................
CT0018422      --> ..................................................
CT0073544      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACA-TGGCAAG
CT0023117      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
CT0101522      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAAT......
CT0069096      --> ..................................................
ET0022665      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
CT0109270      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0058198      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0061399      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0062260      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0065669      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0066498      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0068572      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0087508      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0088833      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0089424      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0089555      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0094170      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0095092      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0098287      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0098343      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0098532      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0094030      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0128751      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0022822      --> GGGGAGCAA.........................................
ET0040592      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
CT0135432      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
ET0121305      --> GGTTATCAACGACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
CT0021267      --> GGGGAGCAA-GACAGTTGGTAGTGCAGCTAGCATTGGAAACAATGGCAAG
CT0113225      --> .......................GCAGCTAGCATTGGAAACAATGGCAAG
CT0054610      --> ...................................GGAAACAATGGCAAG
CT0076849      --> ...................................GGAAACAATGGCAAG
CT0133077      --> ..............................................CAAG
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               901    -    951
RU06324        --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................  Control
CT0128074      <-- ..................................................  Control
CT0044305      <-- ..................................................  Control
ET0016043      <-- ..................................................  Ethylene
ET0131501      <-- ..................................................  Ethylene
CT0068080      <-- ..................................................  Control
CT0009636      <-- ..................................................  Control
CT0056379      <-- ..................................................  Control
ET0009855      <-- ..................................................  Ethylene
ET0032034      <-- ..................................................  Ethylene
ET0037255      <-- ..................................................  Ethylene
ET0070340      <-- ..................................................  Ethylene
ET0099695      <-- ..................................................  Ethylene
ET0025333      <-- ..................................................  Ethylene
ET0064637      <-- ..................................................  Ethylene
CT0029650      <-- ..................................................  Control
CT0060374      <-- ..................................................  Control
CT0003587      <-- ..................................................  Control
ET0142983      <-- ..................................................  Ethylene
CT0005944      <-- ..................................................  Control
ET0031292      <-- ..................................................  Ethylene
ET0065087      <-- ..................................................  Ethylene
RH59CF19       <-- GTTGGACTTGTATTCATGCTCATCGACTCCCACAACAAACATGGG.....  WaterDS
RH39BD57       <-- GTTGGACTTGTATTCATGCTCATCGACTCCCACAACAAACATGGG.....  WaterDS
ET0090775      <-- ..................................................  Ethylene
ET0099441      <-- ..................................................  Ethylene
CT0138619      <-- ..................................................  Control
ET0035642      <-- ..................................................  Ethylene
ET0050823      <-- ..................................................  Ethylene
ET0021587      <-- ..................................................  Ethylene
ET0041201      <-- ..................................................  Ethylene
ET0019136      <-- ..................................................  Ethylene
ET0053739      <-- ..................................................  Ethylene
ET0044226      <-- ..................................................  Ethylene
ET0128543      <-- ..................................................  Ethylene
ET0015335      <-- ..................................................  Ethylene
ET0113599      <-- ..................................................  Ethylene
ET0119502      <-- ..................................................  Ethylene
ET0124037      <-- ..................................................  Ethylene
ET0126783      <-- ..................................................  Ethylene
ET0091613      <-- ..................................................  Ethylene
ET0076298      <-- ..................................................  Ethylene
ET0071033      <-- ..................................................  Ethylene
ET0071801      <-- ..................................................  Ethylene
ET0073594      <-- ..................................................  Ethylene
ET0074888      <-- ..................................................  Ethylene
ET0078012      <-- ..................................................  Ethylene
ET0065484      <-- ..................................................  Ethylene
ET0105783      <-- ..................................................  Ethylene
ET0102398      <-- ..................................................  Ethylene
ET0077058      <-- ..................................................  Ethylene
CT0075837      <-- ..................................................  Control
ET0136632      <-- ..................................................  Ethylene
CT0015356      <-- ..................................................  Control
CT0076633      <-- ..................................................  Control
ET0066708      <-- ..................................................  Ethylene
CT0115598      <-- ..................................................  Control
ET0067580      <-- ..................................................  Ethylene
ET0019626      <-- ..................................................  Ethylene
ET0110992      <-- ..................................................  Ethylene
ET0015828      <-- ..................................................  Ethylene
ET0000845      <-- ..................................................  Ethylene
CT0009425      <-- ..................................................  Control
CT0022562      <-- ..................................................  Control
CT0060972      <-- ..................................................  Control
CT0072704      <-- ..................................................  Control
ET0028494      <-- ..................................................  Ethylene
CT0018862      <-- ..................................................  Control
CT0038605      <-- ..................................................  Control
CT0006037      <-- ..................................................  Control
