SNPs of unigene RU06682
               1      -     51
RU06682        --> GGTGTCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGAAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> GGTGTCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGAAAAAAAA
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               51     -    101
RU06682        --> AAAAAAAAAAAAACCCTGCGTCGCTTCGATTCGTCTGCAAAGGATTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> AAAAAAAAAAAAACCCTGCGTCGCTTCGATTCGTCTGCAAAGGATTCTAC
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               101    -    151
RU06682        --> CCGCCGCTCGGTAGAAATTGTAATTCAAGGCGGCCCTTTTTTTTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> CCGCCGCTCGGTAGAAATTGTAATTCAAGGCGGCCCTTTTTTTTTTTTTT
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               151    -    201
RU06682        --> TTTTTTTTTTTTTTTCGCAGCTTGTCTGCTGTG-AGGGC-TTCACCAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- .......................GTCTGCTGTG-AGGGCGTTCACCAACG
ET0096290      <-- ......tgaagccctcacagcagacaaGCTGCG-AGGGC-TTCACCAACG
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> TTTTTTTTTTTTTTTCGCAGCTTGTCTGCTGTGGAGGGC-TTCACCAACG
CT0020499      --> ..........gcccTCGCAGCTTGTCTGCTGTG-AGGGC-TTCACCAACG
ET0002148      --> ..........gcccTCGCAGCTTGTCTGCTGTG-AGGGC-TTCACCAACG
ET0011735      --> ..........gcccTCGCAGCTTGTCTGCTGTG-AGGGC-TTCACCAACG
ET0049217      --> ..........gcccTCGCAGCTTGTCTGCTGTG-AGGGC-TTCACCAACG
ET0067865      --> ..........gcccTCGCAGCTTGTCTGCTGTG-AGGGC-TTCACCAACG
ET0083413      --> ..........gcccTCGCAGCTTGTCTGCTGTG-AGGGC-TTCACCAACG
ET0087231      --> ..........gcccTCGCAGCTTGTCTGCTGTG-AGGGC-TTCACCAACG
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               201    -    251
RU06682        --> ACACGTGCCTTTGGGGGCC-TAGGGCCCC-TA-CTGCGGGTCGGCAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ACACGTGCCTTTGGGGGCCGTAGGGCCCCGTACCTGCGGGTCGGCAATCG
ET0096290      <-- ACACGTGCCTTTGGG...................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ACACGTGtccgtttcgggg...............................
CT0020499      --> ACACGTGCCTTTGGGGGCC-TAGGGCCCC-TA-CTGCGGGTCGGCAATCG
ET0002148      --> ACACGTGCCTTTGGGGGCC-TAGGGCCCC-TA-CTGCGGGTCGGCAATCG
ET0011735      --> ACACGTGCCTTTGGGGGCC-TAGGGCCCC-TA-CTGCGGGTCGGCAATCG
ET0049217      --> ACACGTGCCTTTGGGGGCC-TAGGGCCCC-TA-CTGCGGGTCGGCAATCG
ET0067865      --> ACACGTGCCTTTGGGGGCC-TAGGGCCCC-TA-CTGCGGGTCGGCAATCG
ET0083413      --> ACACGTGCCTTTGGGGGCC-TAGGGCCCC-TA-CTGCGGGTCGGCAATCG
ET0087231      --> ACACGTGCCTTTGGGGGCC-TAGGGCCCC-TA-CTGCGGGTCGGCAATCG
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               251    -    301
RU06682        --> GACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGG-CG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- GACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGGCG
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> GACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGG-CG
ET0002148      --> GACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGG-CG
ET0011735      --> GACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGG-CG
ET0049217      --> GACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGG-CG
ET0067865      --> GACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGG-CG
ET0083413      --> GACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGG-CG
ET0087231      --> GACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGG-CG
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               301    -    351
RU06682        --> TTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- TTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACC
ET0096290      <-- ..................................................
CT0081218      <-- .............................CGCGCCACTGGCTTTTCAACC
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> TTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCA..............
ET0002148      --> TTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACC
ET0011735      --> TTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACC
ET0049217      --> TTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACC
ET0067865      --> TTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACC
ET0083413      --> TTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACC
ET0087231      --> TTCAGTCATAATCCAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACC
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               351    -    401
RU06682        --> AAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- AAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTG
ET0096290      <-- ..................................................
CT0081218      <-- AAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTG
ET0147093      <-- ......GATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTG
CT0054013      <-- ......................AATCAACGGTTCCTCTCGTACTAGGTTG
CT0070455      <-- ......................AATCAACGGTTCCTCTCGTACTAGGTTG
ET0144585      <-- .....................................TCGTACTAGGTTG
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> AAG...............................................
ET0011735      --> AAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTG
ET0049217      --> AAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTG
ET0067865      --> AAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTG
ET0083413      --> AAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTG
ET0087231      --> AAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTG
CT0094046      --> .......................................GTACTAGGTTG
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               401    -    451
RU06682        --> AATTACTATTGCGACACTGTCATCAGTAGGG-TAAAACTAA-CCTGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- AATTACTATTGCGACACT................................  Ethylene
ET0096290      <-- ..................................................  Ethylene
CT0081218      <-- AATTACTATTGCGACACTGTCATCAGTAGGG-TAAAACTAA-CCTGTCTC  Control
ET0147093      <-- AATTACTATTGCGACACTGTCATCAGTAGGGGTAAAACTAA-CCTGTCTC  Ethylene
CT0054013      <-- AATTACTATTGCGACACTGTCATCAGTAGGG-TAAAACTAA-CCTGTCTC  Control
CT0070455      <-- AATTACTATTGCGACACTGTCATCAGTAGGG-TAAAACTAA-CCTGTCTC  Control
ET0144585      <-- AATTACTATTGCGACACTGTCATCAGTAGGGGTAAAACTAAACCTGTCTC  Ethylene
ET0071851      <-- ..................................................  Ethylene
ET0057525      <-- ..................................................  Ethylene
ET0080270      <-- ..................................................  Ethylene
ET0142362      <-- ..................................................  Ethylene
CT0037479      --> ..................................................  Control
CT0020499      --> ..................................................  Control
ET0002148      --> ..................................................  Ethylene
ET0011735      --> AATTACTA..........................................  Ethylene
ET0049217      --> AATTACTA..........................................  Ethylene
ET0067865      --> AATTACTAT.........................................  Ethylene
ET0083413      --> AATTACTAT.........................................  Ethylene
ET0087231      --> AATTACTATTG.......................................  Ethylene
CT0094046      --> AATTACTATTGCGACACTGTCATCAGTAGGG-TAAAACTAA-CCTGTCTC  Control
CT0072289      --> ..................................................  Control
ET0007289      --> ..................................................  Ethylene
ET0029937      --> ..................................................  Ethylene
CT0134066      --> ..................................................  Control
ET0123490      --> ..................................................  Ethylene

