SNPs of unigene RU22949
               1      -     51
RU22949        --> ACACCACAGAATCCAAGCTTTGGAAATTCTGTATTTTGTAACAGCCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ACACCACAGAATCCAAGCTTTGGAAATTCTGTATTTTGTAACAGCCAACA
RH13J90        <-- ACACCACAGAATCCAAGCTTTGGAAATTCTGTATTTTGTAACAGCCAACA
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ............................................CCAACA
CT0131909      --> ............................................CCAACA
CT0132309      --> ............................................CCAACA
CT0132704      --> ............................................CCAACA
CT0133099      --> ............................................CCAACA
CT0135965      --> ............................................CCAACA
CT0136692      --> ............................................CCAACA
CT0138904      --> ............................................CCAACA
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               51     -    101
RU22949        --> CATTTTT-AG-TCACCTTACGGAAAATAAT-GAGAGCTTCCACC-AACC-
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- CATTTTT-AG-TCACCTTACGGAAAATAAT-GAGAGCTTCCACC-AACC-
RH13J90        <-- CATTTTT-AG-TCACCTTACGGAAAATAAT-GAGAGCTTCCACC-AACC-
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> CATTTTTTAG-TCACCTTACGGAAAATAAT-GAGAGCTTCCACC-AACC.
CT0131909      --> CATTTTT-AG-TCACCTTACGGAAAATAAT-GAGAGCTTCCACC-AACC-
CT0132309      --> CATTTTTTAG-TCACCTTACGGAAAATAAT-GAGAGCTTCCACC-AACCC
CT0132704      --> CATTTTT-AG-TCACCTTACGGAAAATAAT-GAGAGCTTCCACC-AACC-
CT0133099      --> CATTTTT-AG-TCACCTTACGGAAAATAAT-GAGAGCTTCCACC-AACC.
CT0135965      --> CATTTTTTAGTTCACCTTACGGAAAATAAT-GAGAGCTTCCACC-AACC-
CT0136692      --> CATTTTTTAG-TCACCTTACGGAAAATAAT-GAGAGCTTCCACCCAACC-
CT0138904      --> CATTTTT-AG-TCACCTTACGGAAAATAATAGAGAGCTTCCACC-AA...
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               101    -    151
RU22949        --> AAGGAACTGATTCAATGTCTCCACAGCTGCATCACCACAATCTTCCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- AAGGAACTGATTCAATGTCTCCACAGCTGCATCACCACAATCTTCCTAAA
RH13J90        <-- AAGGAACTGATTCAATGTCTCCACAGCTGCATCACCACAATCTTCCTAAA
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> AAGGAACTGATTCAATGTCTCCACAGCTGCATCACCACAATCTTCCTAAA
CT0132309      --> AAGGAACTGATTCAATGTCTCCACAGCTGCATCACCACAATCTTCCTAAA
CT0132704      --> AAGGAACTGATTCAATGTCTCCACAGCTGCATCACCACAATCTTCCTAAA
CT0133099      --> ..................................................
CT0135965      --> AAGGAACTGATTCAATGTCTCCACAGCTGCATCACCACAATCTTCCTAAA
CT0136692      --> AAGGAACTGATTCAATGTCTCCACAGCTGCATCACCACAATCTTCCTAAA
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               151    -    201
RU22949        --> TCACCACACACCTTGTAATTCACTTGGCCGAAGACATGCGCTGCAGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- TCACCACACACCTTGTAATTCACTTGGCCGAAGACATGCGCTGCAGTGAT
RH13J90        <-- TCACCACACACCTTGTAATTCACTTGGCCGAAGACATGCGCTGCAGTGAT
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> TCACCACACACCTTGTAATTCACTTGGCCGAAGACATGCGCTGCAGTGAT
CT0132309      --> TCACCACACACCTTGTAATTCACTTGGCCGAAGACATGCGCTGCAGTGAT
CT0132704      --> TCACCACACACCTTGTAATTCACTTGGCCGAAGACATGCGCTGCAGTGAT
CT0133099      --> ..................................................