ET0083912      <-- ..................................................  Ethylene
ET0139326      <-- ..................................................  Ethylene
CT0040963      <-- ..................................................  Control
CT0030494      <-- ..................................................  Control
ET0102378      <-- GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0136662      <-- GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0011016      <-- GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
CT0029943      <-- GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Control
ET0083602      <-- GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0124291      <-- ..................................................  Ethylene
CT0098065      <-- ..................................................  Control
CT0096684      <-- ..................................................  Control
CT0072135      <-- ..................................................  Control
ET0041178      <-- ..................................................  Ethylene
ET0091439      <-- ..................................................  Ethylene
ET0101349      <-- ..................................................  Ethylene
ET0109807      <-- ..................................................  Ethylene
ET0101420      <-- ..................................................  Ethylene
ET0102966      <-- ..................................................  Ethylene
CT0099912      <-- ..................................................  Control
CT0068575      <-- ..................................................  Control
CT0111752      <-- ..................................................  Control
ET0049118      <-- ..................................................  Ethylene
ET0129963      <-- ..................................................  Ethylene
ET0054067      <-- ..................................................  Ethylene
CT0081087      <-- ..................................................  Control
ET0088326      --> ..................................................  Ethylene
ET0089608      --> ..................................................  Ethylene
CT0083268      --> ..................................................  Control
CT0091490      --> ..................................................  Control
CT0011302      --> ..................................................  Control
CT0016066      --> ..................................................  Control
CT0030746      --> ..................................................  Control
CT0037764      --> ..................................................  Control
ET0021188      --> ..................................................  Ethylene
ET0054972      --> ..................................................  Ethylene
CT0031678      --> ..................................................  Control
CT0007711      --> ..................................................  Control
RH03B29        --> ..................................................  WaterDS
RH42BI60       --> ..................................................  WaterDS
CT0013413      --> ..................................................  Control
CT0014739      --> ..................................................  Control
CT0054753      --> ..................................................  Control
ET0138597      --> ..................................................  Ethylene
CT0026977      --> ..................................................  Control
CT0103575      --> ..................................................  Control
ET0028545      --> ..................................................  Ethylene
ET0018101      --> ..................................................  Ethylene
ET0127707      --> ..................................................  Ethylene
ET0059535      --> ..................................................  Ethylene
CT0084934      --> ..................................................  Control
CT0000563      --> ..................................................  Control
CT0090215      --> ..................................................  Control
CT0095437      --> ..................................................  Control
CT0096173      --> ..................................................  Control
CT0096260      --> ..................................................  Control
CT0096561      --> ..................................................  Control
CT0097932      --> ..................................................  Control
CT0098058      --> ..................................................  Control
CT0098191      --> ..................................................  Control
CT0097278      --> ..................................................  Control
CT0036874      --> ..................................................  Control
CT0074238      --> ..................................................  Control
CT0076555      --> ..................................................  Control
CT0076785      --> ..................................................  Control
ET0087386      --> ..................................................  Ethylene
CT0119761      --> ..................................................  Control
ET0004224      --> ..................................................  Ethylene
ET0010571      --> ..................................................  Ethylene
ET0054909      --> ..................................................  Ethylene
ET0116028      --> ..................................................  Ethylene
ET0119017      --> ..................................................  Ethylene
CT0075265      --> ..................................................  Control
CT0010323      --> ..................................................  Control
CT0080469      --> ..................................................  Control
CT0117513      --> ..................................................  Control
ET0019222      --> ..................................................  Ethylene
ET0130727      --> ..................................................  Ethylene
ET0068510      --> ..................................................  Ethylene
ET0146686      --> GTTGGACTTGTATTC...................................  Ethylene
CT0062411      --> ..................................................  Control
CT0018422      --> ..................................................  Control
CT0073544      --> GTTGGta...........................................  Control
CT0023117      --> GTTGGAC...........................................  Control
CT0101522      --> ..................................................  Control
CT0069096      --> ..................................................  Control
ET0022665      --> GTTGGACTTGTATTCATGCTCATTGAC.......................  Ethylene
CT0109270      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Control
ET0058198      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0061399      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0062260      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0065669      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0066498      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0068572      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0087508      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0088833      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0089424      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0089555      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0094170      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0095092      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0098287      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0098343      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0098532      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0094030      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
