SNPs of unigene RU22917
               1      -     51
RU22917        --> GCTTCTCTCTCTCTTCTCTTTCTCAATTTTTGGTTCCTTTTACAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> GCTTCTCTCTCTCTTCTCTTTCTCAATTTTTGGTTCCTTTTACAAAAAAA
CT0017368      --> ..................................................
RH06C120       --> ..................................................
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               51     -    101
RU22917        --> AAAACTCAAAGGAGAACTTTGATCGCGAACCCTAGAAACTACCAGAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> AAAACTCAAAGGAGAACTTTGATCGCGAACCCTAGAAACTACCAGAAGCA
CT0017368      --> ..................................................
RH06C120       --> ..................................................
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               101    -    151
RU22917        --> GAGACAGAAGCACCGGTTTGCCGATCCGGAATGACGCAATAGCCCCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> GAGACAGAAGCACCGGTTTGCCGATCCGGAATGACGCAATAGCCCCCTTC
CT0017368      --> ..................................................
RH06C120       --> ..................................................
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               151    -    201
RU22917        --> CACAACTCTCGTATCCGTTGGAGCTTTTGTTAAAAGAGTGTCCTGATTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> CACAACTCTCGTATCCGTTGGAGCTTTTGTTAAAAGAGTGTCCTGGTTCG
CT0017368      --> ..................TGGAGCTTTTGTTAAAAGAGTGTCCTGATTCG
RH06C120       --> ........................TTTTGTTAAAAGAGTGTCCTGATTCG
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               201    -    251
RU22917        --> TGACTCTGATTAAATTGTCATCATGGTCGCCACTGCTGCTACTTCATCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> TGACTCTGATTAAATTGTCATCATGGTCGCCACTGCTGCTACTTCATCGT
CT0017368      --> TGACTCTGATTAAATTGTCATCATGGTCGCCACTGCTGCTACTTCATCGT
RH06C120       --> TGACTCTGATTAAATTGTCATCATGGTCGCCACTGCTGCTACTTCATCGT
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               251    -    301
RU22917        --> TCTTTCCGGTTCCTTCTCCCGACTCTGGTGCTAAGAATTCCAAGCTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- .............................................TTGGA
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> TCTTTCCGGTTCCTTCTCCCG.............................
CT0017368      --> TCTTTCCGGTTCCTTCTCCCGACTCTGGTGCTAAGAATTCCAAGCTTGGA
RH06C120       --> TCTTTCCGGTTCCTTCTCCCGACTCTGGTGCTAAGAATTCCAAGCTTGGA
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               301    -    351
RU22917        --> AATGGGAATGCCAAGTTAGGACTCAAATCAAAATCTGCTGCGGCTGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- AATGGGAATGCCAAGTTAGGACTCAAATCAAAATCTGCTGCGGCTGGTTT
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> AATGGGAATGCCAAGTTAGGACTCAAATCAAAATCTGCTGCGGCTGGTTT
RH06C120       --> AATGGGAATGCCAAGTTAGGACTCAAATCAAAATCTGCTGCGGCTGGTTT
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               351    -    401
RU22917        --> GCAGGTAAAGGCCAATGCTCAAGCACCTCCAAAAATAAA-TGGCACTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- GCAGGTAAAGGCCAATGCTCAAGCACCTCCAAAAATAAAATGGCACTAGC
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> GCAGGTAAAGGCCAATGCTCAAGCACCTCCAAAAATAAA-TGGCACTAGC
RH06C120       --> GCAGGTAAAGGCCAATGCTCAAGCACCTCCAAAAATAAA-TGGCACTAGC
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               401    -    451
RU22917        --> GTTGGTTTGGCCACTGTCGAAAGTGGAAAGAATGGGGATGACATGCACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- GTTGGTTTGGCCACTGTCGAAAGTGGAAAGAATGGGGATGACATGCACGG
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> GTTGGTTTGGCCA.....................................
RH06C120       --> GTTGGTTTGGCCACTGTCGAAAGTGGAAAGAATGGGGATGACATGCACGG
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               451    -    501
RU22917        --> ACTTGCTCAGTCCCCTCCTGCACGGACTTTCATTAACCAATTACCTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ACTTGCTCAGTCCCCTCCTGCACGGACTTTCATTAACCAATTACCTGATT
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> ACTTGCTCAGTCCCCTCCTGCACGGACTTTCATTAACCAATTACCCGATT
