SNPs of unigene RU19839
               1      -     51
RU19839        --> GGCAACCAAAAAACTCCGTTCATATAAATGAAAGAAACATCAAGTCTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> GGCAACCAAAAAACTCCGTTCATATAAATGAAAGAAACATCAAGTCTAGC
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               51     -    101
RU19839        --> CACCAATATGTTTTCAAGATAAGAACTTGTTTAACATTTGGATAACCCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ...tttttTGTTTTCAAGATAAGAACTTGTTTAACATTTGGATAACCCGA
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> CACCAATATGTTTTCAAGATAAGAACTTGTTTAACATTTGGATAACCCGA
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               101    -    151
RU19839        --> TGAACAATGCACTCAGACGCATAACTACAACTGTGACCATACATCGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- TGAACAATGCACTCAGACGCATAACTACAACTGTGACCATACATCGCCAA
ET0067294      <-- ...................CATAACTACAACTGTGACCATACATCGCCAA
ET0127604      <-- .................................gtACCATACATCGCCAA
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> TGAACAATGCACTCAGACGCATAACTACAACTGTGACCATACATCGCCAA
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               151    -    201
RU19839        --> TCATTAAA-TTTCATTGCATAAGGTTCACTAGCAAATACGGTCAAGCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- TCATTAAA-TTTCATTGCATAAGGTTCACTAGCAAATACGGTCAAGCAAC
ET0067294      <-- TCATTAAA-TTTCATTGCATAAGGTTCACTAGCAAATACGGTCAAGCAAC
ET0127604      <-- TCATTAAA-TTTCATTGCATAAGGTTCACTAGCAAATACGGTCAAGCAAC
CT0131660      <-- ......................GGTTCACTAGCAAATACGGTCAAGCAAC
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> TCATTAAAATTTCATTGCATAAGGTTCACTAGCAAATACGGTCAAGCAAC
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               201    -    251
RU19839        --> AGATGAATAATCAGAATCCAAACCAGAAAGGTAGGATTTTTATAAGCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- AGATGAATAATCAGAATCCAAACCAGAAAGGTAGGAT.............
ET0067294      <-- AGATGAATAATCAGAATCCAAACCAGAAAGGTAGGATTTTTATAAGCTAC
ET0127604      <-- AGATGAATAATCAGAATCCAAACCAGAAAGGTAGGATTTTTATAAGCTAC
CT0131660      <-- AGATGAATAATCAGAATCCAAACCAGAAAGGTAGGATTTTTATAAGCTAC
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> AGATGAATAATCAGAATCCAAACCAGAAAGGTAGGATTTTTATAAGCTAC
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               251    -    301
RU19839        --> CTGAAAA-GGGGTCAAGCCTCCTGAAAAAATCTATTACCAACACTAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................  Control
ET0067294      <-- CTGAAAA-GGGGTCAAGCCTCCTGAAAAA-TCTATTACCA..........  Ethylene
ET0127604      <-- CTGAAAA-GGGGTCAAGCCTCCTGAAAAA-TCTATTACCAACACTAGATG  Ethylene
CT0131660      <-- CTGAAAA-GGGGTCAAGCCTCCTGAAAAAATCTATTACCAACACTAGATG  Control
CT0010452      <-- ..................................................  Control
CT0042314      <-- ..................................................  Control
CT0135303      --> CTGAAAAAGGGGTCAAGCCTCCTGAAAAAATCTATTACCAACACTAGATG  Control
CT0110461      --> ..................................................  Control
CT0110547      --> ..................................................  Control
CT0110936      --> ..................................................  Control
CT0110986      --> ..................................................  Control
CT0111131      --> ..................................................  Control
CT0111320      --> ..................................................  Control
CT0111806      --> ..................................................  Control
CT0112337      --> ..................................................  Control
CT0112801      --> ..................................................  Control
CT0112823      --> ..................................................  Control
CT0112829      --> ..................................................  Control
CT0112845      --> ..................................................  Control
CT0113269      --> ..................................................  Control
CT0113338      --> ..................................................  Control
CT0113850      --> ..................................................  Control
CT0113976      --> ..................................................  Control
CT0114170      --> ..................................................  Control
CT0114183      --> ..................................................  Control
CT0114503      --> ..................................................  Control
CT0114535      --> ..................................................  Control
CT0114703      --> ..................................................  Control
CT0115115      --> ..................................................  Control
CT0115300      --> ..................................................  Control
CT0117104      --> ..................................................  Control
CT0116183      --> ..................................................  Control
CT0127697      --> ..................................................  Control
ET0109444      --> ..................................................  Ethylene
ET0110285      --> ..................................................  Ethylene
ET0114647      --> ..................................................  Ethylene
ET0114834      --> ..................................................  Ethylene
ET0021652      --> ..................................................  Ethylene
RH47BP6        --> ..................................................  WaterDS