CT0135965      --> TCACCACACACCTTGTAATTCACTTGGCCGAAGACATGCGCTGCAGTGAT
CT0136692      --> TCACCACACACCTTGTAATTCACTTGGCCGAAGACATGCGCTGCAGTGAT
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               201    -    251
RU22949        --> TGAATCCAGCTACCTGAAGGACCTACTTTATT-GCCATGTCCGTGACTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- TGAATCCAGCTACCTGAAGGACCTACTTTATT-GCCATGTCCGTGACTAG
RH13J90        <-- TGAATCCAGCTACCTGAAGGACCTACTTTATT-GCCATGTCCGTGACTAG
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> TGAATCCAGCTACCTGAAGGACCTACTTTATT-GCCATGTCCGTGACTAG
CT0132309      --> TGAATCCAGCTACCTGAAGGACCTACTTTATT-GCCATGTCCGTGACTAG
CT0132704      --> TGAATCCAGCTACCTGAAGGACCTACTTTATT-GCCATGTCCGTGACTAG
CT0133099      --> ..................................................
CT0135965      --> TGAATCCAGCTACCTGAAGGACCTACTTTATT-GCCATGTCCGTGACTAG
CT0136692      --> TGAATCCAGCTACCTGAAGGACCTACTTTATTTGCCATGTCCGTGACTAG
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               251    -    301
RU22949        --> TGTTTGCAGTTTCAGCAGGCAAAA-GAGGTTT-GGAGTGATTCCTTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- TGCTTGCAGTTTCAGCAGGCAAAA-GAGGTTT-GGAGTGATTCCTTCTTG  WaterDS
RH13J90        <-- TGCTTGCAGTTTCAGCAGGCAAAA-GAGGTTT-GGAGTGATTCCTTCTTG  WaterDS
ET0017726      <-- ..................................................  Ethylene
CT0040517      <-- ..................................................  Control
CT0131709      --> ..................................................  Control
CT0131909      --> TGTTTGCAGTTTCAGCAGGCAAAA-GAGGTTT-GGAGTGATTCCTTCTTG  Control
CT0132309      --> TGTTTGCAGTTTCAGCAGGCAAAAAGAGGTTT-GGAGTGATTCCTTCTTG  Control
CT0132704      --> TGTTTGCAGTTTCAGCAGGCAAAA-GAGGTTT-GGAGTGATTCCTTCTTG  Control
CT0133099      --> ..................................................  Control
CT0135965      --> TGTTTGCAGTTTCAGCAGGCAAAAAGAGGTTT-GGAGTGATTCCTTCTTG  Control
CT0136692      --> TGTTTGCAGTTTCAGCAGGCAAAAAGAGGTTTTGGAGTGATTCCTTCTTG  Control
CT0138904      --> ..................................................  Control
CT0085942      --> ..................................................  Control
CT0025794      --> ..................................................  Control
CT0023116      --> ..................................................  Control
RH41BH2        --> ..................................................  WaterDS
CT0065279      --> ..................................................  Control
CT0136089      --> ..................................................  Control
CT0018244      --> ..................................................  Control
CT0029750      --> ..................................................  Control
CT0052303      --> ..................................................  Control
ET0118079      --> ..................................................  Ethylene
ET0122691      --> ..................................................  Ethylene
ET0123878      --> ..................................................  Ethylene
ET0024677      --> ..................................................  Ethylene

               301    -    351
RU22949        --> AGGTGCCAGAAAA-TGACGTAGACGGAGGTGTGTATGCTTCAGGTGCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- AGGTGCCAGAAAA-TGACGTAGACGGAGGTGTGTATGCTTCAGGTGCAAT
RH13J90        <-- AGGTGCCAGAAAA-TGACGTAGACGGAGGTGTGTATGCTTCAGGTGCAAT
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> AGGTGCCAGAAAA-TGACGTAGACGGAGGTGTGTATGCTTCAGGTGCAAT
CT0132309      --> AGGTGCCAGAAAA-TGACGTAGACGGAGGTGTGTATGCTTCAGGTGCAAT
CT0132704      --> AGGTGCCAGAAAA-TGACGTAGACGGAGGTGTGTATGCTTCAGGTGCAAT
CT0133099      --> ..................................................