ET0128751      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAA............  Ethylene
ET0022822      --> ..................................................  Ethylene
ET0040592      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
CT0135432      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Control
ET0121305      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Ethylene
CT0021267      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Control
CT0113225      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Control
CT0054610      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Control
CT0076849      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Control
CT0133077      --> GTTGGACTTGTATTCATGCTCATTGACTCCCACAACAAACATGGGGGCAT  Control
CT0113065      --> .....................ATTGACTCCCACAACAAACATGGGGGCAT  Control
CT0027963      --> ...............................ACAACAAACATGGGGGCAT  Control
CT0110565      --> ................................CAACAAACATGGGGGCAT  Control
ET0047551      --> ................................aacaAAACATGGGGGCAT  Ethylene
ET0087976      --> ................attagaactcccaacaaacaAAACATGGGGGCAT  Ethylene
CT0061128      --> ......................................ACATGGGGGCAT  Control
CT0062234      --> ..................................................  Control
CT0057224      --> ..................................................  Control
ET0034606      --> ..................................................  Ethylene
CT0071729      --> ..................................................  Control
CT0075141      --> ..................................................  Control
CT0029770      --> ..................................................  Control
ET0005385      --> ..................................................  Ethylene
CT0028501      --> ..................................................  Control
CT0036744      --> ..................................................  Control
CT0090203      --> ..................................................  Control
ET0059924      --> ..................................................  Ethylene
ET0024349      --> ..................................................  Ethylene
CT0021205      --> ..................................................  Control

               951    -   1001
RU06324        --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- CCTTACTTGGGGCAGAGATGACAACCTTCTT...................
ET0136662      <-- CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
ET0011016      <-- CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0029943      <-- CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
ET0083602      <-- CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTT.......
ET0058198      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0061399      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0062260      --> CCTTACTTGGGG......................................
ET0065669      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0066498      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0068572      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0087508      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0088833      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0089424      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0089555      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0094170      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0095092      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0098287      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0098343      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0098532      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0094030      --> CCTTACTTGGGGCAGAGATGACAACCTT......................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0135432      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
ET0121305      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0021267      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0113225      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0054610      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0076849      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0133077      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0113065      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0027963      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0110565      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
ET0047551      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
ET0087976      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAAGTGA
CT0061128      --> CCTTACTTGGGGCAGAGATGACAACCTTCTTGGCACCACCCTTCAA....
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               1001   -   1051
RU06324        --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- GCGGCGGCTTTGTCCTTGTCAGTG..........................
ET0011016      <-- GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAG................
CT0029943      <-- GCGGC.............................................
ET0083602      <-- GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0135432      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
ET0121305      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0021267      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0113225      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0054610      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0076849      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0133077      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0113065      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0027963      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0110565      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
ET0047551      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
ET0087976      --> GCGGCGGCTTTGTCCTTGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0061128      --> ..................................................
CT0062234      --> ................TGTCAGTGAACACTCCAGTAGACTCCACAACAAT
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               1051   -   1101
RU06324        --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
ET0124291      <-- ............................CTCCTCTGGGTTTCTGAGCCCG
CT0098065      <-- ....................................GGTTTCTGAGCCCG
CT0096684      <-- .......................................TTCTGAGCCCG
CT0072135      <-- ..................................................
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
ET0121305      --> ATCGGCG-CCAACCGAACCCCATGGGATCT....................
CT0021267      --> AT................................................
CT0113225      --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
CT0054610      --> ATCGGCGACCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
CT0076849      --> ATCGGCGACCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
CT0133077      --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
CT0113065      --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
CT0027963      --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAG....
CT0110565      --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
ET0047551      --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
ET0087976      --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
CT0061128      --> ..................................................
CT0062234      --> ATCGGCG-CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
CT0057224      --> ........CCAACCGAACCCCATGGGATCTCCTCTGGGTTTCTGAGCCCG
ET0034606      --> ...................CCATGGGATCTCCTCTGGGTTTCTGAGCCCG
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               1101   -   1151
RU06324        --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- A.................................................
