SNPs of unigene RU06598
               1      -     51
RU06598        --> GTTTAACTTTATTTGTTACTTTCTTTCTTTTAAGGTTTAGTCCTAAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> GTTTAACTTTATTTGTTACTTTCTTTCTTTTAAGGTTTAGTCCTAAATTG
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               51     -    101
RU06598        --> TCCTTCGTTCTATTCTTAATTTAGTGACGCGCATGAATGGATTAACGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> TCCTTCGTTCTATTCTTAATTTAGTGACGCGCATGAATGGATTAACGAGA
ET0008972      --> ......................AGTGACGCGCATGAATGGATTAACGAGA
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               101    -    151
RU06598        --> TTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> TTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGG
ET0008972      --> TTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGG
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               151    -    201
RU06598        --> GCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> GCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGT
ET0008972      --> GCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGT
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               201    -    251
RU06598        --> CCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGG-AGCCTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> CCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGGAGCCTTCG
ET0008972      --> CCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGG-AGCCTTCG
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               251    -    301
RU06598        --> GG-CGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> GGGCGAAAGTGAAATACCACTACTTTTAACGTT.................
ET0008972      --> GG-CGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTC
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               301    -    351
RU06598        --> CGATTGCCGACCCGCAGTAGGGGCCCTAGGCCCCCAAAGGCACGTGTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> CGATTGCCGACCCGCAGTAGGGGCCCTAGGCCCCCAAAGGCA........
CT0028700      --> ....TGCCGACCCGCAGTAGGGGCCCTAGGCCCCCAAAGGCACGTGTCGT
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               351    -    401
RU06598        --> TGGGGGCCTAGGGCCCCTACTGCGGGTCGGCAATCGGACGGCGGGCGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> TGGGGGCCTAGGGCCCCTACTGCGGGTCGGCAATCGGACGGCGGGCGCAT
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               401    -    451
RU06598        --> GCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- .................................CGTTCAGTCATAATCCA
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> GCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCA
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               451    -    501
RU06598        --> GCGCACGGTAGCTTCGCGCCACTGGCTTTTC-AACCAAGCGCGATGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- GCGCACGGTAGCTTCGCGCCACTGGCTTTTC-AACCAAGCGCGATGACCA
ET0137833      <-- .CGCACGGTAGCTTCGCGCCACTGGCTTTTC-AACCAAGCGCGATGACCA
ET0140634      <-- .CGCACGGTAGCTTCGCGCCACTGGCTTTTC-AACCAAGCGCGATGACCA
ET0041270      <-- ....................cCTGGCTTTTCTAACCAAGCGCGATGACCA
ET0103906      <-- .........................................CGATGACCA
ET0106736      <-- ..........................................GATGACCA
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> GCGCACGGTAGCTTCGCGCCACTGGCTTTTC-AACCAAGCGCGATGACCA
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               501    -    551
RU06598        --> ATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGG
ET0137833      <-- ATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGA
ET0140634      <-- ATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGA
ET0041270      <-- ATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGA
ET0103906      <-- ATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGA
ET0106736      <-- ATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGA
ET0071977      <-- ..TGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGA
ET0079758      <-- ...................cgTCTCGTACTAGGTTGAATTACTATTGCGA
ET0133021      <-- ........................CGTACTAGGTTGAATTACTATTGCGA
ET0100196      <-- .........................GTACTAGGTTGAATTACTATTGCGA
ET0079738      <-- ................................GTTGAATTACTATTGCGA
ET0075917      <-- ...............................................CGA
ET0076322      <-- ...............................................CGA
ET0075201      <-- ................................................GA
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAA............
CT0099629      --> ...........................ACTAGGTTGAATTACTATTGCGA
RH42BI45       --> ...........................ACTAGGTTGAATTACTATTGCGA
RH56CE1        --> ...........................ACTAGGTTGAATTACTATTGCGA