CT0135965      --> AGGTGCCAGAAAA-TGACGTAGACGGAGGTGTGTATGCTTCAGGTGCAAT
CT0136692      --> AGGTGCCAGAAAAATGACGTAGACGGAGGTGTGTATGCTTCAGGTGCAAT
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               351    -    401
RU22949        --> ATTCTTTTCAAGAGGATTATCGTAATTTAAGTTCCTGCTTGTTGGTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ATTCTTTTCAAGAGGATTATCGTAATTTAAGTTCCTGCTTGTTGGTGGTT
RH13J90        <-- ATTCTTTTCAAGAGGATTATCGTAATTTAAGTTCCTGCTTGTTGGTGGTT
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ATT...............................................
CT0132309      --> AT................................................
CT0132704      --> ATT...............................................
CT0133099      --> ..................................................
CT0135965      --> ATTt..............................................
CT0136692      --> ATTt..............................................
CT0138904      --> ..................................................
CT0085942      --> ........CAAGAGGATTATCGTAATTTAAGTTCCTGCTTGTTGGTGGTT
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               401    -    451
RU22949        --> TAAATTGCATCCGGACCCCTGGACCAGTGGCATTGCTTGATTTAATTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- TAAATTGCATCCGGACCCCTGGACCAGTGGCATTGCTTGATTTAATTCGA
RH13J90        <-- TAAATTGCATCCGGACCCCTGGACCAGTGGCATTGCTTGATTTAATTCGA
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> TAAATTGCATCCGGACCCCTGGACCAGTGGCATTGCTTGATTTAATTCGA
CT0025794      --> ..........................GTGGCATTGCTTGATTTAATTCGA
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               451    -    501
RU22949        --> TCCGTCACCTCAGATGGATAAGTAGCACTAGCACCTCCTTGATGATTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- TCCGTCACCTCAGATGGATAAGTAGCACTAGCACCTCCTTGATGATTATC
RH13J90        <-- TCCGTCACCTCAGATGGATAAGTAGCACTAGCACCTCCTTGATGATTATC
ET0017726      <-- ..................TAAGTAGCACTAGCACCTCCTTGATGATTATC
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> TCCGTCACCTCAGATGGATAAGTAGCACTAGCACCTCCTTGATGATTATC
CT0025794      --> TCCGTCACCTCAGATGGATAAGTAGCACTAGCACCTCCTTGATGATTATC
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               501    -    551
RU22949        --> TACATTCATTGGCATTGCACGACTGTTGCTTCCTCCAGGACCCGGGGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- TACATTCATTGGCATTGCACGACTGTTGCTTCCTCCAGGACCCGGGGGTA
RH13J90        <-- TACATTCATTGGCATTGCACGACTGTTGCTTCCTCCAGGACCCGGGGGTA
ET0017726      <-- TACATTCATTGGCATTGCACGACTGTTGCTTCCTCCAGGACCCGGGGGTA
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> TACATTCATTGGCATTGCACGACTGc........................
CT0025794      --> TACATTCATTGGCATTGCACGACTGTTGCTTCCTCCAGGACCCGGGGGTA
CT0023116      --> ...ATTCATTGGCATTGCACGACTGTTGCTTCCTCCAGGACCCGGGGGTA
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               551    -    601
RU22949        --> ACTGAGACTGAGGTCTATTCTTTTGCGATTGTTGGTACTTTATGATGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ACTGAGACTGAGGTCTATTCTTTTGCGATTGTTGGT..............
RH13J90        <-- ACTGAGACTGAGGTCTATTCTTTTGCGATTGTTGGT..............
