SNPs of unigene RU22863
               1      -     51
RU22863        --> ACCAGTGACTATGATGTTGAAGGGGTTGATGATGAACAGAATGTTGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ACCAGTGACTATGATGTTGAAGGGGTTGATGATGAACAGAATGTTGAAGT
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> ACCAGTGACTATGATGTTGAAGGGGTTGATGATGAACAGAATGTTGAAGT
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               51     -    101
RU22863        --> TGAGGATTGCAAACCTCTTCTGAATCACTTCAATATGGGAAGTATTGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- TGAGGATTGCAAACCTCTTCTGAATCACTTCAATATGGGAAGTATTGGAC
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> TGAGGATTGCAAACCTCTTCTGAATCACTTCAATATGGGAAGTATTGGAC
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               101    -    151
RU22863        --> AAAGACCTCAGATTAAGGGAGAGCTTATTGAGACCAACTCGGATTTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- AAAGACCTCAGATTAAGGGAGAGCTTATTGAGACCAACTCGGATTTTGGT
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> AAAGACCTCAGATTAAGGGAGAGCTTATTGAGACCAGCTCGGATTTTGGT
CT0135002      --> ..................GAGAGCTTATTGAGACCAACTCGGATTTTGGT
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               151    -    201
RU22863        --> AAGAAGAGGAAGCAGCAGCAGGCTGAAGAGCCACAAATGATGCTTAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- AAGAAGAGGAAGCAGCAGCAGGCTGAAGAGCCACAAATGATGCTTAATCA
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> AAGAAGAGGAAGCAGCAGCAGGCTGAAGAGCCACAAAGGATGCTTACTCA
CT0135002      --> AAGAAGAGGAAGCAGCAGCAGGCTGAAGAGCCACAAATGATGCTTAATCA
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               201    -    251
RU22863        --> GAAGGTTTACACCTGTGAATTCCTGCAATGCCCATATAGTGATTTTCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- GAAGGTTTACACCTGTGAATTCCTGCAATGCCCATATAGTGATTTTCGCA
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> GAAGGTTTACACCTGTGAATTCCTGCAATGCCCATATAGTGATTATCGCA
CT0135002      --> GAAGGTTTACACCTGTGAATTCCTGCAATGCCCATATAGTGATTTTCGCA
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               251    -    301
RU22863        --> TTGGTGGCTTTTGTGACATTACTGCTAGAAACAATCATCAGATGAGTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- TTGGTGGCTTTTGTGACATTACTGCTAGAAACAATCATCAGATGAGTTGC
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> TTGGTGGCTTTTGTGACATTACTGCTAGAAACAATCATCAGATGAGTTGC
CT0135002      --> TTGGTGGCTTTTGTGACATTACTGCTAGAAACAATCATCAGATGAGTTGC
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               301    -    351
RU22863        --> CCATACAGGAATAATTTTTCACCAGTGTTTGCAATGCCAAACTTGCTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- CCATACAGGAATAATTTTTCACCAGTGTTTGCAATGCCAAACTTGCTTGA
CT0129309      <-- ..........................................TTGCTTGA
CT0133219      <-- ..........................................TTGCTTGA
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> CCATACAGGAATAATTTTTCACCAGTGTTTGCAATGCCAAACTTGCTTGA
CT0135002      --> CCATACAGGAATAATTTTTCACCAGTGTTTGCAATGCCAAACTTGCTTGA
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               351    -    401
RU22863        --> CAATGACAAACCTGCAGGCTTCCCTCTACCAGTTGCTCAAGCTAA-GCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- CAATGACAAACCTGCAGGCTTCCCTCTACCAGTTGCTCAAGCTAA-GCCA
CT0129309      <-- CAATGACAAACCTGCAGGCTTCCCTCTACCAGTTGCTCAAGCTAA-GCCA
CT0133219      <-- CAATGACAAACCTGCAGGCTTCCCTCTACCAGTTGCTCAAGCTAA-GCCA
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> CAATGACAAACCTGCAGGCTTCCCTCTACCAGTTGCTCAAGCGAA-GCCA
CT0135002      --> CAATGACAAACCTGCAGGCTTCCCTCTACCAGTTGCTCAAGCTAA-GCCA
CT0138177      --> ...........taGCAGGCTTCCCTCTACCAGTTGCTCAAGCTAAAGCCA
CT0137531      --> ..........ttgaCAGGCTTCCCTCTACCAGTTGCTCAAGCTAA-GCCA
CT0133678      --> .........................CTACCAGTTGCTCAAGCTAA-GCCA
CT0135126      --> .........................CTACCAGTTGCTCAAGCTAA-GCCA
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               401    -    451
RU22863        --> GCAGTTATACAACAGGTGAACCAGACAAGCCCTT-ACAATGTTTCAGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- GCAGTTATACAACAGGTGAACCAGACAAGCCCTT-ACAATGTTTCAGGAC
CT0129309      <-- GCAGTTATACAACAGGTGAACCAGACAAGCCCTT-ACAATGTTTCAGGAC
CT0133219      <-- GCAGTTATACAACAGGTGAACCAGACAAGCCCTT-ACAATGTTTCAGGAC
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> GCAGTTATACAACAGGTGAACCAGACAAGCCCTT-ACAATGTTTCAGGAC
CT0135002      --> GCAGTT............................................
CT0138177      --> GCAGTCATACAACAGGTGAACCAGACAAGCCATT-ACAATGTTTCAGGAC