               301    -    351
RU19839        --> GCAGTTAGGACTGTCCTACTTTCAACCCTTGAACAATCACAGCTTCACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- GCAGTTAGGACTGTCC..................................
CT0131660      <-- GCAGTTAGGACTGTCCTACTTTCAACCCTTGAACAATCACAGCTTCACTC
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> GCAGTTAGGACTGTCCTACTT.............................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               351    -    401
RU19839        --> TCGACAAGGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- TCGACAAGGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0110547      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0110936      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0110986      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0111131      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0111320      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0111806      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0112337      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0112801      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0112823      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0112829      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0112845      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0113269      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0113338      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0113850      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0113976      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0114170      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0114183      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0114503      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0114535      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0114703      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0115115      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0115300      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0117104      --> .......GGCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0116183      --> ......ggtCTGCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
CT0127697      --> ...........GCTCAGCTTCCAGTGTTGTTTGATAGGTCCTCTATTATG
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               401    -    451
RU19839        --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0010452      <-- ............................................CTCTCC
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0110547      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0110936      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0110986      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0111131      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0111320      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0111806      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0112337      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0112801      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0112823      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0112829      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0112845      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0113269      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0113338      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0113850      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0113976      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0114170      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0114183      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0114503      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0114535      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0114703      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0115115      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0115300      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0117104      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0116183      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
CT0127697      --> CCCTTTCCATCCATAGCATCAAAGAAGAAGAAATTCTTGAGAGGCTCTCC
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               451    -    501
RU19839        --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................  Control
ET0067294      <-- ..................................................  Ethylene
ET0127604      <-- ..................................................  Ethylene
CT0131660      <-- TTTGCCT...........................................  Control
CT0010452      <-- TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0042314      <-- ..................................................  Control
CT0135303      --> ..................................................  Control
CT0110461      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0110547      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0110936      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0110986      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0111131      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0111320      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0111806      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0112337      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0112801      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AAAGAATTCCCCCAAT  Control
CT0112823      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0112829      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0112845      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0113269      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0113338      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0113850      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0113976      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0114170      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0114183      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0114503      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0114535      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCCCAA-GAATTCCCCCAAT  Control
CT0114703      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0115115      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0115300      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0117104      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0116183      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
CT0127697      --> TTTGCCTGATATTGCTTTGATAACCTCCTGCCC-AA-GAATTCCCCCAAT  Control
ET0109444      --> ..........................CCTGCTC-AA-GAATTCCCCCAAT  Ethylene
ET0110285      --> ..........................CCTGCTC-AA-GAATTCCCCCAAT  Ethylene
ET0114647      --> ..........................CCTGCTC-AA-GAATTCCCCCAAT  Ethylene
ET0114834      --> ..........................CCTGCTC-AA-GAATTCCCCCAAT  Ethylene
ET0021652      --> ..................................................  Ethylene
RH47BP6        --> ..................................................  WaterDS