               451    -    501
RU06682        --> ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGG-TGAACAATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGG-TGAACAATCC
ET0147093      <-- ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGG-TGAACAATCC
CT0054013      <-- ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGG-TGAACAATCC
CT0070455      <-- ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGG-TGAACAATCC
ET0144585      <-- ACGACGGTCTAAACCCAGCTCACGTCCCCTATTGGTGGGGTGAACAATCC
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGG-TGAACAATCC
CT0072289      --> ..............CCAGCTCACGTTCCCTATTGGTGGG-TGAACAATCC
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               501    -    551
RU06682        --> AACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- AACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG
ET0147093      <-- AACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG
CT0054013      <-- AACACTTGGTGAATTCTGCTTC--AATGATAGGAAGAGCCGACATCGAAG
CT0070455      <-- AACACTTGGTGAATTCTGCTTC--AATGATAGGAAGAGCCGACATCGAAG
ET0144585      <-- AACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> AACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG
CT0072289      --> AACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAG
ET0007289      --> ....................................AGCCGACATCGAAG
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               551    -    601
RU06682        --> GATCAAAA-GGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- GATCAAAA-GGCAACGTCGCTATGAACGCTT...................
ET0147093      <-- GATCAAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA
CT0054013      <-- GATCAAA...........................................
CT0070455      <-- GATCAAA...........................................
ET0144585      <-- GATCAAAA-GGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA
ET0071851      <-- .............ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA
ET0057525      <-- .................................CTGCCACAAGCCAGTTA
ET0080270      <-- .................................CTGCCACAAGCCAGTTA
ET0142362      <-- ...................................GCCACAAGCCAGTTA
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> GATCAAAA-G........................................
CT0072289      --> GATCAAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA
ET0007289      --> GATCAAAA-GGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA
ET0029937      --> ..................................................
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               601    -    651
RU06682        --> TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTA
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTA
ET0071851      <-- TCCCTGTGGTAACTTTTCTGACACCTCTGGCTTTAAATTCCAAAGGTCTA
ET0057525      <-- TCCCTGTGGTAACTTTTCTAACACCTCTAGCTTTAAATTCCAAAGGTCTA
ET0080270      <-- TCCCTGTGGTAACTTTTCTAACACCTCTAGCTTTAAATTCCAAAGGTCTA
ET0142362      <-- TCCCTGTGGTAACTTTTCTAACACCTCTAGCTTTAAATTCCAAAGGTCTA
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTA
ET0007289      --> TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTA
ET0029937      --> .....................CACCTCTAGCTTTAAATTCCAAAGGTCTA
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               651    -    701
RU06682        --> AAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- AAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCG.............
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- AAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAG
ET0071851      <-- AAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAG
ET0057525      <-- AAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAG
ET0080270      <-- AAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAG
ET0142362      <-- AAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAG
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> AAGG..............................................
ET0007289      --> AAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAG
ET0029937      --> AAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAG
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               701    -    751
RU06682        --> AATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- AATCAAACGAGCTTTTACCCTTc...........................
ET0071851      <-- AATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGT
ET0057525      <-- AATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGT
ET0080270      <-- AATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGT
ET0142362      <-- AATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTtcttg.....
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> AATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGT
ET0029937      --> AATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGT
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               751    -    801
RU06682        --> TGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- TGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCC
ET0057525      <-- TGA...............................................
ET0080270      <-- TGA...............................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> TGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCcg...
ET0029937      --> TGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCC
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               801    -    851
RU06682        --> -AGCCAAA-CTCCCCACC-TGACAATGTCTTCCGCCCGGATCAGCCCGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- CAGCCAAAACTCCCCACCCTGACAAT........................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> -AGCCAAA-CTCCCCACC-TGACAATGTCTTCCGCCCAGATCAGCCCGCC
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               851    -    901
RU06682        --> GAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCcccgcctccgattca
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> GAAGCAGGCTTTGGG-CCAAAAAG-GGGGCAGTGC...............
CT0134066      --> ..................................................
ET0123490      --> ..................................................