CT0137531      --> GCAGTCATACAACAGGTGAACCAGACAAGCCATT-ACAATGTTTCAGGAC
CT0133678      --> GCAGTCATACAACAGGTGAACCAGACAAGCCATT-ACAATGTTTCAGGAC
CT0135126      --> GCAGTCATACAACAGGTGAACCAGACAAGCCATT-ACAATGTTTCAGGAC
ET0112829      --> ...........................AGCCCTTTACAATGTTTCAGGAC
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               451    -    501
RU22863        --> TCGGACTTGCAGATGATGGGCAGAAAATGATATCCGAGCTTATGTCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- TCGGACTTGCAGATGATGGGCAGAAAATGATATCCGAGCTTATGTCATCC
CT0129309      <-- TCGGACTTGCAGATGA..................................
CT0133219      <-- TCGGACTTGCAGATGA..................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> TTGGACTTGCAGATGATGGGCAGAAAATGATATCCGAGCTTATGTCATCC
CT0135002      --> ..................................................
CT0138177      --> TCGGACTTGCAGATGATGGGCAGAAAATGATATCCGAGCTTATGTCATCC
CT0137531      --> TCGGACTTGCAGATGATGGGCAGAAAATGATATCCGAGCTTATGTCATCC
CT0133678      --> TCGGACTTGCAGATGATGGGCAGAAAATGATATCCGAGCTTATGTCATCC
CT0135126      --> TCGGACTTGCAGATGATGGGCAGAAAATGATATCCGAGCTTATGTCATCC
ET0112829      --> TTGGACTTGCAGATGATGGGCAGAAAATGATATCCGAGCTTATGTCATCC
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               501    -    551
RU22863        --> TATGATAGCAATACTCAGCACAGCCCGAATCCTGGCAACCTCAATGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- TATGATAGCAATACTCAGCACAGCCCGAATCCTGGCAACCTCAATGTTGT
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ...................................CAACCTCAATGCTGT
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> TATGATAGCAATACTCAGCACAGCCCGAATCCTGGCAACCTCAATGCTGT
CT0135002      --> ..................................................
CT0138177      --> TATGATACCAATACTCAGCACAGCCCGAATCCTGGCAACCTCAATGCTGT
CT0137531      --> TATGATACCAATACTCAGCACAGCCCGAATCCTGGCAACCTCAATGCTGT
CT0133678      --> TATGATACCAATACTCAGCACAGCCCGAATCCTGGCAACCTCAATGCTGT
CT0135126      --> TATGATACCAATACTCAGCACAGCCCGAATCCTGGCAACCTCAATGCTGT
ET0112829      --> TATGATAGCAATACTCAGCACAGCCCGAATCCTGGCAACCTCAATGCTGT
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               551    -    601
RU22863        --> ACAAGACCACAACCACC-AGCAGGCAAAATTTCAGTATCCAGTGAATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ACAAGACCACAACCACC-AGCAGGCAAAATTTCAGTATCCAGTGAATGAT
RH13J49        <-- ACAAGACCACAACCACC-AGCAGGCAAAATTTCAGTATCCAGTGAATGAT
RH43BL101      <-- ACAAGACCACAACCACC-AGCAGGCAAAATTTCAGTATCCAGTGAATGAT
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ACAAGACCACAACCACC-AGCAGGCAAAATTTCAGTATCCAGTGAATGAT
CT0137531      --> ACAAGACCACAACCACCTAGCAGGCAAAATTTCAGTATCCAGTGAATGAT
CT0133678      --> ACAAGACCACAACCACC-AGCAGGCAAAATTTCAGTATCCAGTGAATGAT
CT0135126      --> ACAAGACCACAACCACC-AGCAGGCAAAATTTCAGTATCCAGTGAATGAT
ET0112829      --> ACAAGACCACAACCACC-AGCAGGCAAAATTTCAGTATCCAGTGAATGAT
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               601    -    651
RU22863        --> AACTTCTATGGTCAAGGG-ATGGTTATGGATCGTAACAATGTGCCTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................  WaterDS
CT0129309      <-- ..................................................  Control
CT0133219      <-- ..................................................  Control
ET0026642      <-- AACTTCTATGGTCAAGGG-ATGGTTATGGATCGTAACAATGTGCCTGAAC  Ethylene
RH13J49        <-- AACTTCTATGGTCAAGGG-ATGGTTATGGCTCGTAACAATGTGCCTGAAC  WaterDS
RH43BL101      <-- AACTTCTATGGTCAAGGG-ATGGTTATGGCTCGTAACAATGTGCCTGAAC  WaterDS
CT0089780      <-- ..................................................  Control
ET0143278      <-- ..................................................  Ethylene
RH45BR83       --> ..................................................  WaterDS
CT0135002      --> ..................................................  Control
CT0138177      --> AACTTCTATGGTCAAGGGGATGGTTATGGATCGTAACAATG.........  Control
CT0137531      --> AACTTCTATGGTCAAGGG-ATGGTTATGGATCGTAAC.............  Control
CT0133678      --> AACTTCTATGGTCAAGGG-ATGGTTATGGATCGTAACAATGTG.......  Control
CT0135126      --> AACTTCTATGGTCAAGGG-ATGGTTATGGATCGTAACAATGTG.......  Control
ET0112829      --> AACTTCTATGGTCAAGGG-ATGGTTATGGATCGTAACAATGTGCCTGAAC  Ethylene
ET0105785      --> ...............GGG-ATGGTTATGGATCGTAACAATGTGCCTGAAC  Ethylene
CT0131095      --> ..................................................  Control
CT0131264      --> ..................................................  Control