               501    -    551
RU19839        --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTT-CTA
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0110547      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0110936      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0110986      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0111131      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0111320      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0111806      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0112337      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0112801      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0112823      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0112829      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0112845      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0113269      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0113338      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0113850      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0113976      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0114170      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0114183      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0114503      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0114535      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0114703      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0115115      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0115300      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0117104      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0116183      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
CT0127697      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
ET0109444      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
ET0110285      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
ET0114647      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
ET0114834      --> GATGGGACAAACTGGAGGAAATTCTCTTGGATCTGTCACCAATCTTTCTA
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               551    -    601
RU19839        --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTTCACAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTTCACAGAAC
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0110547      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0110936      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0110986      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0111131      --> GGAGGGCATCAGGAATATGAGATTCC........................
CT0111320      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0111806      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0112337      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0112801      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0112823      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0112829      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0112845      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0113269      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0113338      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0113850      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0113976      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0114170      --> GGAGGGCATCAGGAATATGAGATTCC........................
CT0114183      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0114503      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0114535      --> GGAGGGCATCAGGAATATGAGATTCttca.....................
CT0114703      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0115115      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0115300      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0117104      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0116183      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTT........
CT0127697      --> GGAGGGC...........................................
ET0109444      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTTCACAGAAC
ET0110285      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTTCACAGAAC
ET0114647      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTTCACAGAAC
ET0114834      --> GGAGGGCATCAGGAATATGAGATTCCTTCAACGACTGTGCTTCACAGAAC
ET0021652      --> ..................................................
RH47BP6        --> ..................................................

               601    -    651
RU19839        --> TCATTCTTCAATTTCAGAACACCGGGAAGATCTGCAATTGATACTTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- TCA...............................................
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> TCATTCTTCAATTTCAGAACACCGGGAAGATCTGCAATTGATACTTCT..
ET0110285      --> TCATTCTTCAATTTCAGAACACCGGGAAGATCTGCAATTGATACTTCT..
ET0114647      --> TCATTCTTCAATTTCAGAACACCGGGAAGATCTGCAATTGATACTTCT..
ET0114834      --> TCATTCTTCAATTTCAGAACACCGGGAAGATCTGCAATTGATACTTCT..
ET0021652      --> ...................CACCGGGAAGATCTGCAATTGATACTTCTCC
RH47BP6        --> ..................................................

               651    -    701
RU19839        --> AGGTTTACGTTGCTCAGCATCTTCAAACCTTTCTATCACTCGCATAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> AGGTTTACGTTGCTCAGCATCTTCAAACCTTTCTATCACTCGCATAGCAA
RH47BP6        --> ..................................................

               701    -    751
RU19839        --> AGTACAACTTTGACATTTTCCTGGGAAGTGCTTTCCAAGGTACTGAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> AGTACAACTTTGACATTTTCCTGGGAAGTGCTTTCCAAGGTACTGAAATT
RH47BP6        --> .........................................ACTGAAATT

               751    -    801
RU19839        --> GATTCCTCAAAACTTGGATAATTGTGTTGACATTCAATTGTTTCCTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> GATTCCTCAAAACTTGGATAATTGTGTTGACATTCAATTGTTTCCTCCAG
RH47BP6        --> GATTCCTCAAAACTTGGATAATTGTGTTGACATTCAATTGTTTCCTCCAG

               801    -    851
RU19839        --> TTTTTGCTTCGAATATTTATGGAGTTGCAGATCAACAAAAATTTCACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> TTTTTGCTTCGAATATTTAT..............................
RH47BP6        --> TTTTTGCTTCGAATATTTATGGAGTTGCAGATCAACAAAAATTTCACCAC

               851    -    901
RU19839        --> AAGAGTCTCTACAATCAACTGTGTAAAATGCTACCCGCTTGGATAACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> AAGAGTCTCTACAATCAACTGTGTAAAATGCTACCCGCTTGGATAACTTT

               901    -    951
RU19839        --> CGGCATTTTTCATTGATCAGCTTTTTTGTAGAGAGAGAGCAACAACTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> CGGCATTTTTCATTGATCAGCTTTTTTGTAGAGAGAGAGCAACAACTGAT

               951    -   1001
RU19839        --> AACCACAACATCAAACTTGCTATAGAACTCACCGCCAAAGTTTGGCGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ..................................................
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> AACCACAACATCAAACTTGCTATAGAACTCACCGCCAAAGTTTGACAAGT