ET0124291      <-- AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
CT0098065      <-- AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
CT0096684      <-- AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGGGTCTTCTCATCCTTA
CT0072135      <-- .......................................TCTCATCCTTA
ET0041178      <-- ..................................................
ET0091439      <-- ..................................................
ET0101349      <-- ..................................................
ET0109807      <-- ..................................................
ET0101420      <-- ..................................................
ET0102966      <-- ..................................................
CT0099912      <-- ..................................................
CT0068575      <-- ..................................................
CT0111752      <-- ..................................................
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCC...
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> AAGACGGCAACTGG....................................
CT0054610      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-T.............
CT0076849      --> AAGACGGCAACTGGCTTC-CACCGA.........................
CT0133077      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
CT0113065      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
CT0027963      --> ..................................................
CT0110565      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
ET0047551      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
ET0087976      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
CT0061128      --> ..................................................
CT0062234      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
CT0057224      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
ET0034606      --> AAGACGGCAACTGGCTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
CT0071729      --> ..............CTTCTCACCGAAG-AGGAGGG-TCTTCTCATCCTTA
CT0075141      --> .................CTCACCGAAGGAGGAGGG-TCTTCTCATCCTTA
CT0029770      --> ..................................................
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               1151   -   1201
RU06324        --> ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0098065      <-- ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0096684      <-- ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0072135      <-- ACCTTTGAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
ET0041178      <-- .............TGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
ET0091439      <-- .............TGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
ET0101349      <-- .............TGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
ET0109807      <-- .............TGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
ET0101420      <-- ...............GTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
ET0102966      <-- ................TGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0099912      <-- ..................CTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0068575      <-- ........................TGCTCCGTGGACGGTGTCATACTTAA
CT0111752      <-- .........................................CATACTTAA
ET0049118      <-- ..................................................
ET0129963      <-- ..................................................
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0113065      --> ACCTT-GAGCTCATGGTGCTT.............................
CT0027963      --> ..................................................
CT0110565      --> ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTG.................
ET0047551      --> ACCTT-GAGCTCATGGTGCTTCCATGCTCgtg..................
ET0087976      --> ACCAT-GA..........................................
CT0061128      --> ..................................................
CT0062234      --> ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0057224      --> ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
ET0034606      --> ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0071729      --> ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0075141      --> ACCTT-GAGCTCATGGTGCTTCCATGCTCCGTGGACGGTGTCATACTTAA
CT0029770      --> ...................................CGGTGTCATACTTAA
ET0005385      --> ..................................................
CT0028501      --> ..................................................
CT0036744      --> ..................................................
CT0090203      --> ..................................................
ET0059924      --> ..................................................
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               1201   -   1251
RU06324        --> A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0098065      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0096684      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0072135      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0041178      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0091439      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0101349      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0109807      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0101420      <-- A-CAATGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0102966      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0099912      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0068575      <-- AACA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0111752      <-- A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0049118      <-- .............ATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0129963      <-- ..............................GAATGGATCGTTAACAGCGA
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> A-CA-TGTAGGTCA....................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0057224      --> A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0034606      --> A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0071729      --> A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0075141      --> A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
CT0029770      --> A-CA-TGTAGGTCATGTAGTCGGTGGTGATGAATGGATCGTTAACAGCGA
ET0005385      --> ...........................GATGAATGGATCGTTAACAGCGA
CT0028501      --> .............................TGAATGGATCGTTAACAGCGA
CT0036744      --> .............................TGAATGGATCGTTAACAGCGA
CT0090203      --> ............................................CAGCGA
ET0059924      --> ..............................................GCGA
ET0024349      --> ..................................................
CT0021205      --> ..................................................

               1251   -   1301
RU06324        --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0098065      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0096684      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0072135      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAAACGTCC
ET0041178      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0091439      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0101349      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0109807      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0101420      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0102966      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0099912      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0068575      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0111752      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0049118      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0129963      <-- CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0054067      <-- ..................................................
CT0081087      <-- ..................................................
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> CGAGCTCAA.........................................
CT0057224      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0034606      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0071729      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0075141      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0029770      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0005385      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0028501      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0036744      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0090203      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0059924      --> CGAGCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
ET0024349      --> ...GCTCAACATCGTCCCTCTGTAGGGCGACCCTAGCAACTAAA-CGTCC
CT0021205      --> .....atcggacgtttagttgcTAGGGCGACCCTAGCAACTAAA-CGTCC

               1301   -   1351
RU06324        --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTG...................