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               501    -    551
RU22917        --> GGAGTATGCTTCTTGCTGCTATAACCACAATCTTCTTGGCAGCAGAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- GGAGTATGCTTCTTGCTGCTATAACCACAATCTTCT..............
ET0000574      <-- ........CTTCTTGCTGCTATAACCACAATCTTCTTGGCAGCAGAAAAG
CT0005381      <-- ........................CCACAATCTTCTTGGCAGCAGAAAAG
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> GGAGTATGCTTCTTGCTGCTATAACCACAATCTTCTTGGCAGCAGAAAAG
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               551    -    601
RU22917        --> CAATGGATGATGCTTGATTGGAAACCCAAGCGACCTGATATGCTAATTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- CAATGGATGATGCTTGATTGGAAACCCAAGCGACCTGATATGCTAATTGA
CT0005381      <-- CAATGGATGATGCTTGATTGGAAACCCAAGCGGCCTGATATGCTAATTGA
ET0001624      <-- ...........................AAGCGACCTGATATGCTAATTGA
ET0002278      <-- ...........................AAGCGACCTGATATGCTAATTGA
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> CAATGGATGATGCTTGATTGGAAACCCAAGCGACCTGATATGCTAATTGA
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               601    -    651
RU22917        --> CCCTTTTGGTTTGGGAAGAATTGTTCAGGATGGTCTTGTATTCCGCCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- CCCTTTTGGTTTGGGAAGAATTGTTCAGGATGGTCTTGTATTCCGCCAGA
CT0005381      <-- CCCTTTTGGTTTGGGAAGAATTGTTCAGGATGGCCTTGTATTCCGCCAGA
ET0001624      <-- CCCTTTTGGTTTGGGAAGAATTGTTCAGGATGGTCTTGTATTCCGCCAGA
ET0002278      <-- CCCTTTTGGTTTGGGAAGAATTGTTCAGGATGGTCTTGTATTCCGCCAGA
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> CCCTTTTGGTTTGGGAAGAATTGTTCAGGATGGTCTTGTATTCCGCCAGA
ET0123759      --> CCCTTTTGGTTTGGGAAGAATTGTTCAGGATGGTCTTGTATTCCGCCAGA
ET0116841      --> .................GAATTGTTCAGGATGGCCTTGTATTCCGCCAGA
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               651    -    701
RU22917        --> ACTTCTCCATTAGATCGTATGAAATAGGTGCTGATCGAACGGCTTCAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ACTTCTCCATTAGATCGTATGAAATAGGTGCTGATCGAACGGCTTCAATA
CT0005381      <-- ACTTCTCCATTAGATCGTATGAAATAGGTGCTGATCGAACGGCTTC....
ET0001624      <-- ACTTCTCCATTAGATCGTATGAAATAGGTGCTGATCGAACGGCTTCAATA
ET0002278      <-- ACTTCTCCATTAGATCGTATGAAATAGGTGCTGATCGAACGGCTTCAATA
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> ACTTCTCCATTAGATCGTATGAAATAGGTGCTGATCGAACGGCTTCAATA
ET0123759      --> ACTTCTCCATTAGATCGTATGAAATAGGTGCTGATCGAACGGCTTCAATA
ET0116841      --> ACTTCTCCATTAGATCGTATGAAATAGGTGCTGATCGAACGGCTTCAATA
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               701    -    751
RU22917        --> GAGACGTTAATGAATCATTTACAGGAAACAGCGCTTAATCATGTT-AAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................  Ethylene
ET0000574      <-- GAGACGTTAATGAATCATTTACAGGAAACAGCGCTTAATCATGTT.....  Ethylene
CT0005381      <-- ..................................................  Control
ET0001624      <-- GAGACGTTAATGAATCATTTACAGGAAACAGCGCTTAATCATGTT-AAGA  Ethylene
ET0002278      <-- GAGACGTTAATGAATCATTTACAGGAAACAGCGCTTAATCATGTT-AAGA  Ethylene
CT0016127      <-- ..................................................  Control
CT0073729      <-- ..................................................  Control
ET0116036      --> ..................................................  Ethylene
CT0017368      --> ..................................................  Control
RH06C120       --> GAGACGTTAATGAATCATTTACAGGAAACAGCGCTTAATCATGTT-AAGA  WaterDS
ET0123759      --> GAGACGTTAATGAATCATTTACAGGAAACAGCGCTTAATCATGTT-AAGA  Ethylene
ET0116841      --> GAGACGTTAATGAATCATTTACAGGAAACAGCGCTTAATCATGTT-AAGA  Ethylene
CT0128248      --> ..................................TTAATCATGTTTAAGA  Control
CT0130315      --> ..................................TTAATCATGTTTAAGA  Control
ET0057722      --> ..................................................  Ethylene
CT0064633      --> ..................................................  Control
CT0044303      --> ..................................................  Control