ET0017726      <-- ACTGAGACTGAGGTCTATTCTTTTGCGATTGTTGGTACTTTATGATGGTC
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ACTGAGACTGAGGTCTATTCTTTTGCGATTGTTGGTACTTTATGATGGTC
CT0023116      --> ACTGAGACTGAGGTCTATTCTTTTGCGATTGTTGGTACTTTATGATGGTC
RH41BH2        --> ....................................ACTTTATGATGGTC
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               601    -    651
RU22949        --> CAATCAAATATGTAATCAAATTCATATCCTTCACGAGTAAACAAGTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- CAATCAAATATGTAATCAAATTCATATCCTTCACGAGTAAACAAGTCTCG
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> CAATCAAATATGTAATCAAATTCATATCCTT...................
CT0023116      --> CAATCAAATATGTAATCAAATTCATATCCTTCACGAGTAAACAAGTCTCG
RH41BH2        --> CAATCAAATATGTAATCAAATTCATATCCTTCACGAGTAGACAAGTCTCG
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               651    -    701
RU22949        --> GAATAGACGTTTCAAGAATCCATAATCAGGTCGCTGATCAAATGTCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- GAATAGACGTTTCAAGAATCCATAATCAGGTCGCTGATCAAATGTCAGTG
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> GAATAGACGTTTCAAGAATCCATAATCAGGTCGCTGATCAAAT.......
RH41BH2        --> GAATAGACGTTTCAAGAATCCATAATCAGGTCGCTGATCAAATGTCAGTG
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               701    -    751
RU22949        --> AGTGGCAGTAATGGAAGTATGATGCGAACTCCACTGGGTGAGATTTGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- AGT...............................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> AGTGGCAGTAATGGAAGTATGATGCGAACTCCACTGGGTGAGATTTGCAC
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               751    -    801
RU22949        --> AGAACCTCAATAGGGGTTGATAACTTCTTCTCACAAATTTTGTCATATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> AGAACCTCAATAGGGGTTGATAACTTCTTCTCACAAATTTTGTCATATTT
CT0065279      --> ......................................TTTGTCATATTT
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               801    -    851
RU22949        --> TTGCTTTTTTGTGGCAGCTTTT-AAACCCTGCCATGGAAGGCTTCCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> TTGCTTTTTTGTGGCAGCTTTT-AAACCCTGCCATGGAAGGCTTCCTCTC
CT0065279      --> TTGCTTTTTTGTGGCAGCTTTT-AAACCCTGCCAAGGAAGGCTTCCTCTC
CT0136089      --> ..........GTGGCAGCTTTTTAAACCCTGCCATGGAAGGCTTCCTCTC
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               851    -    901
RU22949        --> AGAAAATATAGAAGAACATATCCAAGAGACTCCAAATCATCCCTCCGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> AGAAAATAAAGAAGAACATATCCAAGAGACTCCAAATCATCCCTCCGGCT
CT0065279      --> AGAAAATATAGAAGAACATATCCAAGAGACTCCAAATCATCCCTCCGGCT
CT0136089      --> AGAAAATATAGAAGAACATATCCAAGAGACTCCAAATCATCCCTCCGGCT
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               901    -    951
RU22949        --> TTGCTCAATTCCAAGATGAGTGTTGCAGCTAGCATAACGAGCAGTTCCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> TTGCTCAATTCCAAGATGAGTGTTGCAGCTAGCATAACGAGCAGTTCCTG
CT0065279      --> TTGCTCAATTCCAAGATGAGTGTTGCAGCTAGCATAACGAGCAGTTCCTG
CT0136089      --> TTGCTCAATTCCAAGATGAGTGTTGCAGCTAGCATAACGAGCAGTTCCTG
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               951    -   1001
RU22949        --> TCAAGTTTTTATTCTCCCTATAAGGAATGTGGCGATTGGTGGTGGAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> TCAAGTTTTTATTCTCCCTATAAGGAATGTGGCGATTGGTGGTGGAGTCC
CT0065279      --> TCAAGTTTTTTATCTCCCTATAA...........................
CT0136089      --> TCAAGTTTTTATTCTCCCTATAAGGAATGTGGCGATTGGTGGTGGAGTCC
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               1001   -   1051
RU22949        --> CGATATCTTTTTGCAAGGCCAAAATCAATTATGTAAACCTGATTTGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> CGATATCTTTTTGCAAGGCCAAAATCAATTATGTAAACCTGATTTGCTTT
CT0065279      --> ..................................................