               551    -    601
RU06598        --> CACTGTCATCAGTAGGG-T-AAAACTAA-CCT-GTCTCACGACGGTCTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- CACTGTCATCAGTAGGG-T-AAAACTAA-CCT-GTCTCACGACGGTCTAA  Control
ET0137833      <-- CACTGTCATCAGTAGGG-T-AAAACTAA-CCT-GTCTCACGACGGTCTAA  Ethylene
ET0140634      <-- CACTGTCATCAGTAGGG-T-AAAACTAA-CCT-GTCTCACGACGGTCTAA  Ethylene
ET0041270      <-- CACTGTCATCAGTAGGG-T-AAAACTAAACCT-GTCTCACGACGGTCTAA  Ethylene
ET0103906      <-- CACTGTCATCAGTAGGG-T-AAAACTAAACCT-GTCTCACGACGGTCTAA  Ethylene
ET0106736      <-- CACTGTCATCAGTAGGG-T-AAAACTAAACCT-GTCTCACGACGGTCTAA  Ethylene
ET0071977      <-- CACTGTCATCAGTAGGGGT-AAAACTAAACCT-GTCTCACGACGGTCTAA  Ethylene
ET0079758      <-- CACTGTCATCA-T-GGG-T-AAAACTAAACCT-GTCTCACGACGGTCTAA  Ethylene
ET0133021      <-- CACTGTCATCAGTAGGG-T-AAAACTAA-CCT-GTCTCACGACGGTCTAA  Ethylene
ET0100196      <-- CACTGTCATCAGTAGGG-T-AAAACTAAACCT-GTCTCACGACGGTCTAA  Ethylene
ET0079738      <-- CACTGTCATCAGTAGGG-T-AAAACTAAACCT-GTCTCACGACGGTCTAA  Ethylene
ET0075917      <-- CACTGTCATCAGTAGGG-T-AAAACTAAACCT-GTCTCACGACGGTCTAA  Ethylene
ET0076322      <-- CACTGTCATCA-TAGGG-T-AAAACTAAACCT-GTCTCACGACGGTCTAA  Ethylene
ET0075201      <-- CACTGTCATCAGTAGGG-TTAAAACTAAACCTAGTCTCACGACGGTCTAA  Ethylene
ET0145668      <-- ..................................................  Ethylene
ET0095802      <-- ..................................................  Ethylene
ET0091152      <-- ..................................................  Ethylene
ET0103930      <-- ..................................................  Ethylene
CT0057363      <-- ..................................................  Control
ET0054663      <-- ..................................................  Ethylene
ET0108797      <-- ..................................................  Ethylene
ET0075148      <-- ..................................................  Ethylene
CT0117880      <-- ..................................................  Control
ET0064547      --> ..................................................  Ethylene
ET0008972      --> ..................................................  Ethylene
CT0028700      --> ..................................................  Control
CT0099629      --> CACTGTCATCAGTAGGG-T-AAAACTAAACCT-GTCTCACGACGGTCTAA  Control
RH42BI45       --> CACTGTCATCAGTAGGG-T-AAAACCAA-CCT-GTCTCACGACGGTCTAA  WaterDS
RH56CE1        --> CACTGTCATCAGTAGGG-T-AAAACCAA-CCT-GTCTCACGACGGTCTAA  WaterDS

               601    -    651
RU06598        --> TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
ET0137833      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
ET0140634      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
ET0041270      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
ET0103906      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
ET0106736      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGA-CAATCCAACACTTGGTGAA
ET0071977      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
ET0079758      <-- TCCCAGCTCACGTTCCCTATTG-TGGGTGA-CAATCCAACACTTGGTGAA
ET0133021      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
ET0100196      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTG-TGAA
ET0079738      <-- TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
ET0075917      <-- TCCCAGCTCACGTTCCCTATTG-TGGGTGA-CAATCCAACACTTGGTGAA
ET0076322      <-- TCCCAGCTCACGTTCCCTATTG-TGGGTGAACAATCCAACACTTGGTGAA
ET0075201      <-- TCCCAGCTCACGTTCCCTATTG-TGGGTGAACAATCCAACACTTGGTGAA
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
RH42BI45       --> TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA
RH56CE1        --> TCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAA

               651    -    701
RU06598        --> TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- TTCTGCTTCACAATGATAGGAAGAGCCGA.....................
ET0137833      <-- TTCTGCTTCACAATGATAGGAAGAGCCGAGATCGAAGGATCAAAAA-GCA
ET0140634      <-- TTCTGCTTCACAATGATAGGAAGAGCCGAGATCGAAGGATCAAAAA-GCA
ET0041270      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0103906      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0106736      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0071977      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0079758      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAAGCA
ET0133021      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0100196      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0079738      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0075917      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0076322      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0075201      <-- TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
RH42BI45       --> TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA
RH56CE1        --> TTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAA-GCA

               701    -    751
RU06598        --> ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- AC................................................
ET0140634      <-- AC................................................
ET0041270      <-- ACGTCGCTATGAACGCTTGGCTG...........................
ET0103906      <-- ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCC.......
ET0106736      <-- ACGTCGCTATGAACGCTTGGCTGTCCTACTAAGCCAGTTATCC.......
ET0071977      <-- ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
ET0079758      <-- ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
ET0133021      <-- ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
ET0100196      <-- ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
ET0079738      <-- ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
ET0075917      <-- ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
ET0076322      <-- ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
ET0075201      <-- ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
ET0145668      <-- ....................................GTTATCCCTGTGGT
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
RH42BI45       --> ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT
RH56CE1        --> ACGTCGCTATGAACGCTTGGCTG-CC-AC-AAGCCAGTTATCCCTGTGGT

               751    -    801
RU06598        --> AACTTTTCTGACACCTCTAGCTTT-AAAATTCC-AAAAGGTCTAAA-GGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- AAa...............................................
ET0079758      <-- AACTTTTCTGACACCTCTAGCTTT-AA.......................
ET0133021      <-- AACTTTTCTGACACCTCTAGCTTTTAAAATTtct................
ET0100196      <-- AACTTTTCTGACACCTCTAGCTTT-AAAATTCC-A...............
ET0079738      <-- AACTTTTCTGACACCTCTAGCTTT-AAAATTCC-A...............
ET0075917      <-- AACTTTTCTGACACCTCTAGCTTT-AAA-TTCC-AAA-GGTCTAAA-GGA
ET0076322      <-- AACTTTTCTGACACCTCTAGCTTT-AAA-TTCC-AAA-GGTCTAAA-GGA
ET0075201      <-- AACTTTTCTGACACCTCTAGCTTT-AAAATTCC-AAAAGGTCTAAAAGGA
ET0145668      <-- AACTTT-CTGACACCTCTAGCTTT-AAAATTCCTAAAAGGTCT.......
ET0095802      <-- ....................CTTT-AAA-TTCC-AAA-GGTCTAAA-GGA
ET0091152      <-- ........................ttAAATTCC-AAA-GGTCTAAA-GGA
ET0103930      <-- ........................ttAAATTCC-AAA-GGTCTAAA-GGA
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> AACTTTTCTGACACCTCTAGCTTT-AAA......................
RH42BI45       --> AACTTTTCTGACACCTCTAGCTTT-AAA-TTCC-AAA-GGTCTAAA-GGA
RH56CE1        --> AACTTTTCTGACACCTCTAGCTTT-AAA-TTCC-AAA-GGTCTAAA-GGA

               801    -    851
RU06598        --> TCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- TCGATAGGC.........................................
ET0076322      <-- TCGATAGGC.........................................
ET0075201      <-- TCGATAGGC.........................................
ET0145668      <-- ..................................................
ET0095802      <-- TCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCA
ET0091152      <-- TCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCA
ET0103930      <-- TCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCA
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> TCGATAGGCCACGCTTTCACGGTTCGTATTCGT.................
RH56CE1        --> TCGATAGGCCACGCTTTCACGGTTCGTATTCGT.................