CT0098065      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGG............
CT0096684      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGG............
CT0072135      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0041178      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0091439      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0101349      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0109807      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0101420      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0102966      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0099912      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0068575      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0111752      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0049118      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0129963      <-- GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0054067      <-- .....TTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0081087      <-- ..............................................ATTG
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> GATTCTTCCGAATCCG..................................
ET0034606      --> GATTCT-CCGAATCCGTTGA..............................
CT0071729      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0075141      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0029770      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGAct................
ET0005385      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0028501      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0036744      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0090203      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0059924      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
ET0024349      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG
CT0021205      --> GATTCTTCCGAATCCGTTGATTCCGATCTTGATCTTGGCCATGGTGATTG

               1351   -   1401
RU06324        --> ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ATTTGGAGAGAGT.....................................
ET0041178      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0091439      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0101349      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0109807      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0101420      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTTTGATTTTATTTT-
ET0102966      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTTTGATTT-ATTTT-
CT0099912      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
CT0068575      <-- ATTTGGAGAGAGT.....................................
CT0111752      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0049118      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0129963      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0054067      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTTTGATTT-ATTTTT
CT0081087      <-- ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ATTTGGAGAG........................................
CT0075141      --> ATTTGGAGAGA.......................................
CT0029770      --> ..................................................
ET0005385      --> ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTTTATTTT-
CT0028501      --> ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
CT0036744      --> ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
CT0090203      --> ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0059924      --> ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
ET0024349      --> ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-
CT0021205      --> ATTTGGAGAGAGTAGAGAATAGAGAGTTTAGGTTTTT-GATTT-ATTTT-

               1401   -   1451
RU06324        --> GATTTTGAGGAAGAAGATGAGGGTTTTGGATTGCTTGTTTCTCAATTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..................................................
CT0128074      <-- ..................................................
CT0044305      <-- ..................................................
ET0016043      <-- ..................................................
ET0131501      <-- ..................................................
CT0068080      <-- ..................................................
CT0009636      <-- ..................................................
CT0056379      <-- ..................................................
ET0009855      <-- ..................................................
ET0032034      <-- ..................................................
ET0037255      <-- ..................................................
ET0070340      <-- ..................................................
ET0099695      <-- ..................................................
ET0025333      <-- ..................................................
ET0064637      <-- ..................................................
CT0029650      <-- ..................................................
CT0060374      <-- ..................................................
CT0003587      <-- ..................................................
ET0142983      <-- ..................................................
CT0005944      <-- ..................................................
ET0031292      <-- ..................................................
ET0065087      <-- ..................................................
RH59CF19       <-- ..................................................
RH39BD57       <-- ..................................................
ET0090775      <-- ..................................................
ET0099441      <-- ..................................................
CT0138619      <-- ..................................................
ET0035642      <-- ..................................................
ET0050823      <-- ..................................................
ET0021587      <-- ..................................................
ET0041201      <-- ..................................................
ET0019136      <-- ..................................................
ET0053739      <-- ..................................................
ET0044226      <-- ..................................................
ET0128543      <-- ..................................................
ET0015335      <-- ..................................................
ET0113599      <-- ..................................................
ET0119502      <-- ..................................................
ET0124037      <-- ..................................................
ET0126783      <-- ..................................................
ET0091613      <-- ..................................................
ET0076298      <-- ..................................................
ET0071033      <-- ..................................................
ET0071801      <-- ..................................................
ET0073594      <-- ..................................................
ET0074888      <-- ..................................................
ET0078012      <-- ..................................................
ET0065484      <-- ..................................................
ET0105783      <-- ..................................................
ET0102398      <-- ..................................................
ET0077058      <-- ..................................................
CT0075837      <-- ..................................................
ET0136632      <-- ..................................................
CT0015356      <-- ..................................................
CT0076633      <-- ..................................................
ET0066708      <-- ..................................................
CT0115598      <-- ..................................................
ET0067580      <-- ..................................................
ET0019626      <-- ..................................................
ET0110992      <-- ..................................................
ET0015828      <-- ..................................................
ET0000845      <-- ..................................................
CT0009425      <-- ..................................................
CT0022562      <-- ..................................................
CT0060972      <-- ..................................................
CT0072704      <-- ..................................................
ET0028494      <-- ..................................................
CT0018862      <-- ..................................................
