1 - 51
RU23313 --> CAGTGCCCAGCATGTTGGGATATGAGAGGCCAAAGGAAA-CCCCATGATA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048781 --> CAGTGCCCAGCATGTTGGGATATGAGAGGCCAAAGGAAAACCCCATGATA
CT0066078 --> CAGTGCCCAGCATGTTGGGATATGAGAGGCCAAAGGAAA-CCCCATGATA
CT0070192 --> CAGTGCCCAGCATGTTGGGATATGAGAGGCCAAAGGAAA-CCCCATGATA
RH12I126 --> ..................................................
RH15L107 --> ..................................................
51 - 101
RU23313 --> TGATAGCCCCAAGAAGTACTGAGCAGTTGACTATGTGAGGGCAAATGAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048781 --> TGATAGCCCCAAGAAGTACTGAGCAGTTGACTATGTGAGGGCAAATAAGA Control
CT0066078 --> TGATAGCCCCAAGAAGTACTGAGCAGTTGACTATGTGAGGGCAAATAAGA Control
CT0070192 --> TGATAGCCCCAAGAAGTACTGAGCAGTTGACTATGTGAGGGCAAATAAGA Control
RH12I126 --> .................ACTGAGCAGTTGACTATGTGAGGGCAAATGAGA WaterDS
RH15L107 --> .................ACTGAGCAGTTGACTATGTGAGGGCAAATGAGA WaterDS
101 - 151
RU23313 --> CCACATCCGACATAAGTAGGACTGAAGTCGAAATAAAACGTGTTCTTAAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048781 --> CCACATCCGACATAAGTAGGACTGAAGTCGAAATAAAACGTGTTCTTAAA
CT0066078 --> CCACATCCGACATAAGTAGGACTGAAGTCGAAATAAAACGTGTTCTTAAA
CT0070192 --> CCACATCCGACATAAGTAGGACTGAAGTCGAAATAAAACGTGTTCTTAAA
RH12I126 --> CCACATCCGACATAAGTAGGACTGAAGTCGAAATAAAACGTGTTCTTAAA
RH15L107 --> CCACATCCGACATAAGTAGGACTGAAGTCGAAATAAAACGTGTTCTTAAA
151 - 201
RU23313 --> AAGTGTCAATCCAAGGCTAGGAAAGTTGTCAAACCCACATGAATCTCCAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048781 --> AAGTGTCAATCCAAGGCTAGGAAAGTTGTCAAACCCACATGAATCTCCAA
CT0066078 --> AAGTGTCAATCCAAGGCTAGGAAAGTTGTCAAACCCACATGAATCTCCAA
CT0070192 --> AAGTGTCAATCCAAGGCTAGGAAAGTTGTCAAACCCACATGAATCTCCAA
RH12I126 --> AAGTGTCAATCCAAGGCTAGGAAAGTTGTCAAACCCACATGAATCTCCAA
RH15L107 --> AAGTGTCAATCCAAGGCTAGGAAAGTTGTCAAACCCACATGAATCTCCAA
201 - 251
RU23313 --> TACCACTGAAGAACCACTTAAAGCAGCT-CCAAATTAAACTCATGCTTAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048781 --> TACCACTGAAGAACCACTTAAAGCAGCT-CCAAATTAAACTCATGCTT.. Control
CT0066078 --> TACCACTGAAGAACCACTTAAAGCAGCTACCAAATTAAACTCATGCTTta Control
CT0070192 --> TACCACTGAAGAACCACTTAAAGCAGCT-CCAAATTAA-CTCATGCTTta Control
RH12I126 --> TACCACTGAAAAACCACTTAAAGCAGCT-CCAAATTAAACTCATGCTTAA WaterDS
RH15L107 --> TACCACTGAAAAACCACTTAAAGCAGCT-CCAAATTAAACTCATGCTTAA WaterDS
251 - 301
RU23313 --> ATACTTTCCAAGACATTGCACTTGCTTCCTGCAATAAAAAGAGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
CT0048781 --> ............................................
CT0066078 --> aa..........................................
CT0070192 --> aa..........................................
RH12I126 --> ATACTTTCCAAGACATTGCACTTGCTTCCTGCAATAAAAAGAGT
RH15L107 --> ATACTTTCCAAGACATTGCACTTGCTTCCTGCAATAAAAAGAGT
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