               751    -    801
RU22917        --> CTGCTGGCCTCTTAGGGGACGGCTTTGGTTCAACTCCAGAGATGTCCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- CTGCTGGCCTCTTAGGGGACGGCTTTGGTTCAACTCCAGAGATGTCCATA
ET0002278      <-- CTGCTGGCCTCTTAGGGGACGGCTTTGGTTCAACTCCAGAGATGTCCATA
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> CTGCTGGCCTCTTAGGGGACGGCTTTGGTTCAACTCCAGAGATGTCCATA
ET0123759      --> CTGCTGGCCTCTTAGGGGACGGCTTTGGTTCAACTCCAGAGATGTCCATA
ET0116841      --> CTGCTGGCCTCTTAGGGGACGGATTTGGTTCAACTCCAGAGATGTCCATA
CT0128248      --> CTGCTGGCCTCTTAGGGGACGGATTTGGTTCAACTCCAGAGATGTCCATA
CT0130315      --> CTGCTGGCCTCTTAGGGGACGGATTTGGTTCAACTCCAGAGATGTCCATA
ET0057722      --> ....................................CAGAGATGTCCATA
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               801    -    851
RU22917        --> AGGAACCTTATATGGGTGGTAACCAAAATGCAGGTTAAGGTAGACCGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- AGGAACCTTATATGGGTGGTAACCAAAATG....................
ET0002278      <-- AGGAACCTTATATGGGTGGTAACCAAAATG....................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> AGGAACCTTATATGGGTGGTAACCAAAATGCAGGTTAAGGTACACCGCTA
ET0123759      --> AGGAACCTTATATGGGTGGTAACCAAAATGCAGGTTAAGGTAGACCGCTA
ET0116841      --> AGGAACCTTATATGGGTGGTAACCAAAATGCAGGTTAAGGTAGACCGCTA
CT0128248      --> AGGAACCTTATATGGGTGGTAACCAAAATGCAGGTTAAGGTAGACCGCTA
CT0130315      --> AGGAACCTTATATGGGTGGTAACCAAAATGCAGGTTAAGGTAGACCGCTA
ET0057722      --> AGGAACCTTATATGGGTGGTAACCAAAATGCAGGTTAAGGTAGACCGCTA
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               851    -    901
RU22917        --> TCCTACTTGGGGT-GATGTTGTTCAAGTTG-ACACTTGGGTTAGTGCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................TTGTTCAAGTTG-ACACTTGGGTTAGTGCCTC
CT0073729      <-- ...................TGTTCAAGTTG-ACACTTGGGTTAGTGC-TC
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> TCCTACTTGGGGT-GATGTTGTTCAAGTTG-ACACTTGGGTTAATGCCTC
ET0123759      --> TCCTACTTGGGGT-G...................................
ET0116841      --> TCCTACTTGGGGT-G...................................
CT0128248      --> TCCTACTTGGGGTTGATGTTGTTCAAGTTGTACACTTGGGTTAGTGCCTC
CT0130315      --> TCCTACTTGGGGT-GATGTTGTTCAAGTTGTACACTTGGGTTAGTGCCTC
ET0057722      --> TCCTACTTGGGGT-GATGTTGTTCAAGTTG-ACACTTGGGTTAGTGCCTC
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               901    -    951
RU22917        --> CGGGAAGAATGGTATGCGGCGT-GATTGGATTATCCATGATTGCAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- CGGGAAGAATGGTATGCGGCGT-GATTGGATTATCCATGATTGCAAAACA
CT0073729      <-- CGGGAAGAATGGTATGCGGCGT-GATTGGATTATCCATGATTGCAAAACA
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> CGGGAAGAATGGTATGCCGCGT-GATTGGATTATTCATGATTGCAAAACA
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> CGGGAAGAATGGTATGCGGCGTTGATTGGATTATCCATGATTGCAAAACA
CT0130315      --> CGGGAAGAATGGTATGCGGCGT-GATTGGATTATCCATGATTGCAAAACA
ET0057722      --> CGGGAAGAATGCTATGCGGCGT-GATTGGATTATCCATGATTGCAAAACA
CT0064633      --> ..................................................
CT0044303      --> ..................................................