CT0136089      --> CGATATCTTTTTGCAAGGCCAAAATCAATTATGTAAACCTGATTTGCTTT
CT0018244      --> .....TCTTTTTGCAAGGCCAAAATCAATTATGTAAACCTGATTTGCTTT
CT0029750      --> ....tTCTTTTTGCAAGGCCAAAATCAATTATGTAAACCTGATTTGCTTT
CT0052303      --> .....TCTTTTTGCAAGGCCAAAATCAATTATGTAAACCTGATTTGCTTT
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> ..................................................

               1051   -   1101
RU22949        --> TCTACCAAGACCCATAAGGAAGTTATCAGGTTTTATATCTCTATGCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> TCTACCAAGACCCATAAGGAAGTTATCAGGTTTTATATCTCTATGCAGAA
CT0065279      --> ..................................................
CT0136089      --> TCTACCAAGACCCATAAGGAAGTTATCAGGTTTTATATCTCTATGCAGAA
CT0018244      --> TCTACCAAGACCCATAAGGAAGTTATCAGGTTTTATATCTCTATGCAGAA
CT0029750      --> TCTACCAAGACCCATAAGGAAGTTATCAGGTTTTATATCTCTATGCAGAA
CT0052303      --> TCTACCAAGACCCATAAGGAAGTTATCAGGTTTTATATCTCTATGCAGAA
ET0118079      --> ..................GAAGTTATCAGGTTTTATATCTCTATGCAGAA
ET0122691      --> ..................GAAGTTATCAGGTTTTATATCTCTATGCAGAA
ET0123878      --> ..................GAAGTTATCAGGTTTTATATCTCTATGCAGAA
ET0024677      --> ..................................................

               1101   -   1151
RU22949        --> AACCTTTCGAGTGCACATATTCTATCCTCGTAATCATTTGATCAGCTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> AACCTTTCGAGTGCACATATTCTATCCTCGTAATCATTTGATCAGCCAAC
CT0065279      --> ..................................................
CT0136089      --> AACCTTTCGAGTGCACATATT.............................
CT0018244      --> AACCTTTCGAGTGCACATATTCTATCCTCGTAATCATTTGATCAGCTAAC
CT0029750      --> AACCTTTCGAGTGCACATATTCTATCCTCGTAATCATTTGATCAGCTAAC
CT0052303      --> AACCTTTCGAGTGCACATATTCTATCCTCGTAATCATTTGATCAGCTAAC
ET0118079      --> AACCTTTCGAGTGCACATATTCTATCCTCGTAATCATTTGATCAGCTAAC
ET0122691      --> AACCTTTCGAGTGCACATATTCTATCCTCGTAATCATTTGATCAGCTAAC
ET0123878      --> AACCTTTCGAGTGCACATATTCTATCCTCGTAATCATTTGATCAGCTAAC
ET0024677      --> ..................................................

               1151   -   1201
RU22949        --> AGCAAGACACTCTTGAGCGAAAACTTTCTCCCGCAATACACAAACAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ..................................................
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> AGCAAGACACTCTTGAGCGAAAACTTTCTCCCGCAATACACAAACAAATC
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> A.................................................
CT0029750      --> A.................................................
CT0052303      --> A.................................................
ET0118079      --> AGCAAGACACTCTTGAGCGAAAACTTTCTCCCGCAATACACAAACAAATC
ET0122691      --> AGCAAGACACTCTTGAGCGAAAACTTTCTCCCGCAATACACAAACAAATC
ET0123878      --> AGCAAGACACTCTTGAGCGAAAACTTTCTCCCGCAATACACAAACAAATC
ET0024677      --> ..................................................