               651    -    701
RU22863        --> CAACACCGATGCCCATGCTTCAACAAGTTTTCCCGTCGCCTGAAGTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- CAACACCGATGCCCATGCTTCAACAAG.......................
RH13J49        <-- CAACACCGATGCCCATGCTTCAACAAGTTTTCCCGTCGCCTGAAGTTCAG
RH43BL101      <-- CAACACCGATGCCCATGCTTCAACAAGTTTTCCCGTCGCCTGAAGTTCAG
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> CAA...............................................
ET0105785      --> CAACACCGATACCCATGCTTCAACAAGTTTTCCCATCGCCTGAAGTTCAG
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               701    -    751
RU22863        --> TTTGATCAGTGCAAGGTATTTGATTCTGCCTTTGGTAACAATCCGAATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- TTTGATCAGTGCAAGGTATTTGATTCTGCCTTTGGTAACAATCCGAATGA
RH43BL101      <-- TTTGATCAGTGCAAGGTATTTGATTCTGCCTTTGGTAACAATCCGAATGA
CT0089780      <-- ..................................................
ET0143278      <-- ..................................................
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> TTTGATCAGTGCAAGGTATTTGATTCTGCCTTTGGTAACAATCCGAATGA
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               751    -    801
RU22863        --> TGTTATTCCTGACTTGAGATTTGGATCTGGATCTCAGTTTAGCTTGGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- TGTTATTCCTGACTTGAGATTTGGATCTGGATCTCAGTTTAGCTTGGCAT
RH43BL101      <-- TGTTATTCCTGACTTGAGATTTGGATCTGGATCTCAGTTTAGCTTGGCAT
CT0089780      <-- ..cTATTCCTGACTTGAGATATGTATCTGGATCTCAGTTTAGCTTGGCAT
ET0143278      <-- ..................................................
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> TGTTATTCCTGACTTGAGATTTGGATCTGGATCTCAGTTTAGCTTGGCAT
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               801    -    851
RU22863        --> CGCCGGATTATAATGTTGGTAACTCACTGCTGAAGCAAGATGCTGCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- CGCCGGATTATAATGTTGGTAACTCACTGC....................
RH43BL101      <-- CGCCGGATTATAATGTTGGTAACTCACTGC....................
CT0089780      <-- CGCCGGACTATAATGTTGGTAACTCACTGCTGAAGCAAGATGCTGCATCA
ET0143278      <-- ..................................................
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> CGCCGGACTATAATGTTGGTAACTCACTGCTGAAGCAAGATG........
CT0131095      --> ....GGATTATAATGTTGGTAACTCACTGCTGAAGCAAGATGCTGCATCA
CT0131264      --> ....GGATTATAATGTTGGTAACTCACTGCTGAAGCAAGATGCTGCATCA