               851    -    901
RU06598        --> AACGAGCTTTTACCCTTTT-GTT-CCACACGAGATTTCTGTTCTCGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- AACGAGCTTTTACCCTTTT-GTT-CCACACGAGATTTCTGTTCTCGTTGA
ET0091152      <-- AACGAGCTTTTACCCTTTT-GTTTCCACACGAGATTTCTGTTCTCGTTGA
ET0103930      <-- AACGAGCTTTTACCCTTTTTGTT-CCACACGAGATTTCTGTTCTCGTTGA
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               901    -    951
RU06598        --> GCTCATCTTAGAACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- GCTCATCTTAGAACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGC
ET0091152      <-- GCTCATCTTAGAACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGC
ET0103930      <-- GCTCATCTTAGAACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGC
CT0057363      <-- ....ggatgtctaaACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGC
ET0054663      <-- ..................................................
ET0108797      <-- ..................................................
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               951    -   1001
RU06598        --> CAAACTCCCC-ACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- CAAACTCCCC-ACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGC
ET0091152      <-- CAAACTCCCC-ACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGC
ET0103930      <-- CAAACTCCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGC
CT0057363      <-- CAAACTCCCC-ACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGC
ET0054663      <-- .................................................C
ET0108797      <-- .................................................C
ET0075148      <-- ..................................................
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               1001   -   1051
RU06598        --> AGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- AGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAA
ET0091152      <-- AGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAA
ET0103930      <-- AGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAA
CT0057363      <-- AGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAA
ET0054663      <-- AGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAA
ET0108797      <-- AGGCTTTGGGTCCAAAA-GAGGGGCAGTGCCCCGCCTCCGATTCACGGAA
ET0075148      <-- .............AAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAA
CT0117880      <-- ..................................................
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               1051   -   1101
RU06598        --> ATAAAGTAAAAA-T-AAA-CGTTAAAAA-GTAAAGTA-GGTAAATTTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ATAAAGTAAAAA-T-AAAACGTTAAAAAAGTAAAGTAAGGTAAATTTAAC
ET0054663      <-- ATAAA.............................................
ET0108797      <-- ATAAAGTAAAAA-T-AAA-CGTTAAAAA-GTAAAGTA-GGTAAATTTAAC
ET0075148      <-- ATAAAGT...........................................
CT0117880      <-- ..AAAGTAAAAAATAAAA-CGTTAAAAAAGTAAAGTAAGGTAAATTTAAC
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               1101   -   1151
RU06598        --> AAACTTTAA-CGAAACCCGAAAAAGGAAACTAAAACCCAAAACTTAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0063913      <-- ..................................................
ET0137833      <-- ..................................................
ET0140634      <-- ..................................................
ET0041270      <-- ..................................................
ET0103906      <-- ..................................................
ET0106736      <-- ..................................................
ET0071977      <-- ..................................................
ET0079758      <-- ..................................................
ET0133021      <-- ..................................................
ET0100196      <-- ..................................................
ET0079738      <-- ..................................................
ET0075917      <-- ..................................................
ET0076322      <-- ..................................................
ET0075201      <-- ..................................................
ET0145668      <-- ..................................................
ET0095802      <-- ..................................................
ET0091152      <-- ..................................................
ET0103930      <-- ..................................................
CT0057363      <-- ..................................................
ET0054663      <-- ..................................................
ET0108797      <-- AAACTTTAA-CGAAACCCGAAAAAag........................
ET0075148      <-- ..................................................
CT0117880      <-- AAACTTTAAACGAAACCCGAAAAAGGAAACTAAAACCCAAAACTTAAAAT
ET0064547      --> ..................................................
ET0008972      --> ..................................................
CT0028700      --> ..................................................
CT0099629      --> ..................................................
RH42BI45       --> ..................................................
RH56CE1        --> ..................................................

               1151   -   1201
RU06598        --> AAAA
                   ~~~~
CT0063913      <-- ....
ET0137833      <-- ....
ET0140634      <-- ....
ET0041270      <-- ....
ET0103906      <-- ....
ET0106736      <-- ....
ET0071977      <-- ....
ET0079758      <-- ....
ET0133021      <-- ....
ET0100196      <-- ....
ET0079738      <-- ....
ET0075917      <-- ....
ET0076322      <-- ....
ET0075201      <-- ....
ET0145668      <-- ....
ET0095802      <-- ....
ET0091152      <-- ....
ET0103930      <-- ....
CT0057363      <-- ....
ET0054663      <-- ....
ET0108797      <-- ....
ET0075148      <-- ....
CT0117880      <-- AAAA
ET0064547      --> ....
ET0008972      --> ....
CT0028700      --> ....
CT0099629      --> ....
RH42BI45       --> ....
RH56CE1        --> ....