               1001   -   1051
RU19839        --> CACCTTTCTCCACAGAAACACGAACCATCGGATTGAAATCTTTCAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- ...............................ATTGAAATCTTTCAGAGAA
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> CACCTTTCTCCACAGAAACACGAACCATCGGATTGAAATCTTTCAGAGAA

               1051   -   1101
RU19839        --> TCGCGACAAAGCTCGGTTAGAGTTTTCCCTCCATACACACTTTCATCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- TCGCGACAAAGCTCGGTTAGAGTTTTCCCTCCATACACACTTTCATCAGA
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> TCGCGACAAAGCTCGGTTAGAGTTTTCCCTCCATACACACTTTCATCAGA

               1101   -   1151
RU19839        --> AGGTATCAAAAAGTTAGCAGAAAGGGCTTCTTCGGTCGCTACCCGATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- ..................................................
ET0067294      <-- ..................................................
ET0127604      <-- ..................................................
CT0131660      <-- ..................................................
CT0010452      <-- ..................................................
CT0042314      <-- AGGTATCAAAAAGTTAGCAGAAAGGGCTTCTTCGGTCGCTACCCGATCAT
CT0135303      --> ..................................................
CT0110461      --> ..................................................
CT0110547      --> ..................................................
CT0110936      --> ..................................................
CT0110986      --> ..................................................
CT0111131      --> ..................................................
CT0111320      --> ..................................................
CT0111806      --> ..................................................
CT0112337      --> ..................................................
CT0112801      --> ..................................................
CT0112823      --> ..................................................
CT0112829      --> ..................................................
CT0112845      --> ..................................................
CT0113269      --> ..................................................
CT0113338      --> ..................................................
CT0113850      --> ..................................................
CT0113976      --> ..................................................
CT0114170      --> ..................................................
CT0114183      --> ..................................................
CT0114503      --> ..................................................
CT0114535      --> ..................................................
CT0114703      --> ..................................................
CT0115115      --> ..................................................
CT0115300      --> ..................................................
CT0117104      --> ..................................................
CT0116183      --> ..................................................
CT0127697      --> ..................................................
ET0109444      --> ..................................................
ET0110285      --> ..................................................
ET0114647      --> ..................................................
ET0114834      --> ..................................................
ET0021652      --> ..................................................
RH47BP6        --> AGGTATCAAAAAGTTAGCAGAAAGGGCTTCTTCGGTCGCTACCCGATCAT

               1151   -   1201
RU19839        --> CCACCAGTGTCAAACTACCAACTCCTGCTAGTACAATGTTCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0103480      <-- .............................................
ET0067294      <-- .............................................
ET0127604      <-- .............................................
CT0131660      <-- .............................................
CT0010452      <-- .............................................
CT0042314      <-- CCACCAGTGTCAAACTACCAACTCCTGCTAGTACAATGTTCTTGC
CT0135303      --> .............................................
CT0110461      --> .............................................
CT0110547      --> .............................................
CT0110936      --> .............................................
CT0110986      --> .............................................
CT0111131      --> .............................................
CT0111320      --> .............................................
CT0111806      --> .............................................
CT0112337      --> .............................................
CT0112801      --> .............................................
CT0112823      --> .............................................
CT0112829      --> .............................................
CT0112845      --> .............................................
CT0113269      --> .............................................
CT0113338      --> .............................................
CT0113850      --> .............................................
CT0113976      --> .............................................
CT0114170      --> .............................................
CT0114183      --> .............................................
CT0114503      --> .............................................
CT0114535      --> .............................................
CT0114703      --> .............................................
CT0115115      --> .............................................
CT0115300      --> .............................................
CT0117104      --> .............................................
CT0116183      --> .............................................
CT0127697      --> .............................................
ET0109444      --> .............................................
ET0110285      --> .............................................
ET0114647      --> .............................................
ET0114834      --> .............................................
ET0021652      --> .............................................
RH47BP6        --> CCACCAGTGTCAAACTACCAACTCCTACTAGT.............