               951    -   1001
RU22917        --> GGACAAATTTTAACAAGAGCCTCCAGTGTGTGGGTGATGATGAATAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- GGACAAATTTTAACAAGAGCCTCCAGTGTGTGGGTGATGATGAATAAACT
CT0073729      <-- GGACAAATTTTAACAAGAGCCTCCAGTGTGTGGGTGATGATGAATAAACT
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> GGACAAAT..........................................
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> G.................................................
CT0130315      --> GGACAAATTTTAACAAGAGCCTCCAGTGTGTGGGTGATGATGAATAAACT
ET0057722      --> GGACAAtacatg......................................
CT0064633      --> ........................................TGAATAAACT
CT0044303      --> ..................................................

               1001   -   1051
RU22917        --> GACTAGGAGGTTATCCAAAATACCCGATGAGGTTCGGAGTGAAATAGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- GACTAGGA..........................................
CT0073729      <-- GACTAGGAGGTTATCCAAAATACCCGATGAGGTTCGGAGTGAAATAGAGC
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> ..................................................
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> GACTAGGAGGTTATCC..................................
ET0057722      --> ..................................................
CT0064633      --> GACTAGGAGGTTATCCAAAATACCCGATGAGGTTCGGAGTGAAATAGAGC
CT0044303      --> ..................................................

               1051   -   1101
RU22917        --> CTTACTTTATGAATTCTGCTCCTGTTGTGGAGGAGGATGGCAGGAAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- CTTACTTTATGAATTCTGCTCCTGTTGTGGAGGAGGATGGCAGGAAACTG
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> ..................................................
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> CTTACTTTATGAATTCTGCTCCTGTTGTGGAGGAGGATGGCAGGAAACTG
CT0044303      --> .............TTCTGCTCCTGTTGTGGAGGAGGATGGCAGGAAACTG

               1101   -   1151
RU22917        --> CAGAAACTTGACGACAATACTGCGGACTTTGTCCGTACTGGTTTAACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- CAGAAACTTGACGACA..................................
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> ..................................................
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> CAGAAACTTGATGACAATACTGCGGACTTTGTCCATACTGGTTTAACTCC
CT0044303      --> CAGAAACTTGACGACAATACTGCGGACTTTGTCCGTACTGGTTTAACTCC

               1151   -   1201
RU22917        --> TAGGTGGAGTGATCTGGATATCAACCAGCATGTTAACAATGTGAAGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- ..................................................
ET0000574      <-- ..................................................
CT0005381      <-- ..................................................
ET0001624      <-- ..................................................
ET0002278      <-- ..................................................
CT0016127      <-- ..................................................
CT0073729      <-- ..................................................
ET0116036      --> ..................................................
CT0017368      --> ..................................................
RH06C120       --> ..................................................
ET0123759      --> ..................................................
ET0116841      --> ..................................................
CT0128248      --> ..................................................
CT0130315      --> ..................................................
ET0057722      --> ..................................................
CT0064633      --> TAGGTGGAGTGATCTGGATATCAACCAGCATGTTAACAATGTGAAGTACA
CT0044303      --> TAGGTGGAGTGATCTGGATATCAACCAGCATGTTAACAATGTGAAGTACA

               1201   -   1251
RU22917        --> TTGGCTGGATCCTTGAGAGTGCTCCCTTGCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
ET0118654      <-- .................................
ET0000574      <-- .................................
CT0005381      <-- .................................
ET0001624      <-- .................................
ET0002278      <-- .................................
CT0016127      <-- .................................
CT0073729      <-- .................................
ET0116036      --> .................................
CT0017368      --> .................................
RH06C120       --> .................................
ET0123759      --> .................................
ET0116841      --> .................................
CT0128248      --> .................................
CT0130315      --> .................................
ET0057722      --> .................................
CT0064633      --> TTGGCTGGATC......................
CT0044303      --> TTGGCTGGATCCTTGAGAGTGCTCCCTTGCCAA