CT0038605      <-- ..................................................
CT0006037      <-- ..................................................
ET0083912      <-- ..................................................
ET0139326      <-- ..................................................
CT0040963      <-- ..................................................
CT0030494      <-- ..................................................
ET0102378      <-- ..................................................
ET0136662      <-- ..................................................
ET0011016      <-- ..................................................
CT0029943      <-- ..................................................
ET0083602      <-- ..................................................
ET0124291      <-- ..................................................
CT0098065      <-- ..................................................
CT0096684      <-- ..................................................
CT0072135      <-- ..................................................
ET0041178      <-- GATTTTGAGGAAGAA...................................
ET0091439      <-- GATTTTGAGGAAGA....................................
ET0101349      <-- GATTTTGAGGAAGAAG..................................
ET0109807      <-- GATTTTGAGGAAGAAG..................................
ET0101420      <-- GATTTTGAGGAAGAAG..................................
ET0102966      <-- GATTTTGAGGAAGAAG..................................
CT0099912      <-- GATTTTGAGGAAGAAGATG...............................
CT0068575      <-- ..................................................
CT0111752      <-- GATTTTGAGGAAGAAGA.................................
ET0049118      <-- GATTTTGAGGAAGAAG..................................
ET0129963      <-- GATTTTGAGGAAGAAG..................................
ET0054067      <-- GATTTT............................................
CT0081087      <-- GATTTTGAGGAAGAAGATGAGGGTTTTGGATTGCTTGTTTCTCAATTGTA
ET0088326      --> ..................................................
ET0089608      --> ..................................................
CT0083268      --> ..................................................
CT0091490      --> ..................................................
CT0011302      --> ..................................................
CT0016066      --> ..................................................
CT0030746      --> ..................................................
CT0037764      --> ..................................................
ET0021188      --> ..................................................
ET0054972      --> ..................................................
CT0031678      --> ..................................................
CT0007711      --> ..................................................
RH03B29        --> ..................................................
RH42BI60       --> ..................................................
CT0013413      --> ..................................................
CT0014739      --> ..................................................
CT0054753      --> ..................................................
ET0138597      --> ..................................................
CT0026977      --> ..................................................
CT0103575      --> ..................................................
ET0028545      --> ..................................................
ET0018101      --> ..................................................
ET0127707      --> ..................................................
ET0059535      --> ..................................................
CT0084934      --> ..................................................
CT0000563      --> ..................................................
CT0090215      --> ..................................................
CT0095437      --> ..................................................
CT0096173      --> ..................................................
CT0096260      --> ..................................................
CT0096561      --> ..................................................
CT0097932      --> ..................................................
CT0098058      --> ..................................................
CT0098191      --> ..................................................
CT0097278      --> ..................................................
CT0036874      --> ..................................................
CT0074238      --> ..................................................
CT0076555      --> ..................................................
CT0076785      --> ..................................................
ET0087386      --> ..................................................
CT0119761      --> ..................................................
ET0004224      --> ..................................................
ET0010571      --> ..................................................
ET0054909      --> ..................................................
ET0116028      --> ..................................................
ET0119017      --> ..................................................
CT0075265      --> ..................................................
CT0010323      --> ..................................................
CT0080469      --> ..................................................
CT0117513      --> ..................................................
ET0019222      --> ..................................................
ET0130727      --> ..................................................
ET0068510      --> ..................................................
ET0146686      --> ..................................................
CT0062411      --> ..................................................
CT0018422      --> ..................................................
CT0073544      --> ..................................................
CT0023117      --> ..................................................
CT0101522      --> ..................................................
CT0069096      --> ..................................................
ET0022665      --> ..................................................
CT0109270      --> ..................................................
ET0058198      --> ..................................................
ET0061399      --> ..................................................
ET0062260      --> ..................................................
ET0065669      --> ..................................................
ET0066498      --> ..................................................
ET0068572      --> ..................................................
ET0087508      --> ..................................................
ET0088833      --> ..................................................
ET0089424      --> ..................................................
ET0089555      --> ..................................................
ET0094170      --> ..................................................
ET0095092      --> ..................................................
ET0098287      --> ..................................................
ET0098343      --> ..................................................
ET0098532      --> ..................................................
ET0094030      --> ..................................................
ET0128751      --> ..................................................
ET0022822      --> ..................................................
ET0040592      --> ..................................................
CT0135432      --> ..................................................