               1201   -   1251
RU22949        --> CTCAAGACTTGGTCCCAGCAGATCAAGAACCAGCACATTGTCCTCGCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- ...........................AACCAGCACATTGTCCTCGCCGT
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> CTCAAGGCTTGGTCCCAGCAGATCAAGAACCAGCACATTGTCCTCGCCGT
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> CTCAAGACTTGGTCCCAGCAGATCAAGAACCAGCACATTGTCCTCGCCGT
ET0122691      --> CTCAAGACTTGGTCCCAGCAGATCAAGAACCAGCACATTGTCCTCGCCGT
ET0123878      --> CTCAAGACTTGGTCCCAGCAGATCAAGAACCAGCACATTGTCCTCGCCGT
ET0024677      --> ...AAGACTTGGTCCCAGCAGATCAAGAACCAGCACATTGTCCT-GCCGT

               1251   -   1301
RU22949        --> CTATCCCCGACCATTTTATGCTCGGAATACCACTTCCTCCTTGAAGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- CTATCCCCGACCATTTTATGCTCGGAATACCACTTCCTCCTTGAAGCGTA
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> CTATCCCCGACCATTTTATGCTCGGAATACCACTTCCTCCTTGAAGCGTA
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> CTATCCCCGACCATTTTATGCTCGGAATACCACTTCCTCCTTGAAGCGTA
ET0122691      --> CTATCCCCGACCATTTTATGCTCGGAATACCACTTCCTCCTTGAAGCGTA
ET0123878      --> CTATCCCCGACCATTTTATGCTCGGAATACCACTTCCTCCTTGAAGCGTA
ET0024677      --> CTATCCCCGACCATTTTATGCTCGGAATACCACTTCCTCCTTGAAGCGTA

               1301   -   1351
RU22949        --> TGGTACAGCTTGGCCTCATACAGCAACTGTGGATGCTTCGTCTTACTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- TGGTACAGCTTGGCCTCATACAGCAACTGTGGATGCTTCGTCTTACTGTT
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> TGGT..............................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> TGGTA.............................................
ET0122691      --> TGGTACAG..........................................
ET0123878      --> TGGTACAG..........................................
ET0024677      --> TGGTACAGCTTGGCCTCATACAGCAACTGTGGATGCTTCGTCTTACTGTT

               1351   -   1401
RU22949        --> CTCGATCTTAACAGCGACGATCTCGAACGTGTCCACGTGAGTAGCTAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
RH10F22        <-- ..................................................
RH13J90        <-- ..................................................
ET0017726      <-- ..................................................
CT0040517      <-- CTCGATCTTAACAGCGACGATCTCGAACGTGTCCACGTGAGTAGCTAGAA
CT0131709      --> ..................................................
CT0131909      --> ..................................................
CT0132309      --> ..................................................
CT0132704      --> ..................................................
CT0133099      --> ..................................................
CT0135965      --> ..................................................
CT0136692      --> ..................................................
CT0138904      --> ..................................................
CT0085942      --> ..................................................
CT0025794      --> ..................................................
CT0023116      --> ..................................................
RH41BH2        --> ..................................................
CT0065279      --> ..................................................
CT0136089      --> ..................................................
CT0018244      --> ..................................................
CT0029750      --> ..................................................
CT0052303      --> ..................................................
ET0118079      --> ..................................................
ET0122691      --> ..................................................
ET0123878      --> ..................................................
ET0024677      --> CTCGATCTTAACAG....................................

               1401   -   1451
RU22949        --> AGATTTCACCGAAC
                   ~~~~~~~~~~~~~~
RH10F22        <-- ..............
RH13J90        <-- ..............
ET0017726      <-- ..............
CT0040517      <-- AGATTTCACCGAAC
CT0131709      --> ..............
CT0131909      --> ..............
CT0132309      --> ..............
CT0132704      --> ..............
CT0133099      --> ..............
CT0135965      --> ..............
CT0136692      --> ..............
CT0138904      --> ..............
CT0085942      --> ..............
CT0025794      --> ..............
CT0023116      --> ..............
RH41BH2        --> ..............
CT0065279      --> ..............
CT0136089      --> ..............
CT0018244      --> ..............
CT0029750      --> ..............
CT0052303      --> ..............
ET0118079      --> ..............
ET0122691      --> ..............
ET0123878      --> ..............
ET0024677      --> ..............