               851    -    901
RU22863        --> TCGTTTTGGTACATCTGAACAAGTTT-ATGTCGGCTTCTCCAATATATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- TCGTTTTGGTACATCTGAACAAGTTTTATGTCGGCTTCTCCAATATATGG
ET0143278      <-- ..................................................
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> TCGTTTTGGTACATCTGAACAAGTTT-ATGTCGGCTTCTCCAATATATGG
CT0131264      --> TCGTTTTGGTACATCTGAACAAGTTT-ATGTCGGCTTCTCCAATATATGG

               901    -    951
RU22863        --> ATGAGTCTGTATATTATGGGGGGAAACGGTTCATCTTCTATACACAGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ATGAGTCTGTATATTATGGGGGGAAACGGTTCATCTTCTATACACAGTA.
ET0143278      <-- ..................................................
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ATGAGTCTGTATATTATGGGGGGAAACGGTTCATCTTCTATACACAGTAT
CT0131264      --> ATGAGTCTGTATATTATGGGGGGAAACGGTTCATCTTCTATACACAGTAT

               951    -   1001
RU22863        --> TTCTTTATCTTTCTGTTAAGGTTTTAGTTACTTAGTTGTTATATAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- .................AAGGTTTTAGTTACTTAGTTGTTATATAGTTGT
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> TTCTTTATCTTTCTGTTAAGGTTTTAGTTACTTAGTTGTTATATAGTTGT
CT0131264      --> TTCTTTATCTTTCTGTTAAGGTTTTAGTTACTTAGTTGTTATATAGTTGT

               1001   -   1051
RU22863        --> ATATGTCCCCGGACTTGTTAGATCCTAAGAAATTGGGGGGTGTGTCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ATATGTCCCCGGACTTGTTAGATCCTAAGAAATTGGGGGGTGTGTCACAG
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ATATGTCCCCGGACTTGTTAGATCCTAAGAAATTGGGGGGTGTGTCACAG
CT0131264      --> ATATGTCCCCGGACTTGTTAGATCCTAAGAAATTGGGGGGTGTGTCACAG

               1051   -   1101
RU22863        --> CAAGTTTATTGTTCAAGTATAGTTGGTTAAGTAGGCCAATAAAAA-GGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- CAAGTTTATTGTTCAAGTATAGTTGGTTAAGTAGGCCAATAAAAAAGGAC
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> CAAGTTTATTGTTCAAGTATAGTTGGTTAAGTAGGCCAATAAAAA-GG-C
CT0131264      --> CAAGTTTATTGTTCAAGTATAGTTGGTTAAGTAGGCCAATAAAAA-GGAC

               1101   -   1151
RU22863        --> CGGAAAA-TCCCAACCTAGCTGATTGGCAATCAGTGCTTTTGTTAGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- CGGAAAAATCCCAACCTAGCTGATTGGCAATCAGTGCTTTTGTTAGAGGC
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> CGGAAAA-TCCCAACCTAGCTGATTGGCAATCAGTGt.............
CT0131264      --> CGGAAAA-TCCCAACCTAGCTGATTGGCAATCAGTGt.............

               1151   -   1201
RU22863        --> ATTTTCCGGTTCCCAAGGTCAATATTGGCAACCAAGTATTATGATTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ..................................................
CT0129309      <-- ..................................................
CT0133219      <-- ..................................................
ET0026642      <-- ..................................................
RH13J49        <-- ..................................................
RH43BL101      <-- ..................................................
CT0089780      <-- ..................................................
ET0143278      <-- ATTTTCCGGTTCCCAAGGTCAATATTGGCAACCAAGTATTATGATTTGTT
RH45BR83       --> ..................................................
CT0135002      --> ..................................................
CT0138177      --> ..................................................
CT0137531      --> ..................................................
CT0133678      --> ..................................................
CT0135126      --> ..................................................
ET0112829      --> ..................................................
ET0105785      --> ..................................................
CT0131095      --> ..................................................
CT0131264      --> ..................................................

               1201   -   1251
RU22863        --> TATGTTTATTTTATATACACAGACATTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH14K152       <-- ...............................
CT0129309      <-- ...............................
CT0133219      <-- ...............................
ET0026642      <-- ...............................
RH13J49        <-- ...............................
RH43BL101      <-- ...............................
CT0089780      <-- ...............................
ET0143278      <-- TATGTTTATTTTATATACACAGACATTTTAA
RH45BR83       --> ...............................
CT0135002      --> ...............................
CT0138177      --> ...............................
CT0137531      --> ...............................
CT0133678      --> ...............................
CT0135126      --> ...............................
ET0112829      --> ...............................
ET0105785      --> ...............................
CT0131095      --> ...............................
CT0131264      --> ...............................