ET0121305      --> ..................................................
CT0021267      --> ..................................................
CT0113225      --> ..................................................
CT0054610      --> ..................................................
CT0076849      --> ..................................................
CT0133077      --> ..................................................
CT0113065      --> ..................................................
CT0027963      --> ..................................................
CT0110565      --> ..................................................
ET0047551      --> ..................................................
ET0087976      --> ..................................................
CT0061128      --> ..................................................
CT0062234      --> ..................................................
CT0057224      --> ..................................................
ET0034606      --> ..................................................
CT0071729      --> ..................................................
CT0075141      --> ..................................................
CT0029770      --> ..................................................
ET0005385      --> GATTTTGAGGAA......................................
CT0028501      --> GATTTTGAGGAAGAAG..................................
CT0036744      --> GATTTTGAGGAAGAAG..................................
CT0090203      --> GATTTTGAGGAAGAAGA.................................
ET0059924      --> GATTTTGAGGAAGAAG..................................
ET0024349      --> GATTTTGAGGAAGAAG..................................
CT0021205      --> GATTTTGAGGAAGAAG..................................

               1451   -   1501
RU06324        --> ATCTGAAAGATAAATTTATAAAGGCAATTAATATCTTAAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0056792      <-- ..............................................
CT0128074      <-- ..............................................
CT0044305      <-- ..............................................
ET0016043      <-- ..............................................
ET0131501      <-- ..............................................
CT0068080      <-- ..............................................
CT0009636      <-- ..............................................
CT0056379      <-- ..............................................
ET0009855      <-- ..............................................
ET0032034      <-- ..............................................
ET0037255      <-- ..............................................
ET0070340      <-- ..............................................
ET0099695      <-- ..............................................
ET0025333      <-- ..............................................
ET0064637      <-- ..............................................
CT0029650      <-- ..............................................
CT0060374      <-- ..............................................
CT0003587      <-- ..............................................
ET0142983      <-- ..............................................
CT0005944      <-- ..............................................
ET0031292      <-- ..............................................
ET0065087      <-- ..............................................
RH59CF19       <-- ..............................................
RH39BD57       <-- ..............................................
ET0090775      <-- ..............................................
ET0099441      <-- ..............................................
CT0138619      <-- ..............................................
ET0035642      <-- ..............................................
ET0050823      <-- ..............................................
ET0021587      <-- ..............................................
ET0041201      <-- ..............................................
ET0019136      <-- ..............................................
ET0053739      <-- ..............................................
ET0044226      <-- ..............................................
ET0128543      <-- ..............................................
ET0015335      <-- ..............................................
ET0113599      <-- ..............................................
ET0119502      <-- ..............................................
ET0124037      <-- ..............................................
ET0126783      <-- ..............................................
ET0091613      <-- ..............................................
ET0076298      <-- ..............................................
ET0071033      <-- ..............................................
ET0071801      <-- ..............................................
ET0073594      <-- ..............................................
ET0074888      <-- ..............................................
ET0078012      <-- ..............................................
ET0065484      <-- ..............................................
ET0105783      <-- ..............................................
ET0102398      <-- ..............................................
ET0077058      <-- ..............................................
CT0075837      <-- ..............................................
ET0136632      <-- ..............................................
CT0015356      <-- ..............................................
CT0076633      <-- ..............................................
ET0066708      <-- ..............................................
CT0115598      <-- ..............................................
ET0067580      <-- ..............................................
ET0019626      <-- ..............................................
ET0110992      <-- ..............................................
ET0015828      <-- ..............................................
ET0000845      <-- ..............................................
CT0009425      <-- ..............................................
CT0022562      <-- ..............................................
CT0060972      <-- ..............................................
CT0072704      <-- ..............................................
ET0028494      <-- ..............................................
CT0018862      <-- ..............................................
CT0038605      <-- ..............................................
CT0006037      <-- ..............................................
ET0083912      <-- ..............................................
ET0139326      <-- ..............................................
CT0040963      <-- ..............................................
CT0030494      <-- ..............................................
ET0102378      <-- ..............................................
ET0136662      <-- ..............................................
ET0011016      <-- ..............................................
CT0029943      <-- ..............................................
ET0083602      <-- ..............................................
ET0124291      <-- ..............................................
CT0098065      <-- ..............................................
CT0096684      <-- ..............................................
CT0072135      <-- ..............................................