               901    -    951
RU06682        --> cggaataagtaaaataacgttaaaagtagtggAAACAAAGAAGCGTCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ................................AAACAAAGAAGCGTCTCT
ET0123490      --> ....................................AAAGAAGCGTCTCT

               951    -   1001
RU06682        --> ATCTCATTCTCTCTCACTTGTAAGAGTAAGACAAAGTTTCAAGCACCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> ATCTCACTCTCTCTCACTTGTAAGAGTAAGACAAAGTTTCAAGCACCGTG
ET0123490      --> ATCTCACTCTCTCTCACTTGTAAGAGTAAGACAAAGTTTCAAGCACCGTG

               1001   -   1051
RU06682        --> TTGATAAGAAGAAGAAGAAGAAATTACTGTATAGGTATGAAGGAAGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> TTGATAAGAAGAAGAAGAAGAAATTACTGTATAGGTATGAAGGAAGACCA
ET0123490      --> TTGATAAGAAGAAGAAGAAGAAATTACTGTATAGGTATGAAGGAAGACCA

               1051   -   1101
RU06682        --> AAGCAACAGCAGCAGCAACAGAAACTTCTGCAGTAAGCACGTGCAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> AAGCAACAGCAGCAGCAACAGAAACTTCTGCAGTAAGCACGTGCAAGAAC
ET0123490      --> AAGCAACAGCAGCAGCAACAGAAACTTCTGCAGTAAGCACGTGCAAGAAC

               1101   -   1151
RU06682        --> AAAACAGCAGCAGCAGCAACAGCAACAACTTCTGCAGTAAGCACGTGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> AAAACAGCAGCAGCAGCAACAGCAACAACTTCTGCAGTAAGCACGTGCGA
ET0123490      --> AAAACAGCAGCAGCAGCAACAGCAACAACTTCTGCAGTAAGCACGTGCGA

               1151   -   1201
RU06682        --> GACCCGTGCAGATCGTTTGGGCGGAGATGCAGTATGCTGGTGAAGGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- ..................................................
ET0096290      <-- ..................................................
CT0081218      <-- ..................................................
ET0147093      <-- ..................................................
CT0054013      <-- ..................................................
CT0070455      <-- ..................................................
ET0144585      <-- ..................................................
ET0071851      <-- ..................................................
ET0057525      <-- ..................................................
ET0080270      <-- ..................................................
ET0142362      <-- ..................................................
CT0037479      --> ..................................................
CT0020499      --> ..................................................
ET0002148      --> ..................................................
ET0011735      --> ..................................................
ET0049217      --> ..................................................
ET0067865      --> ..................................................
ET0083413      --> ..................................................
ET0087231      --> ..................................................
CT0094046      --> ..................................................
CT0072289      --> ..................................................
ET0007289      --> ..................................................
ET0029937      --> ..................................................
CT0134066      --> GACCCGTGCAGATCGTTTGGGCGGAGATGCAGTATGCTGGTGAAGGAGCA
ET0123490      --> GACCCGTG..........................................

               1201   -   1251
RU06682        --> AAGGGCAAGGTTCTATATACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~
ET0021609      <-- .......................
ET0096290      <-- .......................
CT0081218      <-- .......................
ET0147093      <-- .......................
CT0054013      <-- .......................
CT0070455      <-- .......................
ET0144585      <-- .......................
ET0071851      <-- .......................
ET0057525      <-- .......................
ET0080270      <-- .......................
ET0142362      <-- .......................
CT0037479      --> .......................
CT0020499      --> .......................
ET0002148      --> .......................
ET0011735      --> .......................
ET0049217      --> .......................
ET0067865      --> .......................
ET0083413      --> .......................
ET0087231      --> .......................
CT0094046      --> .......................
CT0072289      --> .......................
ET0007289      --> .......................
ET0029937      --> .......................
CT0134066      --> AAGGGCAAGGTTCTATATACTCC
ET0123490      --> .......................