ET0041178      <-- ..............................................
ET0091439      <-- ..............................................
ET0101349      <-- ..............................................
ET0109807      <-- ..............................................
ET0101420      <-- ..............................................
ET0102966      <-- ..............................................
CT0099912      <-- ..............................................
CT0068575      <-- ..............................................
CT0111752      <-- ..............................................
ET0049118      <-- ..............................................
ET0129963      <-- ..............................................
ET0054067      <-- ..............................................
CT0081087      <-- ATCTGAAAGATAAATTTATAAAGGCAATTAATATCTTAAAAAAAAA
ET0088326      --> ..............................................
ET0089608      --> ..............................................
CT0083268      --> ..............................................
CT0091490      --> ..............................................
CT0011302      --> ..............................................
CT0016066      --> ..............................................
CT0030746      --> ..............................................
CT0037764      --> ..............................................
ET0021188      --> ..............................................
ET0054972      --> ..............................................
CT0031678      --> ..............................................
CT0007711      --> ..............................................
RH03B29        --> ..............................................
RH42BI60       --> ..............................................
CT0013413      --> ..............................................
CT0014739      --> ..............................................
CT0054753      --> ..............................................
ET0138597      --> ..............................................
CT0026977      --> ..............................................
CT0103575      --> ..............................................
ET0028545      --> ..............................................
ET0018101      --> ..............................................
ET0127707      --> ..............................................
ET0059535      --> ..............................................
CT0084934      --> ..............................................
CT0000563      --> ..............................................
CT0090215      --> ..............................................
CT0095437      --> ..............................................
CT0096173      --> ..............................................
CT0096260      --> ..............................................
CT0096561      --> ..............................................
CT0097932      --> ..............................................
CT0098058      --> ..............................................
CT0098191      --> ..............................................
CT0097278      --> ..............................................
CT0036874      --> ..............................................
CT0074238      --> ..............................................
CT0076555      --> ..............................................
CT0076785      --> ..............................................
ET0087386      --> ..............................................
CT0119761      --> ..............................................
ET0004224      --> ..............................................
ET0010571      --> ..............................................
ET0054909      --> ..............................................
ET0116028      --> ..............................................
ET0119017      --> ..............................................
CT0075265      --> ..............................................
CT0010323      --> ..............................................
CT0080469      --> ..............................................
CT0117513      --> ..............................................
ET0019222      --> ..............................................
ET0130727      --> ..............................................
ET0068510      --> ..............................................
ET0146686      --> ..............................................
CT0062411      --> ..............................................
CT0018422      --> ..............................................
CT0073544      --> ..............................................
CT0023117      --> ..............................................
CT0101522      --> ..............................................
CT0069096      --> ..............................................
ET0022665      --> ..............................................
CT0109270      --> ..............................................
ET0058198      --> ..............................................
ET0061399      --> ..............................................
ET0062260      --> ..............................................
ET0065669      --> ..............................................
ET0066498      --> ..............................................
ET0068572      --> ..............................................
ET0087508      --> ..............................................
ET0088833      --> ..............................................
ET0089424      --> ..............................................
ET0089555      --> ..............................................
ET0094170      --> ..............................................
ET0095092      --> ..............................................
ET0098287      --> ..............................................
ET0098343      --> ..............................................
ET0098532      --> ..............................................
ET0094030      --> ..............................................
ET0128751      --> ..............................................
ET0022822      --> ..............................................
ET0040592      --> ..............................................
CT0135432      --> ..............................................
ET0121305      --> ..............................................
CT0021267      --> ..............................................
CT0113225      --> ..............................................
CT0054610      --> ..............................................
CT0076849      --> ..............................................
CT0133077      --> ..............................................
CT0113065      --> ..............................................
CT0027963      --> ..............................................
CT0110565      --> ..............................................
ET0047551      --> ..............................................
ET0087976      --> ..............................................
CT0061128      --> ..............................................
CT0062234      --> ..............................................
CT0057224      --> ..............................................
ET0034606      --> ..............................................
CT0071729      --> ..............................................
CT0075141      --> ..............................................
CT0029770      --> ..............................................
ET0005385      --> ..............................................
CT0028501      --> ..............................................
CT0036744      --> ..............................................
CT0090203      --> ..............................................
ET0059924      --> ..............................................
ET0024349      --> ..............................................
CT0021205      --> ..............................................